Di-n-butyl phthalate stress induces changes in the core bacterial community associated with nitrogen conversion during agricultural waste composting

Esterase-mediated degradation of dibutyl and diethylhexyl phthalates in aqueous and soil systems

Phthalate esters (PAEs), widely used as plasticizers, pose severe environmental and health risks. This study investigated the enzymatic hydrolysis of PAE congeners (dibutyl phthalate (DBP) and diethylhexyl phthalate (DEHP)) in aqueous and soil systems using Bacillus subtilis esterase and a new thermoalkaliphilic Geobacillus sp. esterase. A novel esterase secreted from Geobacillus sp. which was isolated from a geothermal region (Türkiye) was expressed in E.coli and purified. Geobacillus sp. esterase was able to degrade almost 30% of DBP and 40% of DEHP (100 mg/L) in the aqueous system within 336 h, while it degraded virtually 59% and 98% of DBP in agricultural area soil (soil-1) and forest area soil (soil-2), respectively, at the same time. To compare with Geobacillus sp. esterase, Bacillus subtilis esterase was used, which fully degraded DBP with 100 mg/L in the soil-1 and soil-2 for 72 h and 2 h, respectively. The performances of both esterases to degrade DEHP (100 mg/L) were similar in soil-1 (∼35%) and soil-2 (∼50%) for 336 h. Soil characteristics significantly influenced PAE degradation. Compared to that in the aqueous system, Geobacillus sp. esterase in soil systems had a higher degradation efficiency. This was likely due to its origin from a soil microorganism. Variations in the degradation ability of two enzymes most probably arose from substrate specificities and enzyme dynamics. Molecular docking results showed that DBP had a higher affinity to both enzymes than DEHP. Overall, this study offers important evidence that Bacillus subtilis esterase and Geobacillus sp. esterase are effective biocatalysts for removing the pollutants with ester bonds in the environment.

Confirming the key factors influencing the biosynthesis and regulation of organic nitrogen in composting

Organic nitrogen (ON) possesses the ability to sustain a stable nitrogen supply fertility during composting. However, research on the biosynthesis and regulation of ON remains limited. The results indicated that despite variations in microbial communities between the chicken manure composting (T group) and kitchen waste digestate composting (F group), their functional genes were remarkably similar, and the microorganisms exhibited similar functions. The microbial community structure of T group was more complex than that of F group. Network analysis identified Saccharomonospora, Corynebacterium, and Thermobifida as the core microorganisms in T group, whereas Oceanobacillus, Staphylococcus, and Fictibacillus were predominant in F group. These microorganisms play a role in the biosynthesis and regulation of various forms of ON (including amino acid nitrogen (AAN), amino sugar nitrogen (ASN), amide nitrogen (AN) and hydrolyzable unknown nitrogen (HUN)) and may contribute to differences in ON production due to the distinct nature of the materials. The core functional genes of the two groups of materials were determined by random forest model. Although differences in functional genes were present between F group and T group, the most crucial genes for ON biosynthesis in both groups were those with ammonia assimilation (such as glnE, gltB, gltD, etc.). The nitrogen transformation processes associated with these core genes can be modulated by managing the activity of multifunctional microorganisms, particularly through the control of ammonia assimilation, nitrate reduction, and ammonification, which are related to NH4+ levels. Notably, electric conductivity (EC), temperature (Tem.), pH, and NH4+ were the pivotal environmental factors influencing the biosynthesis of ON. This investigation enhances our understanding of the previously underexplored mechanisms of ON biosynthesis and regulation.

