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Khadanga L, Roopan SM. Synthesis of propargylamine: pioneering a green path with non-conventional KA 2 coupling approach. Mol Divers 2024; 28:4635-4650. [PMID: 38687398 DOI: 10.1007/s11030-024-10826-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2024] [Accepted: 02/20/2024] [Indexed: 05/02/2024]
Abstract
The KA2 coupling reaction is a well-explored and versatile method for forming C-C bonds in synthetic chemistry. It is composed of ketone, amine, and alkyne, which play a major role in the synthesis of propargylamines, known for their diverse biological activities and are used in treating neurogenetical disorders. The KA2 coupling is highly challenging due to the low reactivity of ketimines toward nucleophilic attacks with metal acetylide intermediates formed by activating the C-H bond of the alkyne. Despite predominant studies conducted on thermal conditions for KA2 coupling reactions, green and sustainable approaches like non-conventional methods still have a lot to achieve. This review article provides a comprehensive introduction to the non-conventional approach in the KA2 coupling reaction, outlining its mechanisms and exploring future aspects.
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Affiliation(s)
- Lambodar Khadanga
- Chemistry of Heterocycles and Natural Product Research Laboratory, Department of Chemistry, School of Advanced Sciences, Vellore Institute of Technology, Vellore, Tamil Nadu, 632 014, India
| | - Selvaraj Mohana Roopan
- Chemistry of Heterocycles and Natural Product Research Laboratory, Department of Chemistry, School of Advanced Sciences, Vellore Institute of Technology, Vellore, Tamil Nadu, 632 014, India.
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2
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Zheng Y, Zhang R, Chen M, Zhou Q, Wu Y, Xue W. Design, Synthesis, and Antibacterial Evaluation of Novel Isoindolin-1-ones Derivatives Containing Piperidine Fragments. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2024; 72:12434-12444. [PMID: 38775141 DOI: 10.1021/acs.jafc.3c09928] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2024]
Abstract
A series of novel isoindoline-1-one derivatives containing piperidine moiety were designed and synthesized using natural compounds as raw materials, and their biological activities were tested for three bacterial and three fungal pathogens. These derivatives exhibited good against phytopathogenic bacteria activities against Pseudomonas syringae pv actinidiae (Psa) and Xanthomonas axonopodis pv.citri (Xac). Some compounds exhibited excellent antibacterial activities against Xanthomonas oryzae pv oryzae (Xoo). The dose of Y8 against Xoo (the maximum half lethal effective concentration (EC50) = 21.3 μg/mL) was better than that of the thiediazole copper dose (EC50 = 53.3 μg/mL). Excitingly, further studies have shown that the molecular docking of Y8 with 2FBW indicates that it can fully locate the interior of the binding pocket through hydrogen bonding and hydrophobic interactions, thereby enhancing its anti-Xoo activity. Scanning electron microscopy (SEM) studies revealed that Y8 induced the Xoo cell membrane collapse. Moreover, the proteomic results also indicate that Y8 may be a multifunctional candidate as it affects the formation of bacterial Xoo biofilms, thereby exerting antibacterial effects.
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Affiliation(s)
- Yuguo Zheng
- State Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for R&D of Fine Chemical of Guizhou University, Huaxi District Guiyang 550025, China
- The Key Laboratory of Chemical Synthesis and Environmental Pollution Control-Remediation Technology of Guizhou Province, Xingyi Normal University for Nationalities, Xingyi 562400, China
| | - Renfeng Zhang
- The Key Laboratory of Chemical Synthesis and Environmental Pollution Control-Remediation Technology of Guizhou Province, Xingyi Normal University for Nationalities, Xingyi 562400, China
| | - Mei Chen
- The Key Laboratory of Chemical Synthesis and Environmental Pollution Control-Remediation Technology of Guizhou Province, Xingyi Normal University for Nationalities, Xingyi 562400, China
| | - Qing Zhou
- State Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for R&D of Fine Chemical of Guizhou University, Huaxi District Guiyang 550025, China
| | - Yongjun Wu
- State Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for R&D of Fine Chemical of Guizhou University, Huaxi District Guiyang 550025, China
| | - Wei Xue
- State Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for R&D of Fine Chemical of Guizhou University, Huaxi District Guiyang 550025, China
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Manikanttha M, Deepti K, Tej MB, Tej MB, Gopi Reddy A, Kapavarapu R, Barange DK, V Basaveswara Rao M, Pal M. Ultrasound assisted Cu-catalyzed Ullmann-Goldberg type coupling-cyclization in a single pot: Synthesis and in silico evaluation of 11 H-pyrido[2,1- b]quinazolin-11-ones against SARS-CoV-2 RdRp. J Mol Struct 2023; 1280:135044. [PMID: 36743447 PMCID: PMC9884102 DOI: 10.1016/j.molstruc.2023.135044] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2022] [Revised: 01/13/2023] [Accepted: 01/26/2023] [Indexed: 01/30/2023]
Abstract
The in silico evaluation of 11H-pyrido[2,1-b]quinazolin-11-one derivatives against SARS-CoV-2 RdRp was undertaken based on the reports on antiviral activities of this class of compounds in addition to the promising interactions of the antiviral drug penciclovir as well as quinazoline derivatives with SARS-CoV-2 RdRp in silico. The target compounds were prepared via an Ullmann-Goldberg type coupling followed by the subsequent cyclization (involving amidation) in a single pot. The methodology involved a CuI-catalyzed reaction of 2-iodobenzoate ester with 2-aminopyridine or quinolin-2-amine or thiazol-2-amine under ultrasound to give the expected products in acceptable (51-93%) yields. The molecular interactions of the synthesized 11H-pyrido[2,1-b]quinazolin-11-one derivatives with the SARS-CoV-2 RdRp (PDB: 7AAP) were evaluated in silico. The study suggested that though none of these compounds showed interactions better than penciclovir but the compound 3a and 3n appeared to be comparable along with 3b seemed to be nearly comparable to favipiravir and remdesivir. The compound 3n with the best binding energy (-79.85 Kcal/mol) participated in the H-bond interactions through its OMe group with THR556 as well as ARG624 and via the N-5 atom with the residue SER682. The in silico studies further suggested that majority of the compounds interacted with the main cavity of active site pocket whereas 3h and 3o that showed relatively lower binding energies (-66.06 and -66.28 Kcal/mol) interacted with the shallow cavity underneath the active site of SARS CoV-2 RdRp. The study also revealed that a OMe group was favourable for interaction with respect to its position in the order C-8 > C-1 > C-2. Further, the presence of a fused quinoline ring was tolerated whereas a fused thiazole ring decreased the interaction significantly. The in silico predictions of pharmacokinetic properties of 3a, 3b and 3n indicated that besides the BBB (Blood Brain Barrier) penetration potential these molecules may show a good overall ADME. Overall, the regioisomers 3a, 3b and 3n have emerged as molecules of possible interest in the context of targeting COVID-19.
