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For: Arad G, Geiger T. Functional impact of protein-RNA variation in clinical cancer analyses. Mol Cell Proteomics 2023:100587. [PMID: 37290530 PMCID: PMC10388586 DOI: 10.1016/j.mcpro.2023.100587] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2022] [Revised: 04/08/2023] [Accepted: 05/25/2023] [Indexed: 06/10/2023]  Open
Number Cited by Other Article(s)
1
Mahyari E, Boggy GJ, McElfresh GW, Kaza M, Benjamin S, Varco-Merth B, Ojha S, Feltham S, Goodwin W, Nkoy C, Duell D, Selseth A, Bennett T, Barber-Axthelm A, Smedley JV, Labriola CS, Axthelm MK, Reeves RK, Okoye AA, Hansen SG, Picker LJ, Bimber BN. Enhanced interpretation of immune cell phenotype and function through a rhesus macaque single-cell atlas. CELL GENOMICS 2025;5:100849. [PMID: 40233746 DOI: 10.1016/j.xgen.2025.100849] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2024] [Revised: 02/17/2025] [Accepted: 03/18/2025] [Indexed: 04/17/2025]
2
Moon SW, Lee JC, Lee JH, Kim TY, Park JH. Clinical and Prognostic Value of VHL in Korean Patients with Rectal Cancer. MEDICINA (KAUNAS, LITHUANIA) 2025;61:306. [PMID: 40005423 PMCID: PMC11857133 DOI: 10.3390/medicina61020306] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/30/2024] [Revised: 01/28/2025] [Accepted: 02/02/2025] [Indexed: 02/27/2025]
3
Liu Y, Elmas A, Huang KL. Mutation impact on mRNA versus protein expression across human cancers. Gigascience 2025;14:giae113. [PMID: 39775839 PMCID: PMC11702362 DOI: 10.1093/gigascience/giae113] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2024] [Revised: 09/13/2024] [Accepted: 12/05/2024] [Indexed: 01/11/2025]  Open
4
Girnius N, Henstridge AZ, Marks B, Yu JK, Gray GK, Sander C, Zervantonakis IK, Luna A. Cilengitide sensitivity is predicted by overall integrin expression in breast cancer. Breast Cancer Res 2024;26:187. [PMID: 39707454 DOI: 10.1186/s13058-024-01942-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2024] [Accepted: 12/03/2024] [Indexed: 12/23/2024]  Open
5
Suehiro T, Ahmad KM, Hoang NTD, Xu B, Komatsu H, Kurachi K, Nikawa H, Mine Y, Matsuki T, Asano K, Fujii M. Activation of platelet-derived growth factor receptors regulate connective tissue growth factor protein levels via the AKT pathway in malignant mesothelioma cells. J Biochem 2024;176:460-471. [PMID: 39441675 DOI: 10.1093/jb/mvae068] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2024] [Revised: 08/28/2024] [Accepted: 09/11/2024] [Indexed: 10/25/2024]  Open
6
Verhey TB, Seo H, Gillmor A, Thoppey-Manoharan V, Schriemer D, Morrissy S. mosaicMPI: a framework for modular data integration across cohorts and -omics modalities. Nucleic Acids Res 2024;52:e53. [PMID: 38813827 PMCID: PMC11229337 DOI: 10.1093/nar/gkae442] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2023] [Revised: 04/26/2024] [Accepted: 05/10/2024] [Indexed: 05/31/2024]  Open
7
Gillette MA, Jimenez CR, Carr SA. Clinical Proteomics: A Promise Becoming Reality. Mol Cell Proteomics 2024;23:100688. [PMID: 38281326 PMCID: PMC10926064 DOI: 10.1016/j.mcpro.2023.100688] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2024]  Open
8
Liu Y, Elmas A, Huang KL. Mutation Impact on mRNA Versus Protein Expression across Human Cancers. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.11.13.566942. [PMID: 38014015 PMCID: PMC10680725 DOI: 10.1101/2023.11.13.566942] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/29/2023]
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