1
|
Blandón LM, Marín MA, Quintero M, Jutinico-Shubach LM, Montoya-Giraldo M, Santos-Acevedo M, Gómez-León J. Diversity of cultivable bacteria from deep-sea sediments of the Colombian Caribbean and their potential in bioremediation. Antonie van Leeuwenhoek 2022; 115:421-431. [PMID: 35066712 DOI: 10.1007/s10482-021-01706-4] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2021] [Accepted: 12/28/2021] [Indexed: 11/26/2022]
Abstract
The diversity of deep-sea cultivable bacteria was studied in seven sediment samples of the Colombian Caribbean. Three hundred and fifty two marine bacteria were isolated according to its distinct morphological character on the solid media, then DNA sequences of the 16S rRNA were amplified to identify the isolated strains. The identified bacterial were arranged in three phylogenetic groups, Firmicutes, Proteobacteria, and Actinobacteria, with 34 different OTUs defined at ≥ 97% of similarity and 70 OTUs at ≥ 98.65%, being the 51% Firmicutes, 34% Proteobacteria and 15% Actinobacteria. Bacillus and Fictibacillus were the dominant genera in Firmicutes, Halomonas and Pseudomonas in Proteobacteria and Streptomyces and Micromonospora in Actinobacteria. In addition, the strains were tested for biosurfactants and lipolytic enzymes production, with 120 biosurfactant producing strains (mainly Firmicutes) and, 56 lipolytic enzymes producing strains (Proteobacteria). This report contributes to the understanding of the diversity of the marine deep-sea cultivable bacteria from the Colombian Caribbean, and their potential application as bioremediation agents.
Collapse
Affiliation(s)
- Lina Marcela Blandón
- Marine Bioprospecting Line, Marine and Coastal Research Institute "José Benito Vives de Andréis"- INVEMAR, Calle 25 No. 2-55, Playa Salguero, Santa Marta D.T.C.H., Colombia
| | - Mario Alejandro Marín
- Departamento de Biologia Animal, Instituto de Biologia, Universidade Estadual de Campinas - UNICAMP, Campinas, SP, 13083-970, Brazil
| | - Marynes Quintero
- Marine Bioprospecting Line, Marine and Coastal Research Institute "José Benito Vives de Andréis"- INVEMAR, Calle 25 No. 2-55, Playa Salguero, Santa Marta D.T.C.H., Colombia
| | - Laura Marcela Jutinico-Shubach
- Marine Bioprospecting Line, Marine and Coastal Research Institute "José Benito Vives de Andréis"- INVEMAR, Calle 25 No. 2-55, Playa Salguero, Santa Marta D.T.C.H., Colombia
| | - Manuela Montoya-Giraldo
- Marine Bioprospecting Line, Marine and Coastal Research Institute "José Benito Vives de Andréis"- INVEMAR, Calle 25 No. 2-55, Playa Salguero, Santa Marta D.T.C.H., Colombia
| | - Marisol Santos-Acevedo
- Marine Bioprospecting Line, Marine and Coastal Research Institute "José Benito Vives de Andréis"- INVEMAR, Calle 25 No. 2-55, Playa Salguero, Santa Marta D.T.C.H., Colombia
| | - Javier Gómez-León
- Marine Bioprospecting Line, Marine and Coastal Research Institute "José Benito Vives de Andréis"- INVEMAR, Calle 25 No. 2-55, Playa Salguero, Santa Marta D.T.C.H., Colombia.