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Affiliation(s)
- Matta Manikanttha
- Department of Chemistry, Koneru Lakshmaiah Education Foundation, Greenfields, Vaddeswaram, Guntur, Andhra Pradesh 522 502, India
| | - Kolli Deepti
- Department of Chemistry, Koneru Lakshmaiah Education Foundation, Greenfields, Vaddeswaram, Guntur, Andhra Pradesh 522 502, India
| | - Mandava Bhuvan Tej
- Department of Healthcare informatics, Sacred Heart University, 5151 Park Avenue, Fair fields, Connecticut CT06825, USA
| | - Mandava Bhagya Tej
- Department of MBBS, NRI Academi of Medical Sciences, Chinakakani, Guntur, Andhra Pradesh 522503, India
| | - A. Gopi Reddy
- Department of Pharmaceutical Chemistry, SANA College of Pharmacy, Kodad, Telangana, India
| | - Ravikumar Kapavarapu
- Department of Pharmaceutical Chemistry and Phytochemistry, Nirmala College of Pharmacy, Mangalagiri, Andhra Pradesh, India
| | | | - M. V Basaveswara Rao
- Department of Chemistry, Krishna University, Krishna District, Andhra Pradesh, India,Corresponding authors
| | - Manojit Pal
- Dr. Reddy's Institute of Life Sciences, University of Hyderabad Campus, Hyderabad 500046, India,Corresponding authors
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Sonochemical synthesis and biological evaluation of isoquinolin-1(2H)-one/isoindolin-1-one derivatives: Discovery of a positive ago-allosteric modulator (PAAM) of 5HT2CR. Bioorg Chem 2022; 129:106202. [DOI: 10.1016/j.bioorg.2022.106202] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2022] [Revised: 09/12/2022] [Accepted: 10/07/2022] [Indexed: 11/23/2022]
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Mardjan MID, Hariadi MF, Putri IM, Musyarrofah NA, Salimah M, Priatmoko, Purwono B, Commeiras L. Ultrasonic-assisted-synthesis of isoindolin-1-one derivatives. RSC Adv 2022; 12:19016-19021. [PMID: 35873335 PMCID: PMC9241359 DOI: 10.1039/d2ra02720h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2022] [Accepted: 06/15/2022] [Indexed: 11/21/2022] Open
Abstract
A small library of 3-hydroxyisoindolin-1-ones has been prepared from 3-alkylidenephtalides under ultrasonic irradiation. This practical synthesis is featured by group tolerance, high efficiency and yields. The reaction can also be performed in multigram scale and be further extended to access other motifs of isoindolin-1-ones in a one-pot fashion. Functionalized isoindolin-1-ones have been prepared in short reaction time and excellent yields from 3-alkylidenephtalides and primary amines under ultrasonic irradiation.![]()
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Affiliation(s)
- Muhammad Idham Darussalam Mardjan
- Department of Chemistry, Faculty of Mathematics and Natural Sciences, Universitas Gadjah Mada Bulaksumur POS BLS 21 Yogyakarta 55281 Indonesia
| | - Muhamad Fadhly Hariadi
- Department of Chemistry, Faculty of Mathematics and Natural Sciences, Universitas Gadjah Mada Bulaksumur POS BLS 21 Yogyakarta 55281 Indonesia
| | - Indah Mutiara Putri
- Department of Chemistry, Faculty of Mathematics and Natural Sciences, Universitas Gadjah Mada Bulaksumur POS BLS 21 Yogyakarta 55281 Indonesia
| | - Nilna Amalia Musyarrofah
- Department of Chemistry, Faculty of Mathematics and Natural Sciences, Universitas Gadjah Mada Bulaksumur POS BLS 21 Yogyakarta 55281 Indonesia
| | - Muflihah Salimah
- Department of Chemistry, Faculty of Mathematics and Natural Sciences, Universitas Gadjah Mada Bulaksumur POS BLS 21 Yogyakarta 55281 Indonesia
| | - Priatmoko
- Department of Chemistry, Faculty of Mathematics and Natural Sciences, Universitas Gadjah Mada Bulaksumur POS BLS 21 Yogyakarta 55281 Indonesia
| | - Bambang Purwono
- Department of Chemistry, Faculty of Mathematics and Natural Sciences, Universitas Gadjah Mada Bulaksumur POS BLS 21 Yogyakarta 55281 Indonesia
| | - Laurent Commeiras
- Aix Marseille Univ., CNRS, Centrale Marseille, iSm2 Marseille 13013 France
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