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Mesto E, Okio CKYA, Lemus MA, Schingaro E. {[( E)-(1,3-Benzodioxol-5-yl)methyl-idene]amino}thio-urea. Acta Crystallogr E Crystallogr Commun 2024; 80:125-127. [PMID: 38333137 PMCID: PMC10848994 DOI: 10.1107/s2056989024000033] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/25/2023] [Accepted: 01/02/2024] [Indexed: 02/10/2024]
Abstract
The synthesis and crystallographic analysis of the title compound, C9H9N3O2S, are reported. The compound crystallizes in the monoclinic space group P21/c, revealing characteristic bond lengths and angles typical of thio-semicarbazone groups. The supra-molecular organization primarily arises from hydrogen bonding and π-π stacking inter-actions, leading to distinctive dimeric formations.
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Affiliation(s)
- Ernesto Mesto
- Dipartimento di Scienze della Terra e Geoambientali., Università degli Studi di Bari Aldo Moro, Via E. Orabona 4, 701125 Bari, Italy
| | - Coco K. Y. A. Okio
- Departamento de Quimica, Facultad de Ciencias, Universidad Nacional de Colombia, Carerra 30 No 45-03, Bogotá, Colombia
| | - Maria Alejandra Lemus
- Departamento de Quimica, Facultad de Ciencias, Universidad Nacional de Colombia, Carerra 30 No 45-03, Bogotá, Colombia
| | - Emanuela Schingaro
- Dipartimento di Scienze della Terra e Geoambientali., Università degli Studi di Bari Aldo Moro, Via E. Orabona 4, 701125 Bari, Italy
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Spectral, Molecular Modeling, and Biological Activity Studies on New Schiff's Base of Acenaphthaquinone Transition Metal Complexes. Bioinorg Chem Appl 2021; 2021:6674394. [PMID: 33815493 PMCID: PMC8012121 DOI: 10.1155/2021/6674394] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2020] [Revised: 01/07/2021] [Accepted: 03/06/2021] [Indexed: 11/17/2022] Open
Abstract
The newly synthesized Schiff's base derivative, N-allyl-2-(2-oxoacenaphthylen-1(2H)-ylidene)hydrazine-1-carbothioamide, has been characterized by different spectral techniques. Its reaction with Co(II), Ni(II), and Zn(II) acetate led to the formation of 1 : 1 (M:L) complexes. The IR and NMR spectral data revealed keto-thione form for the free ligand. On chelation with Co(II) and Ni(II), it behaved as mononegative and neutral tridentate via O, N1, and S donors, respectively, while it showed neutral bidentate mode via O and N1 atoms with Zn(II). The electronic spectra indicated that all the isolated complexes have an octahedral structure. The thermal gravimetric analyses confirmed the suggested formula and the presence of coordinated water molecules. The XRD pattern of the metal complexes showed that both Co(II) and Ni(II) have amorphous nature, while Zn(II) complex has monoclinic crystallinity with an average size of 9.10 nm. DFT modeling of the ligand and complexes supported the proposed structures. The calculated HOMO-LUMO energy gap, ΔEH-L, of the ligand complexes was 1.96–2.49 eV range where HAAT < Zn(II) < Ni(II) < Co(II). The antioxidant activity investigation showed that the ligand and Zn(II) complex have high activity than other complexes, 88.5 and 88.6%, respectively. Accordingly, the antitumor activity of isolated compounds was examined against the hepatocellular carcinoma cell line (HepG2), where both HAAT and Zn(II) complex exhibited very strong activity, IC50 6.45 ± 0.25 and 6.39 ± 0.18 μM, respectively.
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Spectral, modeling and anticancer activity studies on the newly synthesized N-allyl-2-(2,4-dinitrophenyl)hydrazine-1-carbothioamide and some bivalent metal complexes. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2020.128949] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Süleymanoğlu M, Erdem-Kuruca S, Bal-Demirci T, Özdemir N, Ülküseven B, Yaylım İ. Synthesis, structural, cytotoxic and pharmacokinetic evaluation of some thiosemicarbazone derivatives. J Biochem Mol Toxicol 2020; 34:e22512. [PMID: 32314849 DOI: 10.1002/jbt.22512] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2020] [Revised: 03/08/2020] [Accepted: 03/26/2020] [Indexed: 12/31/2022]
Abstract
Iron(III) and nickel(II) complexes bearing a thiosemicarbazone framework were synthesized by a one-pot synthesis method. The structures were characterized by elemental analysis, IR, 1 H NMR, APCI Mass, conductivity, magnetic moment measurements. Molecular and crystal structures of the iron(III) complex were obtained from single-crystal X-ray diffraction. The findings showed that the metal atom adopts a slightly distorted square-pyramidal coordination, with the four donor atoms of the thiosemicarbazone ligand defining the basal plane and a chloride atom occupying the apical position. In the crystal lattice, the structure is stabilized by intermolecular O─H···O and C─H···O interactions. The cytotoxic activity was studied by MTT assay, the expression levels of cytochrome P450 (CYP) enzymes by Western blot, and the lipophilicity (LogP) by using the shake-flask method, another pharmacokinetic parameter. The findings showed that the IC50 values decreased with the decrease of the LogP values of the substances. Cytochrome P450 expression levels were found specific for each compound and each cell line. As a result, the pharmacokinetic properties of the newly synthesized thiosemicarbazone compounds are crucial for oral administration and provide us with clues for prospective in vivo studies.
