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Struck B, Wiersma SJ, Ortseifen V, Pühler A, Niehaus K. Comprehensive Proteome Profiling of a Xanthomonas campestris pv. Campestris B100 Culture Grown in Minimal Medium with a Specific Focus on Nutrient Consumption and Xanthan Biosynthesis. Proteomes 2024; 12:12. [PMID: 38651371 PMCID: PMC11036225 DOI: 10.3390/proteomes12020012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2024] [Revised: 03/22/2024] [Accepted: 03/28/2024] [Indexed: 04/25/2024] Open
Abstract
Xanthan, a bacterial polysaccharide, is widespread in industrial applications, particularly as a food additive. However, little is known about the process of xanthan synthesis on the proteome level, even though Xanthomonas campestris is frequently used for xanthan fermentation. A label-free LC-MS/MS method was employed to study the protein changes during xanthan fermentation in minimal medium. According to the reference database, 2416 proteins were identified, representing 54.75 % of the proteome. The study examined changes in protein abundances concerning the growth phase and xanthan productivity. Throughout the experiment, changes in nitrate concentration appeared to affect the abundance of most proteins involved in nitrogen metabolism, except Gdh and GlnA. Proteins involved in sugar nucleotide metabolism stay unchanged across all growth phases. Apart from GumD, GumB, and GumC, the gum proteins showed no significant changes throughout the experiment. GumD, the first enzyme in the assembly of the xanthan-repeating unit, peaked during the early stationary phase but decreased during the late stationary phase. GumB and GumC, which are involved in exporting xanthan, increased significantly during the stationary phase. This study suggests that a potential bottleneck for xanthan productivity does not reside in the abundance of proteins directly involved in the synthesis pathways.
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Affiliation(s)
- Ben Struck
- Department of Biology, Bielefeld University, Universitätsstraße 25, D-33615 Bielefeld, Germany (S.J.W.)
- Center for Biotechnology (CeBiTec), Bielefeld University, Universitätsstraße 27, D-33615 Bielefeld, Germany;
| | - Sanne Jitske Wiersma
- Department of Biology, Bielefeld University, Universitätsstraße 25, D-33615 Bielefeld, Germany (S.J.W.)
- Center for Biotechnology (CeBiTec), Bielefeld University, Universitätsstraße 27, D-33615 Bielefeld, Germany;
| | - Vera Ortseifen
- Department of Biology, Bielefeld University, Universitätsstraße 25, D-33615 Bielefeld, Germany (S.J.W.)
- Center for Biotechnology (CeBiTec), Bielefeld University, Universitätsstraße 27, D-33615 Bielefeld, Germany;
| | - Alfred Pühler
- Center for Biotechnology (CeBiTec), Bielefeld University, Universitätsstraße 27, D-33615 Bielefeld, Germany;
| | - Karsten Niehaus
- Department of Biology, Bielefeld University, Universitätsstraße 25, D-33615 Bielefeld, Germany (S.J.W.)
- Center for Biotechnology (CeBiTec), Bielefeld University, Universitätsstraße 27, D-33615 Bielefeld, Germany;
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Wu M, Shi Z, Ming Y, Zhao Y, Gao G, Li G, Ma T. The production of ultrahigh molecular weight xanthan gum from a Sphingomonas chassis capable of co-utilising glucose and xylose from corn straw. Microb Biotechnol 2024; 17:e14394. [PMID: 38226955 PMCID: PMC10884872 DOI: 10.1111/1751-7915.14394] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2023] [Revised: 11/23/2023] [Accepted: 12/19/2023] [Indexed: 01/17/2024] Open
Abstract
Corn straw is an abundant and renewable alternative for microbial biopolymer production. In this paper, an engineered Sphingomonas sanxanigenens NXG-P916 capable of co-utilising glucose and xylose from corn straw total hydrolysate to produce xanthan gum was constructed. This strain was obtained by introducing the xanthan gum synthetic operon gum as a module into the genome of the constructed chassis strain NXdPE that could mass produce activated precursors of polysaccharide, and in which the transcriptional levels of gum genes were optimised by screening for a more appropriate promoter, P916 . As a result, strain NXG-P916 produced 9.48 ± 0.34 g of xanthan gum per kg of fermentation broth (g/kg) when glucose was used as a carbon source, which was 2.1 times improved over the original engineering strain NXdPE::gum. Furthermore, in batch fermentation, 12.72 ± 0.75 g/kg xanthan gum was produced from the corn straw total hydrolysate containing both glucose and xylose, and the producing xanthan gum showed an ultrahigh molecular weight (UHMW) of 6.04 × 107 Da, which was increased by 15.8 times. Therefore, the great potential of producing UHMW xanthan gum by Sphingomonas sanxanigenens was proved, and the chassis NXdPE has the prospect of becoming an attractive platform organism producing polysaccharides derived from biomass hydrolysates.
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Affiliation(s)
- Mengmeng Wu
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, College of Life SciencesNankai UniversityTianjinChina
| | - Zhuangzhuang Shi
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, College of Life SciencesNankai UniversityTianjinChina
| | - Yue Ming
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, College of Life SciencesNankai UniversityTianjinChina
| | - Yufei Zhao
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, College of Life SciencesNankai UniversityTianjinChina
| | - Ge Gao
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, College of Life SciencesNankai UniversityTianjinChina
| | - Guoqiang Li
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, College of Life SciencesNankai UniversityTianjinChina
| | - Ting Ma
- Key Laboratory of Molecular Microbiology and Technology, Ministry of Education, College of Life SciencesNankai UniversityTianjinChina
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Balíková K, Farkas B, Matúš P, Urík M. Prospects of Biogenic Xanthan and Gellan in Removal of Heavy Metals from Contaminated Waters. Polymers (Basel) 2022; 14:polym14235326. [PMID: 36501719 PMCID: PMC9737242 DOI: 10.3390/polym14235326] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2022] [Revised: 11/29/2022] [Accepted: 11/30/2022] [Indexed: 12/12/2022] Open
Abstract
Biosorption is considered an effective technique for the treatment of heavy-metal-bearing wastewaters. In recent years, various biogenic products, including native and functionalized biopolymers, have been successfully employed in technologies aiming for the environmentally sustainable immobilization and removal of heavy metals at contaminated sites, including two commercially available heteropolysaccharides-xanthan and gellan. As biodegradable and non-toxic fermentation products, xanthan and gellan have been successfully tested in various remediation techniques. Here, to highlight their prospects as green adsorbents for water decontamination, we have reviewed their biosynthesis machinery and chemical properties that are linked to their sorptive interactions, as well as their actual performance in the remediation of heavy metal contaminated waters. Their sorptive performance in native and modified forms is promising; thus, both xanthan and gellan are emerging as new green-based materials for the cost-effective and efficient remediation of heavy metal-contaminated waters.
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