An unlikely DNA cleaving agent: A photo-active trinuclear Cu(II) complex based on hexaazatriphenylene

Single-Photon DNA Photocleavage up to 905 nm by a Benzylated 4-Quinolinium Carbocyanine Dye

This paper describes the DNA interactions of near-infrared (NIR) benzylated 4-quinolinium dicarbocyanine dyes containing a pentamethine bridge meso-substituted either with a bromine (4) or hydrogen (5) atom. In pH 7.0 buffered aqueous solutions, the 4-quinolinium dyes absorb light that extends into the near-infrared range up to ∼950 nm. The unique direct strand breakage of pUC19 DNA that is sensitized by irradiating either dicarbocyanine with an 850 nm LED laser constitutes the first published example of DNA photocleavage upon single-photon chromophore excitation at a wavelength greater than 830 nm. Brominated dye 4, which is more stable than and achieves DNA strand scission in higher yield than its hydrogen-bearing counterpart 5, cleaves plasmid DNA under 830 and 905 nm laser illumination. The addition of increasing amounts of DNA to aqueous pH 7.0 solutions converted an aggregated form of dye 4 to a monomer with bathochromic absorption that overlaps all three laser emission wavelengths. No induced circular dichroism and fluorescence signals were detected when DNA was present, pointing to possible external binding of the dye to the DNA. Experiments employing radical-specific fluorescent probes and chemical additives showed that brominated dye 4 likely breaks DNA strands by photosensitizing hydroxyl radical production. Micromolar concentrations of the dye were relatively nontoxic to cultured Escherichia coli cells in the dark but dramatically reduced survival of the cells under 830 nm illumination. As NIR light wavelengths deeply penetrate biological tissues, we envisage the future use of carbocyanine dyes as a sensitizing agent in phototherapeutic applications.

Single photon DNA photocleavage at 830 nm by quinoline dicarbocyanine dyes

We have synthesized symmetrical carbocyanine dyes in which two 4-quinolinium rings are joined by a pentamethine bridge that is meso-substituted with H or Cl. Irradiation of the halogenated dye at 830 nm produces hydroxyl radicals that generate DNA direct strand breaks. This represents the first reported example of DNA photocleavage upon single photon excitation of a chromophore at wavelengths above 800 nm.

Structural and functional study for tRNA cleavage by Glycine o-phenanthroline CuII complex, [CuCl(phen)(gly)]∙4H2O

The o-phenanthroline gly Cu(II) complex, [CuCl(phen)(gly)]∙4H₂O 1, has been prepared and structurally characterized. The transfer RNA binding and degradation properties of complex 1 have been investigated by UV-vis spectroscopy, cyclic voltammetry (CV), capillary electrophoresis (CE) and atomic force microscopy (AFM) methods. The results showed that 1 can efficiently cleave tRNA in the physiological conditions (pH 7.0, and 37 °C), and has a digestion coefficient nearly up to 100% within 75 h. AFM image for 1/RNA exhibited arrayed tandem repetitions of tRNA segments. This study is targeting the destruction of the high-order structures of genetic biomacromolecules which paves an important way to novel materials for the decontamination of microorganisms (e.g., bacteria and viruses).

Impact of nuclearity and topology on the single molecule magnet behaviour of hexaazatrinaphtylene-based cobalt complexes

A hexaazatrinaphtylene-based transition metal complex that exhibits single molecule magnet behaviour is reported herein. This study reveals the influence of both nuclearity and topology on the magnetic properties of hexaazatrinaphtylene-based complexes.