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Affiliation(s)
- Mediha Süleymanoğlu
- Department of Medical Biology, Istanbul Faculty of Medicine, Istanbul University, Çapa, Istanbul, Turkey
| | - Serap Erdem-Kuruca
- Department of Physiology, Istanbul Faculty of Medicine, Istanbul University, Çapa, Istanbul, Turkey
| | - Tülay Bal-Demirci
- Department of Chemistry, Engineering Faculty, Istanbul University-Cerrahpasa, Avcilar, Istanbul, Turkey
| | - Namık Özdemir
- Department of Mathematics and Science Education, Faculty of Education, Ondokuz Mayıs University, Samsun, Turkey
| | - Bahri Ülküseven
- Department of Chemistry, Engineering Faculty, Istanbul University-Cerrahpasa, Avcilar, Istanbul, Turkey
| | - İlhan Yaylım
- Department of Molecular Medicine, Aziz Sancar Institute of Experimental Medicine, Istanbul University, Çapa, Istanbul, Turkey
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Bal-Demirci T, Güveli Ş, Yeşilyurt S, Özdemir N, Ülküseven B. Thiosemicarbazone ligand, nickel(II) and ruthenium(II) complexes based on vitamin B6 vitamer: The synthesis, different coordination behaviors and antioxidant activities. Inorganica Chim Acta 2020. [DOI: 10.1016/j.ica.2019.119335] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
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Avcu Altiparmak E, Erdemir G, Özdemir N, Kuruca SE, Bal-Demirci T. Cu(ii) salen and 1,2,4-triazole complexes from thiosemicarbazone: synthesis, physicochemical and structural properties and cytotoxic activities. NEW J CHEM 2020. [DOI: 10.1039/c9nj04455h] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
The complexes were synthesized from reaction of salicylaldehydethiosemicarbazone and ethylenediamine in the presence of CuCl2.
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Affiliation(s)
- Elif Avcu Altiparmak
- Department of Chemistry
- Engineering Faculty
- İstanbul University-Cerrahpaşa
- 34320 İstanbul
- Turkey
| | - Gökçe Erdemir
- Istanbul University
- Aziz Sancar Institute of Experimental Medicine
- Department of Molecular Medicine
- Istanbul
- Turkey
| | - Namık Özdemir
- Department of Mathematics and Science Education
- Faculty of Education
- Ondokuz Mayıs University
- 55139 Samsun
- Turkey
| | - Serap Erdem Kuruca
- Istanbul University
- Faculty of Medicine
- Department of Physiology
- Istanbul
- Turkey
| | - Tülay Bal-Demirci
- Department of Chemistry
- Engineering Faculty
- İstanbul University-Cerrahpaşa
- 34320 İstanbul
- Turkey
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Rocha MVJ, Vilhena FS, Signorelli MRM, de M Carneiro JW, Ramalho TC, Costa LT. Structure and bonding in triorganotin chlorides: a perspective from energy decomposition analysis. J Mol Model 2019; 25:279. [PMID: 31463808 DOI: 10.1007/s00894-019-4144-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2019] [Accepted: 08/08/2019] [Indexed: 11/29/2022]
Abstract
The Sn-Cl chemical bond of four organotin halides (Me3SnCl, Et3SnCl, Bu3SnCl, and Ph3SnCl) was studied by using relativistic density functional theory in combination with a quantitative energy decomposition analysis to explain the formation of charged species. The σ orbital is the dominant contributor to the stabilization of the Sn-Cl bond, and the π-orbital interactions also have a significant contribution to the stabilization of Ph3Sn+ cation when the aromatic groups are bonded to the tin atom. The aromaticity of the phenyl groups delocalizes the positive charge, donating electrons to tin atom by conjugation. Although Me3SnCl and Ph3SnCl are constituted by groups which the size of the substituents is different, the interaction energies obtained with the energy decomposition analysis present similar values, which also occur with the thermodynamic parameters. Graphical abstract Organotin compounds have widely studied as a potential antitumoral agent. The mechanism in triorganotin compounds includes the formation of cation species, R3Sn+. This article studies the influence of the R groups on the rupture of Sn-Cl bond using the fragment analysis and quantitative energy decomposition analysis.
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Affiliation(s)
- Marcus V J Rocha
- Instituto de Química, Departamento de Físico-Química, Universidade Federal Fluminense (UFF), Outeiro de São João Batista, s/n, Niterói, Rio de Janeiro, 24020-141, Brazil.,Departamento de Química, Universidade Federal de Lavras (UFLA), Campus Universitário, s/n, Lavras, Minas Gerais, 37200-000, Brazil
| | - Felipe S Vilhena
- Instituto de Química, Departamento de Físico-Química, Universidade Federal Fluminense (UFF), Outeiro de São João Batista, s/n, Niterói, Rio de Janeiro, 24020-141, Brazil
| | - Matheus R M Signorelli
- Instituto de Química, Departamento de Físico-Química, Universidade Federal Fluminense (UFF), Outeiro de São João Batista, s/n, Niterói, Rio de Janeiro, 24020-141, Brazil
| | - José W de M Carneiro
- Instituto de Química, Departamento de Físico-Química, Universidade Federal Fluminense (UFF), Outeiro de São João Batista, s/n, Niterói, Rio de Janeiro, 24020-141, Brazil
| | - Teodorico C Ramalho
- Departamento de Química, Universidade Federal de Lavras (UFLA), Campus Universitário, s/n, Lavras, Minas Gerais, 37200-000, Brazil
| | - Luciano T Costa
- Instituto de Química, Departamento de Físico-Química, Universidade Federal Fluminense (UFF), Outeiro de São João Batista, s/n, Niterói, Rio de Janeiro, 24020-141, Brazil.
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Theoretical aspect of the bonding in bis-chelate thiosemicarbazones nickel (II) complexes: A DFT study. J Mol Struct 2018. [DOI: 10.1016/j.molstruc.2017.09.062] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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