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Oliveira WC, Diniz RMCS, Rodrigues JO, de Sousa FF, dos Santos CC, Sinfrônio FSM, Ferreira FF, da Silva Filho JG, de Menezes AS. Spherulite-like Ni(II)(l-glutaminato·H 2O) 2 Complex: Morphological Microstructure, DFT-Assisted Crystal Structure Determination, and Vibrational Analysis. ACS OMEGA 2025; 10:9503-9513. [PMID: 40092799 PMCID: PMC11904666 DOI: 10.1021/acsomega.4c10609] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/21/2024] [Revised: 02/12/2025] [Accepted: 02/24/2025] [Indexed: 03/19/2025]
Abstract
l-glutamine complexes with transition metals have already been reported in the literature, but there have been no studies on l-glutamine complexes with Ni2+. Here, the new polycrystalline spherulite-like Ni(II)(l-glutaminato·H2O)2 complex was synthesized, and powder X-ray diffraction (PXRD) measurements and density functional theory (DFT) calculations were performed to determine its crystal structure. SEM images revealed the beautiful morphological microstructure of the new spherulite-like complex's surface and internal region. Thermogravimetric analysis (TGA) and vibrational spectroscopic techniques (infrared and Raman) were also performed. A mass loss observed at around 160 °C, equivalent to the mass of two water molecules, was determined by TGA. DFT calculations were initially performed to generate the most stable molecule and assist in crystal structure determination using the PXRD data. Five conformations of the complex were established, and these structures were optimized with the B3LYP hybrid functional and Def2-tzvp basis function for the nickel atom and 6-311++G(d,p) for the other atoms. Scanning calculations were performed to construct the potential energy surfaces and identify the most stable structure. From a PXRD measurement and the possible configurations of the optimized molecules, the Ni(II)(l-glutaminato·H2O)2 crystal structure was solved using a simulated annealing approach. The new compound crystallized in a triclinic system with a P1̅ space group.
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Affiliation(s)
- Wesley
K. C. Oliveira
- Department
of Physics, CCET, Federal University of
Maranhão - UFMA, 65080-805, São Luís, MA, Brazil
| | - Raisa M. C. S. Diniz
- Department
of Mathematics and Informatics, State University
of Maranhão - UEMA, 65055-310, São Luís, MA, Brazil
| | - Jéssica
A. O. Rodrigues
- Center
for Social Sciences, Health, and Technology, Federal University of Maranhão - UFMA, 65900-410, Imperatriz, MA, Brazil
| | - Francisco F. de Sousa
- Center
for Social Sciences, Health, and Technology, Federal University of Maranhão - UFMA, 65900-410, Imperatriz, MA, Brazil
- Institute
of Exact and Natural Sciences, Federal University
of Para - UFPA, 66075-110, Belem, PA, Brazil
| | - Clenilton C. dos Santos
- Department
of Physics, CCET, Federal University of
Maranhão - UFMA, 65080-805, São Luís, MA, Brazil
| | - Francisco S. M. Sinfrônio
- Department
of Electrical Engineering, Federal University
of Maranhão, CCET, 65080-805, São Luís, MA, Brazil
- Institute
of Chemistry, Federal University of Rio
Grande do Norte - UFRN, 59078-970, Natal, RN, Brazil
| | - Fabio F. Ferreira
- Center for
Natural and Human Sciences, Federal University
of ABC (UFABC), 09210-580, Santo Andre, SP, Brazil
| | - José G. da Silva Filho
- Faculdade
de Educação, Ciências e Letras do Sertão
Central, Universidade Estadual do Ceará
- UECE, 63902-098, Quixada, CE, Brazil
| | - Alan S. de Menezes
- Department
of Physics, CCET, Federal University of
Maranhão - UFMA, 65080-805, São Luís, MA, Brazil
- Center
for Social Sciences, Health, and Technology, Federal University of Maranhão - UFMA, 65900-410, Imperatriz, MA, Brazil
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Copper(II) coordination polymer based on l-arginine as a supramolecular hybrid inorganic–organic material: synthesis, structural, spectroscopic and magnetic properties. RESEARCH ON CHEMICAL INTERMEDIATES 2023. [DOI: 10.1007/s11164-023-04957-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/10/2023]
Abstract
AbstractWe report the synthesis and structural, spectroscopic and magnetic properties of new 1D coordination polymeric complex {[Cu(μ-l-Arg)2]SO4⋅1.5H2O}n (1) that contains asymmetric μ−O,O’ carboxylic bridge linking distorted square-pyramidal [Cu(μ-l-Arg)2]2+ coordination units. In 1D, the syn−anti−μ2−η1:η1zigzag polymer conformation, the adjacent Cu(II) ions are distanced by 5.707 Å, and the subsequent Cu∙∙∙Cu proximity in 1D-coordination chain equals 6.978 Å. Detailed interpretation of IR and Raman spectra of l-arginine and 1 was performed. The principal components of the g tensor determined from EPR experiments (gx = 2.059, gy = 2.075, gz = 2.228) indicate nearly axial symmetry of Cu(II) coordination sphere and correspond to the unpaired electron occupying the dx2–y2 orbital. The single broad band at 16,200 cm–1, characteristic of d−d transition, is assigned to the dominant dublet-dublet 2B1g(dx2–y2)→ 2Eg(dyz≈dxz) transition. Magnetic susceptibility measurements have revealed ferromagnetic coupling between the Cu(II) ions within the 1D-coordination chain, while the intermolecular coupling is antiferromagnetic.
