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Suwannarach N, Kumla J, Zhao Y, Kakumyan P. Impact of Cultivation Substrate and Microbial Community on Improving Mushroom Productivity: A Review. BIOLOGY 2022; 11:biology11040569. [PMID: 35453768 PMCID: PMC9027886 DOI: 10.3390/biology11040569] [Citation(s) in RCA: 19] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/09/2022] [Revised: 04/06/2022] [Accepted: 04/06/2022] [Indexed: 02/04/2023]
Abstract
Simple Summary Lignocellulosic material and substrate formulations affect mushroom productivity. The microbial community in cultivation substrates affects the quality of the substrates and the efficiency of mushroom production. The elucidation of the key microbes and their biochemical function can serve as a useful guide in the development of a more effective system for mushroom cultivation. Abstract Lignocellulosic materials commonly serve as base substrates for mushroom production. Cellulose, hemicellulose, and lignin are the major components of lignocellulose materials. The composition of these components depends upon the plant species. Currently, composted and non-composted lignocellulosic materials are used as substrates in mushroom cultivation depending on the mushroom species. Different substrate compositions can directly affect the quality and quantity of mushroom production yields. Consequently, the microbial dynamics and communities of the composting substrates can significantly affect mushroom production. Therefore, changes in both substrate composition and microbial diversity during the cultivation process can impact the production of high-quality substrates and result in a high degree of biological efficiency. A brief review of the current findings on substrate composition and microbial diversity for mushroom cultivation is provided in this paper. We also summarize the advantages and disadvantages of various methods of mushroom cultivation by analyzing the microbial diversity of the composting substrates during mushroom cultivation. The resulting information will serve as a useful guide for future researchers in their attempts to increase mushroom productivity through the selection of suitable substrate compositions and their relation to the microbial community.
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Affiliation(s)
- Nakarin Suwannarach
- Research Center of Microbial Diversity and Sustainable Utilization, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand; (N.S.); (J.K.)
| | - Jaturong Kumla
- Research Center of Microbial Diversity and Sustainable Utilization, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand; (N.S.); (J.K.)
| | - Yan Zhao
- Institute of Edible Fungi, Shanghai Academy of Agricultural Sciences, Shanghai 201403, China
- Correspondence: (Y.Z.); (P.K.)
| | - Pattana Kakumyan
- Institute of Edible Fungi, Shanghai Academy of Agricultural Sciences, Shanghai 201403, China
- School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand
- Correspondence: (Y.Z.); (P.K.)
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Heckman K, Hicks Pries CE, Lawrence CR, Rasmussen C, Crow SE, Hoyt AM, von Fromm SF, Shi Z, Stoner S, McGrath C, Beem-Miller J, Berhe AA, Blankinship JC, Keiluweit M, Marín-Spiotta E, Monroe JG, Plante AF, Schimel J, Sierra CA, Thompson A, Wagai R. Beyond bulk: Density fractions explain heterogeneity in global soil carbon abundance and persistence. GLOBAL CHANGE BIOLOGY 2022; 28:1178-1196. [PMID: 34862692 DOI: 10.1111/gcb.16023] [Citation(s) in RCA: 21] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2021] [Revised: 11/02/2021] [Accepted: 11/02/2021] [Indexed: 06/13/2023]
Abstract
Understanding the controls on the amount and persistence of soil organic carbon (C) is essential for predicting its sensitivity to global change. The response may depend on whether C is unprotected, isolated within aggregates, or protected from decomposition by mineral associations. Here, we present a global synthesis of the relative influence of environmental factors on soil organic C partitioning among pools, abundance in each pool (mg C g-1 soil), and persistence (as approximated by radiocarbon abundance) in relatively unprotected particulate and protected mineral-bound pools. We show that C within particulate and mineral-associated pools consistently differed from one another in degree of persistence and relationship to environmental factors. Soil depth was the best predictor of C abundance and persistence, though it accounted for more variance in persistence. Persistence of all C pools decreased with increasing mean annual temperature (MAT) throughout the soil profile, whereas persistence increased with increasing wetness index (MAP/PET) in subsurface soils (30-176 cm). The relationship of C abundance (mg C g-1 soil) to climate varied among pools and with depth. Mineral-associated C in surface soils (<30 cm) increased more strongly with increasing wetness index than the free particulate C, but both pools showed attenuated responses to the wetness index at depth. Overall, these relationships suggest a strong influence of climate on soil C properties, and a potential loss of soil C from protected pools in areas with decreasing wetness. Relative persistence and abundance of C pools varied significantly among land cover types and soil parent material lithologies. This variability in each pool's relationship to environmental factors suggests that not all soil organic C is equally vulnerable to global change. Therefore, projections of future soil organic C based on patterns and responses of bulk soil organic C may be misleading.