| |
Collapse
|
2
|
Ortellado LE, Lisowiec LA, Quiroga-Zingaretti AE, Villalba LL, Zapata PD, Fonseca MI. Exploring novel Penicillium lipolytic activity from the Paranaense rainforest. ENVIRONMENTAL TECHNOLOGY 2021; 42:4372-4379. [PMID: 32319349 DOI: 10.1080/09593330.2020.1759697] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/04/2019] [Accepted: 04/15/2020] [Indexed: 06/11/2023]
Abstract
In this study, we evaluated the presence of lipases in twenty fungal strains of the genus Penicillium using an efficient and low-cost method with a view to an application in the treatment of cooking oil residues. The Paranaense rainforest is one of the most biodiverse places on the planet, making it the most likely site to find new fungal strains with lipolytic potential. The objective of this study was to determine the lipolytic potential and the isoenzyme profile of fungi belonging to the Penicillium genus isolated from the Paranaense rainforest. Seven fungal strains were selected using qualitative screening. Quantitative analysis revealed that the isolate Penicillium sp. LBM 088 was the best producer of lipase, reaching 1224 U mL-1 of lipolytic activity. Zymogram gels of the seven selected strains showed different enzymatic profiles: In general, the molecular mass of proteins varied from 26 to 42 kDa. Also, proteins from fungi grown on olive oil showed a higher variation in their molecular mass than proteins from fungi grown without the oil. The search for new lipase-secreting organisms should lead to the exploitation of biodiversity in the region.
Collapse
Affiliation(s)
- Laura E Ortellado
- Laboratorio de Biotecnología Molecular, Instituto de Biotecnología Misiones, Facultad de Ciencias Exactas Químicas y Naturales, Universidad Nacional de Misiones. Posadas, Argentina
| | - Leandro A Lisowiec
- Laboratorio de Biotecnología Molecular, Instituto de Biotecnología Misiones, Facultad de Ciencias Exactas Químicas y Naturales, Universidad Nacional de Misiones. Posadas, Argentina
| | - Adriana E Quiroga-Zingaretti
- Laboratorio de Biotecnología Molecular, Instituto de Biotecnología Misiones, Facultad de Ciencias Exactas Químicas y Naturales, Universidad Nacional de Misiones. Posadas, Argentina
| | - Laura L Villalba
- Laboratorio de Biotecnología Molecular, Instituto de Biotecnología Misiones, Facultad de Ciencias Exactas Químicas y Naturales, Universidad Nacional de Misiones. Posadas, Argentina
| | - Pedro D Zapata
- Laboratorio de Biotecnología Molecular, Instituto de Biotecnología Misiones, Facultad de Ciencias Exactas Químicas y Naturales, Universidad Nacional de Misiones. Posadas, Argentina
| | - María I Fonseca
- Laboratorio de Biotecnología Molecular, Instituto de Biotecnología Misiones, Facultad de Ciencias Exactas Químicas y Naturales, Universidad Nacional de Misiones. Posadas, Argentina
| |
Collapse
|
3
|
Enzymatic Bioremediation: Current Status, Challenges of Obtaining Process, and Applications. MICROORGANISMS FOR SUSTAINABILITY 2019. [DOI: 10.1007/978-981-13-7462-3_4] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
|
4
|
Sarmah N, Revathi D, Sheelu G, Yamuna Rani K, Sridhar S, Mehtab V, Sumana C. Recent advances on sources and industrial applications of lipases. Biotechnol Prog 2017; 34:5-28. [DOI: 10.1002/btpr.2581] [Citation(s) in RCA: 172] [Impact Index Per Article: 21.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2017] [Revised: 10/18/2017] [Indexed: 12/13/2022]
Affiliation(s)
- Nipon Sarmah
- Chemical Engineering Div.; CSIR-Indian Institute of Chemical Technology; Hyderabad 500007 India
- Academy of Scientific and Innovative Research (AcSIR); Chennai 600 113 India
| | - D. Revathi
- Chemical Engineering Div.; CSIR-Indian Institute of Chemical Technology; Hyderabad 500007 India
| | - G. Sheelu
- Medicinal Chemistry and Pharmacology Div.; CSIR-Indian Institute of Chemical Technology; Hyderabad 500007 India
| | - K. Yamuna Rani
- Chemical Engineering Div.; CSIR-Indian Institute of Chemical Technology; Hyderabad 500007 India
| | - S. Sridhar
- Chemical Engineering Div.; CSIR-Indian Institute of Chemical Technology; Hyderabad 500007 India
| | - V. Mehtab
- Chemical Engineering Div.; CSIR-Indian Institute of Chemical Technology; Hyderabad 500007 India
| | - C. Sumana
- Chemical Engineering Div.; CSIR-Indian Institute of Chemical Technology; Hyderabad 500007 India
- Academy of Scientific and Innovative Research (AcSIR); Chennai 600 113 India
| |
Collapse
|
5
|
