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Furioso Ferreira R, Ghaffari MH, Ceciliani F, Fontana M, Caruso D, Audano M, Savoini G, Agazzi A, Mrljak V, Sauerwein H. Untargeted lipidomics reveals unique lipid signatures of extracellular vesicles from porcine colostrum and milk. PLoS One 2025; 20:e0313683. [PMID: 39946395 PMCID: PMC11825007 DOI: 10.1371/journal.pone.0313683] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2024] [Accepted: 10/30/2024] [Indexed: 02/16/2025] Open
Abstract
Extracellular vesicles (EV) are membranous vesicles considered as significant players in cell-to-cell communication. Milk provides adequate nutrition, transfers immunity, and promotes neonatal development, and milk EV are suggested to play a crucial role in these processes. Milk samples were obtained on days 0, 7, and 14 after parturition from sows receiving either a standard diet (ω-6:ω-3 = 13:1) or a test diet enriched in ω-3 (ω-6:ω-3 = 4:1). EV were isolated using ultracentrifugation coupled with size exclusion chromatography, and characterized by nanoparticle tracking analysis, transmission electron microscopy, and assessment of EV markers via Western blotting. The lipidome was determined following a liquid chromatography-quadrupole time-of-flight mass spectrometry approach. Here, we show that different stages of lactation (colostrum vs mature milk) have a distinct extracellular vesicle lipidomic profile. The distinct lipid content can be further explored to understand and regulate milk EV functionalities and primordial for enabling their diagnostic and therapeutic potential.
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Affiliation(s)
- Rafaela Furioso Ferreira
- Institute of Animal Science, Physiology Unit, University of Bonn, Bonn, Germany
- Faculty of Veterinary Medicine, University of Zagreb, Zagreb, Croatia
| | - Morteza H. Ghaffari
- Institute of Animal Science, Physiology Unit, University of Bonn, Bonn, Germany
| | - Fabrizio Ceciliani
- Department of Veterinary Medicine and Animal Sciences, Università degli Studi di Milano, Lodi, Italy
| | - Manuela Fontana
- Unitech OMICs, Università degli Studi di Milano, Milano, Italy
| | - Donatella Caruso
- Unitech OMICs, Università degli Studi di Milano, Milano, Italy
- Department of Pharmacological and Biomolecular Sciences, Università degli Studi di Milano, Milano, Italy
| | - Matteo Audano
- Unitech OMICs, Università degli Studi di Milano, Milano, Italy
| | - Giovanni Savoini
- Department of Pharmacological and Biomolecular Sciences, Università degli Studi di Milano, Milano, Italy
| | - Alessandro Agazzi
- Department of Pharmacological and Biomolecular Sciences, Università degli Studi di Milano, Milano, Italy
| | - Vladimir Mrljak
- Faculty of Veterinary Medicine, University of Zagreb, Zagreb, Croatia
| | - Helga Sauerwein
- Institute of Animal Science, Physiology Unit, University of Bonn, Bonn, Germany
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Shipton C, Aitken J, Atkinson S, Burchmore R, Hamilton R, Mactier H, McGill S, Millar E, Houtman AC. Tear Proteomics in Infants at Risk of Retinopathy of Prematurity: A Feasibility Study. Transl Vis Sci Technol 2024; 13:1. [PMID: 38691083 PMCID: PMC11077915 DOI: 10.1167/tvst.13.5.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2023] [Accepted: 01/25/2024] [Indexed: 05/03/2024] Open
Abstract
Purpose This feasibility study investigated the practicability of collecting and analyzing tear proteins from preterm infants at risk of retinopathy of prematurity (ROP). We sought to identify any tear proteins which might be implicated in the pathophysiology of ROP as well as prognostic markers. Methods Schirmer's test was used to obtain tear samples from premature babies, scheduled for ROP screening, after parental informed consent. Mass spectrometry was used for proteomic analysis. Results Samples were collected from 12 infants, which were all adequate for protein analysis. Gestational age ranged from 25 + 6 to 31 + 1 weeks. Postnatal age at sampling ranged from 19 to 66 days. One infant developed self-limiting ROP. Seven hundred one proteins were identified; 261 proteins identified in the majority of tear samples, including several common tear proteins, were used for analyses. Increased risk of ROP as determined by the postnatal growth ROP (G-ROP) criteria was associated with an increase in lactate dehydrogenase B chain in tears. Older infants demonstrated increased concentration of immunoglobulin complexes within their tear samples and two sets of twins in the cohort showed exceptionally similar proteomes, supporting validity of the analysis. Conclusions Tear sampling by Schirmer test strips and subsequent proteomic analysis by mass spectrometry in preterm infants is feasible. A larger study is required to investigate the potential use of tear proteomics in identification of ROP. Translational Relevance Tear sampling and subsequent mass spectrometry in preterm infants is feasible. Investigation of the premature tear proteome may increase our understanding of retinal development and provide noninvasive biomarkers for identification of treatment-warranted ROP.