Graphical Abstract
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3
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Kochel A, Hołyńska M, Twaróg K, Jezierska A, Panek JJ, Wojaczyński J. A new mixed-valence Cu I/Cu II three-dimensional coordination polymer constructed with an N, O-donor ligand generated via solvothermal synthesis: structural features and magnetic properties. ACTA CRYSTALLOGRAPHICA SECTION C STRUCTURAL CHEMISTRY 2022; 78:405-413. [DOI: 10.1107/s2053229622005812] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/02/2022] [Accepted: 05/30/2022] [Indexed: 11/11/2022]
Abstract
A new mixed-valence CuI/CuII three-dimensional coordination polymer, poly[[diaquabis[μ4-2-(pyrazin-2-yl)quinoline-4-carboxylato]dicopper(I)copper(II)] bis(tetrafluoridoborate)], {[Cu3(C14H8N3O2)2(H2O)2](BF4)2}
n
, was synthesized and characterized, with 2-(pyrazin-2-yl)quinoline-4-carboxylic acid being employed as a linker ligand. The ligand was isolated as its hydrochloride salt, 4-carboxy-2-(pyrazin-2-yl)quinolin-1-ium chloride dihydrate, C14H10N3O2
+·Cl−·2H2O. The compounds show luminescence at 550 nm for the ligand and at 565 nm for the polymer at 297 K. The ligand structure was rationalized by means of quantum-chemical calculations, which led to a similar conformation to that determined from X-ray diffraction studies.
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Husain A, Rani P, Nar KK, Singh AP, Kumar R, Bhasin KK, Kumar G. A tryptophan-based copper(ii) coordination polymer: catalytic activity towards Suzuki–Miyaura cross-coupling reactions. CrystEngComm 2021. [DOI: 10.1039/d1ce01282g] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Abstract
An unusual tryptophan coordination mode with copper(ii) wherein l-tryp is coordinated through the carboxylate and amine groups. A heterogeneous catalyst for the Suzuki cross-coupling reaction with ∼98% yield under normal reaction conditions.