Okino-Delgado CH, do Prado DZ, Facanali R, Marques MMO, Nascimento AS, Fernandes CJDC, Zambuzzi WF, Fleuri LF. Bioremediation of cooking oil waste using lipases from wastes. PLoS One 2017; 12:e0186246. [PMID: 29073166 PMCID: PMC5657992 DOI: 10.1371/journal.pone.0186246] [Citation(s) in RCA: 41] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2017] [Accepted: 09/27/2017] [Indexed: 02/08/2023] Open
Abstract
Cooking oil waste leads to well-known environmental impacts and its bioremediation by lipase-based enzymatic activity can minimize the high cytotoxic potential. In addition, they are among the biocatalysts most commercialized worldwide due to the versatility of reactions and substrates. However, although lipases are able to process cooking oil wastes, the products generated from this process do not necessarily become less toxic. Thus, the aim of the current study is to analyze the bioremediation of lipase-catalyzed cooking oil wastes, as well as their effect on the cytotoxicity of both the oil and its waste before and after enzymatic treatment. Thus, assessed the post-frying modification in soybean oil and in its waste, which was caused by hydrolysis reaction catalyzed by commercial and home-made lipases. The presence of lipases in the extracts obtained from orange wastes was identified by zymography. The profile of the fatty acid esters formed after these reactions was detected and quantified through gas chromatography and fatty acids profile compared through multivariate statistical analyses. Finally, the soybean oil and its waste, with and without enzymatic treatment, were assessed for toxicity in cytotoxicity assays conducted in vitro using fibroblast cell culture. The soybean oil wastes treated with core and frit lipases through transesterification reaction were less toxic than the untreated oils, thus confirming that cooking oil wastes can be bioremediated using orange lipases.
Collapse
Affiliation(s)
- Clarissa Hamaio Okino-Delgado
- Chemistry and Biochemistry Department, Institute of Biosciences, São Paulo State University (UNESP), Botucatu, SP, Brazil
- * E-mail:
| | - Débora Zanoni do Prado
- Chemistry and Biochemistry Department, Institute of Biosciences, São Paulo State University (UNESP), Botucatu, SP, Brazil
| | | | | | - Augusto Santana Nascimento
- Chemistry and Biochemistry Department, Institute of Biosciences, São Paulo State University (UNESP), Botucatu, SP, Brazil
| | | | - William Fernando Zambuzzi
- Chemistry and Biochemistry Department, Institute of Biosciences, São Paulo State University (UNESP), Botucatu, SP, Brazil
| | - Luciana Francisco Fleuri
- Chemistry and Biochemistry Department, Institute of Biosciences, São Paulo State University (UNESP), Botucatu, SP, Brazil
| |
Collapse
|
6
|
Borowiecki P, Paprocki D, Dudzik A, Plenkiewicz J. Chemoenzymatic Synthesis of Proxyphylline Enantiomers. J Org Chem 2016; 81:380-95. [DOI: 10.1021/acs.joc.5b01840] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Affiliation(s)
- Paweł Borowiecki
- Warsaw University of Technology, Faculty of Chemistry,
Institute of Biotechnology, Koszykowa St. 3, 00-664 Warsaw, Poland
| | - Daniel Paprocki
- Warsaw University of Technology, Faculty of Chemistry,
Institute of Biotechnology, Koszykowa St. 3, 00-664 Warsaw, Poland
| | - Agnieszka Dudzik
- Jerzy
Haber Institute of Catalysis and Surface Chemistry, Polish Academy of Sciences, Niezapominajek St. 8, 30-239 Cracow, Poland
| | - Jan Plenkiewicz
- Warsaw University of Technology, Faculty of Chemistry,
Institute of Biotechnology, Koszykowa St. 3, 00-664 Warsaw, Poland
| |
Collapse
|
7
|
Mita L, Grumiro L, Rossi S, Bianco C, Defez R, Gallo P, Mita DG, Diano N. Bisphenol A removal by a Pseudomonas aeruginosa immobilized on granular activated carbon and operating in a fluidized bed reactor. JOURNAL OF HAZARDOUS MATERIALS 2015; 291:129-135. [PMID: 25781217 DOI: 10.1016/j.jhazmat.2015.02.072] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2014] [Revised: 02/25/2015] [Accepted: 02/26/2015] [Indexed: 06/04/2023]
Abstract
Serratia rubidiae, Pseudomonas aeruginosa and Escherichia coli K12 have been studied for their ability of Bisphenol A removal from aqueous systems and biofilm formation on activated granule carbon. Mathematical equations for biodegradation process have been elaborated and discussed. P. aeruginosa was found the best strain to be employed in the process of Bisphenol A removal. The yield in BPA removal of a P. aeruginosa biofilm grown on GAC and operating in a fluidized bed reactor has been evaluated. The results confirm the usefulness in using biological activated carbon (BAC process) to remove phenol compounds from aqueous systems.