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Affiliation(s)
| | | | - Samuel Atkinson
- University of Aberdeen, School of Medicine, Medical Sciences and Nutrition, Foresterhill, Aberdeen, Scotland, UK
| | - Richard Burchmore
- University of Glasgow, Wolfson Wohl Cancer Research Centre, Bearsden, Glasgow, Scotland, UK
| | - Ruth Hamilton
- Royal Hospital for Children, Glasgow, Glasgow, Scotland, UK
| | | | - Suzanne McGill
- University of Glasgow, Wolfson Wohl Cancer Research Centre, Bearsden, Glasgow, Scotland, UK
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Niribili R, Jeyakumar S, Kumaresan A, Lavanya M, Sinha MK, Kausik M, Elango K, Patil S, Allu T, Veerappa VG, Manimaran A, Das DN, Bhuyan M, Ramesha KP. Prolonged follicular dominance is associated with dysregulated proteomic profile of the follicular fluid in Bos indicus cows. Theriogenology 2024; 213:34-42. [PMID: 37793223 DOI: 10.1016/j.theriogenology.2023.09.012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2023] [Revised: 09/14/2023] [Accepted: 09/15/2023] [Indexed: 10/06/2023]
Abstract
Prolonged follicular dominance is one of the conditions associated with disconcerted follicular dynamics that result in substantial economic losses to the farmers through low reproductive efficiency in cattle. Hormonal aberrations associated with prolonged follicular dominance may affect the follicular microenvironment and composition of follicular fluid. The current study focused on proteome changes of follicular fluid in prolonged follicular dominance compared to physiological follicular dominance. Prolonged dominance was induced in Deoni cows (n = 6) by using CIDR (previously used for 7 days) from day 4-8 of estrus, with PGF2 injection on day 6 and day 7 at 12 h intervals. Follicular fluid was collected by ultrasound guided transvaginal follicular aspiration method. Global proteomic analysis of follicular fluid revealed 217 proteins in the Deoni cow, with the majority of proteins involved in 21 pathways, 42 molecular functions, and 106 biological processes. Complement and coagulation cascades (22.8%) and cholesterol metabolism (4.68%) were the major pathways in which identified proteins were involved. Comparison of physiological and prolonged dominant follicular fluid revealed differential expression of 26 proteins, of which 15 were upregulated and 11 were downregulated. Proteins involved in complement and coagulation cascades, and vitamin digestion and absorption were found to be dysregulated in PFD. The present study suggests that the expression of proteins involved in inflammation, oocyte metabolism, and ovulation cascade were found to be dysregulated in the follicular fluid of prolonged follicular dominance consequently resulting in delayed ovulation or anovulation.
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Affiliation(s)
- Rajbangshi Niribili
- Livestock Research Centre, Southern Regional Station of ICAR-National Dairy Research Institute, Adugodi, Bengaluru, 560030, India
| | - Sakthivel Jeyakumar
- Livestock Research Centre, Southern Regional Station of ICAR-National Dairy Research Institute, Adugodi, Bengaluru, 560030, India.
| | - Arumugam Kumaresan
- Theriogenology Laboratory, Southern Regional Station of ICAR-National Dairy Research Institute, Adugodi, Bengaluru, 560030, India
| | - Maharajan Lavanya
- Livestock Research Centre, Southern Regional Station of ICAR-National Dairy Research Institute, Adugodi, Bengaluru, 560030, India
| | - Manish Kumar Sinha
- Theriogenology Laboratory, Southern Regional Station of ICAR-National Dairy Research Institute, Adugodi, Bengaluru, 560030, India
| | - Majumder Kausik
- Livestock Research Centre, Southern Regional Station of ICAR-National Dairy Research Institute, Adugodi, Bengaluru, 560030, India
| | - Kamaraj Elango
- Theriogenology Laboratory, Southern Regional Station of ICAR-National Dairy Research Institute, Adugodi, Bengaluru, 560030, India
| | - Shivanagouda Patil
- Theriogenology Laboratory, Southern Regional Station of ICAR-National Dairy Research Institute, Adugodi, Bengaluru, 560030, India
| | - Teja Allu
- Livestock Research Centre, Southern Regional Station of ICAR-National Dairy Research Institute, Adugodi, Bengaluru, 560030, India
| | - Vedamurthy G Veerappa
- Livestock Research Centre, Southern Regional Station of ICAR-National Dairy Research Institute, Adugodi, Bengaluru, 560030, India
| | - Ayyasamy Manimaran
- Livestock Research Centre, Southern Regional Station of ICAR-National Dairy Research Institute, Adugodi, Bengaluru, 560030, India
| | - D N Das
- Dairy Production Section, Southern Regional Station of ICAR-National Dairy Research Institute, Adugodi, Bengaluru, 560030, India
| | - Manjyoti Bhuyan
- Department of ARGO, College of Veterinary Science, Assam Agricultural University, Khanapara, Guwahati, Assam, 781 022, India
| | - K P Ramesha
- Dairy Production Section, Southern Regional Station of ICAR-National Dairy Research Institute, Adugodi, Bengaluru, 560030, India
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Effects of different ratios of omega-6:omega-3 fatty acids in the diet of sows on the proteome of milk-derived extracellular vesicles. J Proteomics 2022; 264:104632. [DOI: 10.1016/j.jprot.2022.104632] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2022] [Revised: 05/18/2022] [Accepted: 05/19/2022] [Indexed: 11/24/2022]
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