Landfill leachates as a significant source for emerging pollutants of phthalic acid esters: Identification, occurrence, characteristics, fate, and transport

Phthalic acid esters (PAEs) are byproducts released from various sources, including microplastics, cosmetics, personal care products, pharmaceuticals, waxes, inks, detergents, and insecticides. This review article provides an overview of the literature on PAEs in landfill leachates, exploring their identification, occurrence, characteristics, fate, and transport in landfills across different countries. The study emphasizes the influence of these substances on the environment, especially on water and soil. Various analytical techniques, such as GC-MS, GC-FID, and HPLC, are commonly employed to quantify concentrations of PAEs. Studies show significant variations in levels of PAEs among different countries, with the highest concentration observed in landfill leachates in Brazil, followed by Iran. Among the different types of PAE, the survey highlights DEHP as the most concentrated PAE in the leachate, with a concentration of 89.6 μg/L. The review also discusses the levels of other types of PAEs. The data shows that DBP has the highest concentration at 6.8 mg/kg, while DOP has the lowest concentration (0.04 mg/kg). The concentration of PAEs typically decreases as the depth in the soil profile increases. In older landfills, concentrations of PAE decrease significantly, possibly due to long-term degradation and conversion of PAE into other chemical compounds. Future research should prioritize evaluating the effectiveness of landfill liners and waste management practices in preventing the release of PAE and other pollutants into the environment. It is also possible to focus on developing efficient physical, biological, and chemical methods for removing PAEs from landfill leachates. Additionally, the effectiveness of existing treatment processes in removing PAEs from landfill leachates and the necessity for new treatment processes can be considered.

Biodiversity and core microbiota of key-stone ecological clusters regulate compost maturity during cow-dung-driven composting

The primary objectives of this study were to explore the community-level succession of bacteria, fungi, and protists during cow-dung-driven composting and to elucidate the contribution of the biodiversity and core microbiota of key-stone microbial clusters on compost maturity. Herein, we used high-throughput sequencing, polytrophic ecological networks, and statistical models to visualize our hypothesis. The results showed significant differences in the richness, phylogenetic diversity, and community composition of bacteria, fungi, and eukaryotes at different composting stages. The ASV191 (Sphingobacterium), ASV2243 (Galibacter), ASV206 (Galibacter), and ASV62 (Firmicutes) were the core microbiota of key-stone bacterial clusters relating to compost maturity; And the ASV356 (Chytridiomycota), ASV470 (Basidiomycota), and ASV299 (Ciliophora) were the core microbiota of key-stone eukaryotic clusters relating to compost maturity based on the data of this study. Compared with the fungal taxa, the biodiversity and core microbiota of key-stone bacterial and eukaryotic clusters contributed more to compost maturity and could largely predict the change in the compost maturity. Structural equation modeling revealed that the biodiversity of total microbial communities and the biodiversity and core microbiota of the key-stone microbial clusters in the compost directly and indirectly regulated compost maturity by influencing nutrient availability (e.g., NH4+-N and NO3--N), hemicellulose, humic acid content, and fulvic acid content, respectively. These results contribute to our understanding of the biodiversity and core microbiota of key-stone microbial clusters in compost to improve the performance and efficiency of cow-dung-driven composting.

Incorporating microbial inoculants to reduce nitrogen loss during sludge composting by suppressing denitrification and promoting ammonia assimilation

To address the challenge of increasing nitrogen retention in compost, this study investigated the effects of microbial communities on denitrification and ammonia assimilation during sludge composting by inoculating microbial inoculants. The results showed that the retention rates of total Kjeldahl nitrogen (TKN) and humic acid (HA) in MIs group (with microbial inoculants) were 4.94 % and 18.52 % higher than those in the control group (CK), respectively. Metagenomic analysis showed that Actinobacteria and Proteobacteria were identified as main microorganisms contributing to denitrification and ammonia assimilation. The addition of microbial agents altered the structure of the microbial community, which in turn stimulated the expression of functional genes. During cooling period, the ammonia assimilation genes glnA, gltB and gltD in MIs were 15.98 %, 24.84 % and 32.88 % higher than those in CK, respectively. Canonical correspondence analysis revealed a positive correlation between the dominant bacterial genera from the cooling stage to the maturity stage and the levels of NO3--N, NH4+-N, HA, and TKN contents. NH4+-N was positively correlated with HA, indicating NH4+-N might be incorporated into HA. Heat map and network analyses revealed NH4+-N as a key factor affecting functional genes of denitrification and ammonia assimilation, with Nitrospira identified as the core bacteria in the microbial network. Therefore, the addition of microbial agents could increase nitrogen retention and improve compost product quality.