Collapse
Affiliation(s)
- Luigi Mita
- National Laboratory on Endocrine Disruptors, National Institute of Biostructures and Biosystems (INBB), Via P. Castellino, 111, 80131 Naples, Italy; Institute of Genetic and Biophysics "ABT", Via P. Castellino, 111, 80131 Naples Italy
| | - Laura Grumiro
- National Laboratory on Endocrine Disruptors, National Institute of Biostructures and Biosystems (INBB), Via P. Castellino, 111, 80131 Naples, Italy
| | - Sergio Rossi
- Institute of Genetic and Biophysics "ABT", Via P. Castellino, 111, 80131 Naples Italy
| | - Carmen Bianco
- Institute of Biosciences and BioResources, Via P. Castellino, 111, 80131 Naples, Italy
| | - Roberto Defez
- Institute of Biosciences and BioResources, Via P. Castellino, 111, 80131 Naples, Italy
| | - Pasquale Gallo
- Dipartimento di Chimica, Istituto Zooprofilattico Sperimentale del Mezzogiorno, Via della Salute 2, 80055 Portici, Naples, Italy
| | - Damiano Gustavo Mita
- National Laboratory on Endocrine Disruptors, National Institute of Biostructures and Biosystems (INBB), Via P. Castellino, 111, 80131 Naples, Italy; Institute of Genetic and Biophysics "ABT", Via P. Castellino, 111, 80131 Naples Italy.
| | - Nadia Diano
- National Laboratory on Endocrine Disruptors, National Institute of Biostructures and Biosystems (INBB), Via P. Castellino, 111, 80131 Naples, Italy; Department of Experimental Medicine, Second University of Naples, Via S.M. di Costantinopoli, 16, 80138 Naples Italy
| |
Collapse
|
8
|
Surhio MA, Talpur FN, Nizamani SM, Amin F, Bong CW, Lee CW, Ashraf MA, Shah MR. Complete degradation of dimethyl phthalate by biochemical cooperation of the Bacillus thuringiensis strain isolated from cotton field soil. RSC Adv 2014. [DOI: 10.1039/c4ra09465d] [Citation(s) in RCA: 47] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
We have reported a highly efficient dimethyl phthalate (DMP) degrading bacteria,Bacillus thuringiensis, which mineralize 99% of 400 mg L−1DMP. Various experimental variables and intermediates were investigated with proposed biodegradation pathway.