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Affiliation(s)
- Katherine Heckman
- USDA Forest Service, Northern Research Station, Houghton, Michigan, USA
| | | | - Corey R Lawrence
- U.S. Geological Survey, Geosciences and Environmental Change Science Center, Denver, Colorado, USA
| | - Craig Rasmussen
- Department of Environmental Science, University of Arizona, Tucson, Arizona, USA
| | - Susan E Crow
- Natural Resources and Environmental Management Department, University of Hawaii Manoa, Honolulu, Hawaii, USA
| | - Alison M Hoyt
- Department of Biogeochemical Processes, Max-Planck-Institute for Biogeochemistry, Jena, Germany
- Climate and Ecosystem Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA
| | - Sophie F von Fromm
- Department of Biogeochemical Processes, Max-Planck-Institute for Biogeochemistry, Jena, Germany
- Department of Environmental Systems Science, ETH Zurich, Zurich, Switzerland
| | - Zheng Shi
- Computational Sciences & Engineering Division and Climate Change Science Institute, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA
| | - Shane Stoner
- Department of Biogeochemical Processes, Max-Planck-Institute for Biogeochemistry, Jena, Germany
- Department of Environmental Systems Science, ETH Zurich, Zurich, Switzerland
| | - Casey McGrath
- Natural Resources and Environmental Management Department, University of Hawaii Manoa, Honolulu, Hawaii, USA
| | - Jeffrey Beem-Miller
- Department of Biogeochemical Processes, Max-Planck-Institute for Biogeochemistry, Jena, Germany
| | - Asmeret Asefaw Berhe
- Department of Life and Environmental Sciences, University of California, Merced, California, USA
| | - Joseph C Blankinship
- Department of Environmental Science, University of Arizona, Tucson, Arizona, USA
| | - Marco Keiluweit
- School of Earth & Sustainability and Stockbridge School of Agriculture, University of Massachusetts, Amherst, Massachusetts, USA
| | - Erika Marín-Spiotta
- Department of Geography, University of Wisconsin-Madison, Madison, Wisconsin, USA
| | - J Grey Monroe
- Department of Plant Sciences, University of California, Davis, Davis, California, USA
| | - Alain F Plante
- Department of Earth & Environmental Science, University of Pennsylvania, Philadelphia, PA, USA
| | - Joshua Schimel
- Department of Ecology Evolution and Marine Biology, University of California Santa Barbara, Santa Barbara, California, USA
| | - Carlos A Sierra
- Department of Biogeochemical Processes, Max-Planck-Institute for Biogeochemistry, Jena, Germany
- Department of Ecology, Swedish University of Agricultural Sciences, Uppsala, Sweden
| | - Aaron Thompson
- Department of Crop and Soil Sciences and the Odum School of Ecology, University of Georgia, Athens, Georgia, USA
| | - Rota Wagai
- Institute for Agro-Environmental Sciences, National Agriculture and Food Research Organization, Tsukuba, Ibaraki, Japan
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