Mechanism of magnetite-assisted aerobic composting on the nitrogen cycle in pig manure

Magnetite affects nitrogen cycle of pig manure (PM) biostabilisation was investigated. Various doses of magnetite (0 % (T1); 2.5 % (T2); 5 % (T3); 7.5 % (T4)) were homogeneously added into PM and wolfberry branch fillings (BF) mixture for a 50-day composting. Compared to T1, total nitrogen (TN) loss in gaseous form increased remarkably by 17.51 %, 56.31 %, and 24.91 %, respectively, in T2-T4. In particular, T3 dramatically increased the cumulative N2O emission but decreased NH3 emissions. However, T2 and T3 enhanced the total nitrogen contents by 7.24 % and 3.09 %. Structural equation models (SEM) analysis indicated that magnetite addition increased the direct and indirect pathways of N2O emission. Further analysis revealed that Ruminofilibacter and N2O emission were significantly correlated, and Pseudomonas played a vital role in nitrogen preservation. Although using 2 % magnetite as an additive could increase the TN content, the obvious increase of N2O emission should be considered in engineering practice.

Influence of leachate microenvironment on the occurrence of phthalate esters in landfills

Phthalate esters (PAEs) are added to various products as plasticizers. Plastic waste containing PAEs enters landfills as they age with use. However, the influence of microenvironmental changes on the occurrence of PAEs during landfill stabilization is still unknown. In this study, we evaluated the relationship between the physical and chemical properties of leachate, the structure of bacterial communities and the chemical structure of dissolved organic matter (DOM), and the occurrence of PAEs and the mechanism underlying their responses to changes. Landfill leachate in different stabilization states had high Cl- and NH4+ contents and its metal element (Cr, Pb, and Zn) contents generally decreased with the increase in landfill ages. Proteobacteria, Bacteroidetes, and Firmicutes were important phyla and had an average relative abundance of 68.63%. The lignin/carboxylate-rich alicyclic molecule structure was the main component of DOM (56%-64%). Of the 6-priority controlled PAEs in leachate, di-n-butyl phthalate was the most abundant (1046 μg L-1), while butyl phthalate was not detected. The results showed that pH, the relative abundance of Chloroflexi, and the value of SUVA254 can directly influence the occurrence of PAEs in leachate. The positive and negative effects vary depending on the PAE content and molecular weight. DBP and DEHP have higher environmental risks in the aquatic system. These results are intended to provide a scientific basis for the evolutionary characterization of the microenvironment in complex environmental systems and the control of novel contaminants, such as PAEs.

Combined effects of amoxicillin and copper on nitrogen transformation and the microbial mechanisms during aerobic composting of cow manure

Pollutants in livestock manure have a compound effect during aerobic composting, but research to date has focused more on single factors. This study investigated the effects of adding amoxicillin (AMX), copper (Cu) and both (ACu) on nitrogen transformation and the microbial mechanisms in cow manure aerobic composting with wheat straw. In this study, compared with CK, AMX, Cu, and ACu increased NH₃ cumulative emissions by 32.32%, 41.78% and 8.32%, respectively, due to their inhibition of ammonia oxidation. Coexisting AMX and Cu decreased the absolute abundances of amoA/ nxrA genes and increased the absolute abundances of nirS /nosZ genes, but they had an antagonistic effect on the changes in functional gene abundances. Pseudomonas and Luteimonas were enriched during the thermophilic and cooling periods due to the addition of AMX and ACu, which enhanced denitrification in these two groups. Moreover, adding AMX and/or Cu led to more complex bacterial networks, but the effect of the two pollutants was lower than those of the individual pollutants. These findings provide theoretical and experimental support for controlling typical combined pollution with antibiotics and heavy metals in livestock manure.