Collapse
Affiliation(s)
- Muhammad Ali Surhio
- National Centre of Excellence in Analytical Chemistry
- University of Sindh
- Jamshoro-76080, Pakistan
| | - Farah N. Talpur
- National Centre of Excellence in Analytical Chemistry
- University of Sindh
- Jamshoro-76080, Pakistan
| | - Shafi M. Nizamani
- National Centre of Excellence in Analytical Chemistry
- University of Sindh
- Jamshoro-76080, Pakistan
| | - Farah Amin
- National Centre of Excellence in Analytical Chemistry
- University of Sindh
- Jamshoro-76080, Pakistan
| | - Chui Wei Bong
- Institute of Biological Sciences
- Faculty of Science Building
- University of Malaya
- Kuala Lumpur, Malaysia
| | - Choon Weng Lee
- Institute of Biological Sciences
- Faculty of Science Building
- University of Malaya
- Kuala Lumpur, Malaysia
| | - M. A. Ashraf
- Department of Geology
- Faculty of Science
- University of Malaya
- Kuala Lumpur, Malaysia
| | - Muhammad Raza Shah
- H.E.J. Research Institute of Chemistry
- International Center for Chemical and Biological Sciences
- University of Karachi
- Karachi 75270, Pakistan
| |
Collapse
|
9
|
Catapane M, Nicolucci C, Menale C, Mita L, Rossi S, Mita DG, Diano N. Enzymatic removal of estrogenic activity of nonylphenol and octylphenol aqueous solutions by immobilized laccase from Trametes versicolor. JOURNAL OF HAZARDOUS MATERIALS 2013; 248-249:337-46. [PMID: 23416477 DOI: 10.1016/j.jhazmat.2013.01.031] [Citation(s) in RCA: 54] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/21/2012] [Revised: 01/07/2013] [Accepted: 01/16/2013] [Indexed: 05/15/2023]
Abstract
A fluidized bed reactor, filled with laccase-based beads, has been employed to bioremediate aqueous solutions polluted by endocrine disruptors belonging to the alkylphenols (APs) class. In particular Octylphenol and Nonylphenol have been studied. The catalytic activity of free and immobilized laccase from Trametes versicolor has been characterized as a function of pH, temperature and substrate concentration in the reaction medium. In view of practical applications for each substrate concentration the removal efficiency (RE), the time to halve the initial concentration (τ50), and the tc=0, i.e. the time to reach complete pollutant removal, have been calculated. The immobilized laccase exhibited a lower affinity for octylphenol (Km=1.11mM) than for Nonylphenol (Km=0.72mM), but all the other parameters of applicative interest resulted more significant for octylphenol. For example, the times to reach the complete removal of octylphenol compared to those for nonylphenol at the same concentration is shorter of about 15% (at low concentrations) up to 40% (at high concentrations). The study of cell proliferation with MPP89 cells, a human mesothelioma cell line, and the assay with the YES test indicated the loss of estrogenic activity of the APs solutions after laccase treatment.
Collapse
Affiliation(s)
- Maria Catapane
- Institute of Genetics and Biophysics ABT, Via P. Castellino, 111, 80131 Naples, Italy
| | | | | | | | | | | | | |
Collapse
|
10
|
Demarche P, Junghanns C, Nair RR, Agathos SN. Harnessing the power of enzymes for environmental stewardship. Biotechnol Adv 2012; 30:933-53. [DOI: 10.1016/j.biotechadv.2011.05.013] [Citation(s) in RCA: 132] [Impact Index Per Article: 10.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2011] [Accepted: 05/13/2011] [Indexed: 11/17/2022]
|
11
|
Barbosa EF, Silva LP. Qualitative and quantitative topographical surface investigation and solvent effects on internal surface of polypropylene tubes. SURF INTERFACE ANAL 2011. [DOI: 10.1002/sia.3812] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
|
12
|
Biodegradation of bisphenols with immobilized laccase or tyrosinase on polyacrylonitrile beads. Biodegradation 2010; 22:673-83. [DOI: 10.1007/s10532-010-9440-2] [Citation(s) in RCA: 99] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2010] [Accepted: 11/20/2010] [Indexed: 10/18/2022]
|
13
|
Georgieva S, Godjevargova T, Mita D, Diano N, Menale C, Nicolucci C, Carratelli CR, Mita L, Golovinsky E. Non-isothermal bioremediation of waters polluted by phenol and some of its derivatives by laccase covalently immobilized on polypropylene membranes. ACTA ACUST UNITED AC 2010. [DOI: 10.1016/j.molcatb.2010.05.011] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
|
14
|
Ali Khan A, Alzohairy MA. Recent Advances and Applications of Immobilized Enzyme Technologies: A Review. ACTA ACUST UNITED AC 2010. [DOI: 10.3923/rjbsci.2010.565.575] [Citation(s) in RCA: 85] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
|
15
|
Current awareness on yeast. Yeast 2010. [DOI: 10.1002/yea.1718] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022] Open
|