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Affiliation(s)
- Ahmad Husain
- Department of Chemistry, DAV University, Jalandhar-144012, Punjab, India
| | - Pooja Rani
- Department of Chemistry & Centre for Advanced Studies in Chemistry, Panjab University Chandigarh, Chandigarh, India
| | - Kuldeep Kaur Nar
- Department of Chemistry, DAV University, Jalandhar-144012, Punjab, India
| | - Amit Pratap Singh
- Department of Applied Sciences, National Institute of Technology, New Delhi-110040, India
| | - Rakesh Kumar
- Department of Chemistry, MCM DAV College, Kangra-176001, Himachal Pradesh, India
| | - K. K. Bhasin
- Department of Chemistry & Centre for Advanced Studies in Chemistry, Panjab University Chandigarh, Chandigarh, India
| | - Girijesh Kumar
- Department of Chemistry & Centre for Advanced Studies in Chemistry, Panjab University Chandigarh, Chandigarh, India
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Yurtaeva S, Gilmutdinov IF, Rodionov AA, Zaripov RB, Kutyreva MP, Bondar OV, Nedopekin OV, Khafizov NR, Kadkin ON. Ferromagnetically Coupled Copper(II) Clusters Incorporated in Functionalized Boltorn H30 Hyperbranched Polymer Architecture: ESR, Magnetic Susceptibility Measurements, and Quantum-Chemical Calculations. ACS OMEGA 2019; 4:16450-16461. [PMID: 31616823 PMCID: PMC6787908 DOI: 10.1021/acsomega.9b02048] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/04/2019] [Accepted: 09/05/2019] [Indexed: 06/10/2023]
Abstract
The unusual temperature behavior of the electron spin resonance (ESR) spectra and magnetic properties are experimentally observed in copper(II) complexes with a dendritic ligand based on the Boltorn H30 polymer (Perstorp Specialty Chemicals AB, Sweden) functionalized with fumaric acid residues in a molar ratio of 1:6. The ESR spectra at low temperatures show signs of transition to higher spin states at temperatures below 8-10 K, and the temperature dependences of the integral ESR signal intensities and magnetic susceptibility show the positive deviation from the Curie-Weiss law, thereby pointing to the presence of ferromagnetic exchange interactions in the system under study. The values of the exchange interaction parameters are calculated by quantum-chemical simulation of the possible structure of the copper(II) complex when assuming the formation of trinuclear coordination sites embedded in the hyperbranched polymer structure. The results of density functional theory calculations indicate the possibility of ferromagnetic exchange through carboxylate bridges in the trinuclear magnetic clusters, and the calculated values of the exchange interaction parameters make it possible to construct theoretical curves of the temperature dependence of the effective magnetic moment, which satisfactorily fit the experimental data, especially considering that polymers are characterized by disperse molecular weights and chemical structures.
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Affiliation(s)
- Svetlana
V. Yurtaeva
- Zavoisky
Kazan Physical-Technical Institute, Federal Research Center Kazan
Scientific Center, Russian Academy of Sciences, ul. Sibirskii Trakt 10/7, Kazan 420029 Russia
| | - Ildar F. Gilmutdinov
- Institute
of Physics, Kazan Federal University, ul. Kremlevskaya 16a, Kazan 420008, Russia
| | - Aleksandr A. Rodionov
- Institute
of Physics, Kazan Federal University, ul. Kremlevskaya 16a, Kazan 420008, Russia
| | - Ruslan B. Zaripov
- Zavoisky
Kazan Physical-Technical Institute, Federal Research Center Kazan
Scientific Center, Russian Academy of Sciences, ul. Sibirskii Trakt 10/7, Kazan 420029 Russia
| | - Marianna P. Kutyreva
- Alexander
Butlerov Institute of Chemistry, Kazan Federal
University, ul. Lobachevskogo 1/29, Kazan 420008, Russia
| | - Olga V. Bondar
- Alexander
Butlerov Institute of Chemistry, Kazan Federal
University, ul. Lobachevskogo 1/29, Kazan 420008, Russia
| | - Oleg V. Nedopekin
- Institute
of Physics, Kazan Federal University, ul. Kremlevskaya 16a, Kazan 420008, Russia
| | - Nail R. Khafizov
- Alexander
Butlerov Institute of Chemistry, Kazan Federal
University, ul. Lobachevskogo 1/29, Kazan 420008, Russia
| | - Oleg N. Kadkin
- Alexander
Butlerov Institute of Chemistry, Kazan Federal
University, ul. Lobachevskogo 1/29, Kazan 420008, Russia
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Nie Q, Qian J, Zhang C. Solvothermal synthesis, structure and properties of heterometallic coordination polymer based on metalloligand and alkaline-earth metal calcium. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2019.03.045] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
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7
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Deilami AB, Salehi M, Amiri A, Arab A. New copper(II) and vanadium(IV) complexes based on allylamine-derived Schiff base ligand; synthesis, crystal structure, electrochemical properties and DFT calculations. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2018.12.031] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
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8
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Bikas R, Ajormal F, Emami M, Sanchiz J, Noshiranzadeh N, Kozakiewicz A. Crystal structure and magneto-structural investigation of alkoxido bridged dinuclear Fe(III) complexes with 1,3-oxazolidine ligands. Polyhedron 2019. [DOI: 10.1016/j.poly.2019.01.035] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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9
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Emami M, Bikas R, Noshiranzadeh N, Sanchiz J, Ślepokura K, Lis T. Synthesis, characterization and magnetic properties of phenoxido bridged dinuclear iron(III) complex with bis(phenolate) ligand. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2018.12.004] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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