"Sporotan" a new fluorescent stain for identifying cryptic spores of Rhodobacter johrii

Assessing CaDPA levels, metabolic activity, and spore detection through deuterium labeling

Many strains among spore-forming bacteria species are associated with food spoilage, foodborne disease, and hospital-acquired infections. Understanding the impact of environmental conditions and decontamination techniques on the metabolic activity, viability, and biomarkers of these spores is crucial for combatting them. To distinguish and track spores and to understand metabolic mechanisms, spores must be labeled. Staining or genetic modification are current methods for this, however, these methods can be time-consuming, and affect the viability and function of spore samples. In this work, we investigate the use of heavy water for permanent isotope labeling of spores and Raman spectroscopy for tracking sporulation/germination mechanisms. We also discuss the potential of this method in observing decontamination. We find that steady-state deuterium levels in the spore are achieved after only ∼48 h of incubation with 30% D2O-infused broth and sporulation, generating Raman peaks at cell silent region of 2200 and 2300 cm-1. These deuterium levels then decrease rapidly upon spore germination in non-deuterated media. We further find that unlike live spores, spores inactivated using various methods do not lose these Raman peaks upon incubation in growth media, suggesting these peaks may be used to indicate the viability of a spore sample. We further observe several Raman peaks exclusive to deuterated DPA, a spore-specific chemical biomarker, at e.g. 988 and 2300 cm-1, which can be used to track underlying changes in spores involving DPA. In conclusion, permanent spore labeling using deuterium offers a robust and non-invasive way of labeling bacterial spores for marking, viability determination, and characterising spore activity.

Combination of biodegradation and fenton process for efficient removal of PDM/ZnO

In the present study, an investigation was conducted on the removal of polydiallyldimethylammonium chloride-acrylic-acrylamide-hydroxyethyl acrylate/ZnO nanocomposites (PDM/ZnO) through biodegradation and Fenton process coupled treatments. As revealed from the results of the chemical oxygen demand, the total organic carbon, the biochemical oxygen demand and the CO₂ production analysis, PDM/ZnO could be partially biodegraded. The optimal initial pH, the mixed liquid suspended solids concentration and additional carbon source (glucose) dosage in the biodegradation were 7.0, 4.0 g/L and 1.0 g/L, respectively. On the whole, NaCl, the coexisted metal cations (Cu²⁺, Zn²⁺ and Cr³⁺) and additional NH₄Cl inhibited the biodegradation of PDM/ZnO. PDM/ZnO was suggested to adversely affect on microbial community structure and activity. Optimum conditions for Fenton treatment were 50 mg/L Fe²⁺, 20 mL/L H₂O₂ and pH 2.0. Biodegradation showed that 64% of PDM/ZnO was removed. Besides, the combination of Fenton post-treatment could achieve an over 97% removal of PDM/ZnO. Thus, Fenton process combined biodegradation pre-treatment can act as an effective method to remove PDM/ZnO.

Aquisphaera insulae sp. nov., a new member in the family Isosphaeraceae, isolated from the floating island of Loktak lake and emended description of the genus Aquisphaera

Strain JC669^T was isolated from a floating island of Loktak lake, Manipur, India and shares the highest 16S rRNA gene sequence identity with Aquisphaera giovannonii OJF2^T. The novel strain is aerobic, Gram negative, light pink-coloured, non-motile, NaCl intolerant and spherical to oval-shaped. It grows in the form of single cells or aggregates and possibly forms structures which appear like fruiting bodies. Strain JC669^T grows well up to pH 9.0.The isolate produces MK-6 as respiratory quinone, C_18:1ω9c, C_16:0 and C_18:0 as major fatty acids and phosphatidylcholine, an unidentified amino lipid, an unidentified choline lipid (UCL) and six additional unidentified lipids (UL1, 2, 3, 4, 5, 6) as polar lipids. Strain JC669^T has a large genome size of 10.04 Mb and the genomic G + C content was 68.5 mol%. The genome contained all genes essential for lycopene related carotenoid biosynthesis. The polyphasic analysis of its phylogenetic position, morphological, physiological and genomic features supports the classification of strain JC669^T as a novel species of the genus Aquisphaera, for which we propose the name Aquisphaera insulae sp. nov. Strain JC669^T (= KCTC 72672^T = NBRC 114306^T) is the type strain of the novel species.