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For: Voloshin ON, Camerini-Otero RD. Synaptic complex revisited; a homologous recombinase flips and switches bases. Mol Cell 2004;15:846-7. [PMID: 15383274 DOI: 10.1016/j.molcel.2004.09.010] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Number Cited by Other Article(s)
1
Sun Z, Wang X, Zhang JZH, He Q. Sulfur-substitution-induced base flipping in the DNA duplex. Phys Chem Chem Phys 2019;21:14923-14940. [PMID: 31233058 DOI: 10.1039/c9cp01989h] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
2
Lee AJ, Sharma R, Hobbs JK, Wälti C. Cooperative RecA clustering: the key to efficient homology searching. Nucleic Acids Res 2017;45:11743-11751. [PMID: 28977583 PMCID: PMC5714135 DOI: 10.1093/nar/gkx769] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2017] [Accepted: 08/25/2017] [Indexed: 01/17/2023]  Open
3
Protonation-dependent base flipping in the catalytic triad of a small RNA. Chem Phys Lett 2017. [DOI: 10.1016/j.cplett.2017.07.003] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
4
León SC, Prentiss M, Fyta M. Binding energies of nucleobase complexes: Relevance to homology recognition of DNA. Phys Rev E 2016;93:062410. [PMID: 27415301 DOI: 10.1103/physreve.93.062410] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2016] [Indexed: 06/06/2023]
5
Yadav T, Carrasco B, Serrano E, Alonso JC. Roles of Bacillus subtilis DprA and SsbA in RecA-mediated genetic recombination. J Biol Chem 2014;289:27640-52. [PMID: 25138221 DOI: 10.1074/jbc.m114.577924] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]  Open
6
Renkawitz J, Lademann CA, Jentsch S. Mechanisms and principles of homology search during recombination. Nat Rev Mol Cell Biol 2014;15:369-83. [PMID: 24824069 DOI: 10.1038/nrm3805] [Citation(s) in RCA: 119] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
7
Mechanism of homology recognition in DNA recombination from dual-molecule experiments. Mol Cell 2012;46:616-24. [PMID: 22560720 DOI: 10.1016/j.molcel.2012.03.029] [Citation(s) in RCA: 72] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2011] [Revised: 02/21/2012] [Accepted: 03/30/2012] [Indexed: 11/24/2022]
8
Ragunathan K, Joo C, Ha T. Real-time observation of strand exchange reaction with high spatiotemporal resolution. Structure 2011;19:1064-73. [PMID: 21827943 DOI: 10.1016/j.str.2011.06.009] [Citation(s) in RCA: 54] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2011] [Revised: 05/23/2011] [Accepted: 06/07/2011] [Indexed: 11/25/2022]
9
Nevinsky GA. Structural, thermodynamic, and kinetic basis for the activities of some nucleic acid repair enzymes. J Mol Recognit 2011;24:656-77. [PMID: 21584877 DOI: 10.1002/jmr.1096] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
10
RecA-Mediated Homology Search as a Nearly Optimal Signal Detection System. Mol Cell 2010;40:388-96. [DOI: 10.1016/j.molcel.2010.10.020] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2009] [Revised: 02/18/2010] [Accepted: 09/08/2010] [Indexed: 11/18/2022]
11
Volodin AA, Bocharova TN, Smirnova EA, Camerini-Otero RD. Reversibility, equilibration, and fidelity of strand exchange reaction between short oligonucleotides promoted by RecA protein from escherichia coli and human Rad51 and Dmc1 proteins. J Biol Chem 2009;284:1495-504. [PMID: 19004837 PMCID: PMC2615514 DOI: 10.1074/jbc.m800612200] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2008] [Revised: 10/21/2008] [Indexed: 11/06/2022]  Open
12
Maintaining replication fork integrity in UV-irradiated Escherichia coli cells. DNA Repair (Amst) 2008;7:1589-602. [PMID: 18644471 DOI: 10.1016/j.dnarep.2008.06.012] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2007] [Revised: 05/14/2008] [Accepted: 06/10/2008] [Indexed: 11/21/2022]
13
Lanzov VA. RecA homologous DNA transferase: Functional activities and a search for homology by recombining DNA molecules. Mol Biol 2007. [DOI: 10.1134/s0026893307030077] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
14
Rudolph CJ, Upton AL, Lloyd RG. Replication fork stalling and cell cycle arrest in UV-irradiated Escherichia coli. Genes Dev 2007;21:668-81. [PMID: 17369400 PMCID: PMC1820941 DOI: 10.1101/gad.417607] [Citation(s) in RCA: 61] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
15
Zhang Z, Fan HY, Goldman JA, Kingston RE. Homology-driven chromatin remodeling by human RAD54. Nat Struct Mol Biol 2007;14:397-405. [PMID: 17417655 DOI: 10.1038/nsmb1223] [Citation(s) in RCA: 65] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2006] [Accepted: 02/27/2007] [Indexed: 01/18/2023]
16
Xiao J, Lee AM, Singleton SF. Direct evaluation of a kinetic model for RecA-mediated DNA-strand exchange: the importance of nucleic acid dynamics and entropy during homologous genetic recombination. Chembiochem 2006;7:1265-78. [PMID: 16847846 DOI: 10.1002/cbic.200600038] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
17
Lee AM, Xiao J, Singleton SF. Origins of sequence selectivity in homologous genetic recombination: insights from rapid kinetic probing of RecA-mediated DNA strand exchange. J Mol Biol 2006;360:343-59. [PMID: 16756994 DOI: 10.1016/j.jmb.2006.04.065] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2006] [Revised: 04/24/2006] [Accepted: 04/26/2006] [Indexed: 10/24/2022]
18
Xiao J, Lee AM, Singleton SF. Construction and evaluation of a kinetic scheme for RecA-mediated DNA strand exchange. Biopolymers 2006;81:473-96. [PMID: 16421856 DOI: 10.1002/bip.20446] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
19
Bugreeva IP, Bugreev DV, Nevinsky GA. Formation of nucleoprotein RecA filament on single-stranded DNA. Analysis by stepwise increase in ligand complexity. FEBS J 2005;272:2734-45. [PMID: 15943808 DOI: 10.1111/j.1742-4658.2005.04693.x] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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