1
|
Wang S, Sun Z, Martinez-Tejada LA, Yoshimura N. Comparison of autism spectrum disorder subtypes based on functional and structural factors. Front Neurosci 2024; 18:1440222. [PMID: 39429701 PMCID: PMC11486766 DOI: 10.3389/fnins.2024.1440222] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2024] [Accepted: 09/19/2024] [Indexed: 10/22/2024] Open
Abstract
Autism spectrum disorder (ASD) is a series of neurodevelopmental disorders that may affect a patient's social, behavioral, and communication abilities. As a typical mental illness, ASD is not a single disorder. ASD is often divided into subtypes, such as autism, Asperger's, and pervasive developmental disorder-not otherwise specified (PDD-NOS). Studying the differences among brain networks of the subtypes has great significance for the diagnosis and treatment of ASD. To date, many studies have analyzed the brain activity of ASD as a single mental disorder, whereas few have focused on its subtypes. To address this problem, we explored whether indices derived from functional and structural magnetic resonance imaging (MRI) data exhibited significant dissimilarities between subtypes. Utilizing a brain pattern feature extraction method from fMRI based on tensor decomposition, amplitude of low-frequency fluctuation and its fractional values of fMRI, and gray matter volume derived from MRI, impairments of function in the subcortical network and default mode network of autism were found to lead to major differences from the other two subtypes. Our results provide a systematic comparison of the three common ASD subtypes, which may provide evidence for the discrimination between ASD subtypes.
Collapse
Affiliation(s)
- Shan Wang
- Department of Information and Communications Engineering, School of Engineering, Tokyo Institute of Technology, Yokohama, Japan
| | - Zhe Sun
- Graduate School of Medicine, Juntendo University, Tokyo, Japan
- Faculty of Health Data Science, Juntendo University, Tokyo, Japan
| | | | - Natsue Yoshimura
- Department of Computer Science, School of Computing, Tokyo Institute of Technology, Yokohama, Japan
| |
Collapse
|
2
|
Jiao M, Yang S, Xian X, Fotedar N, Liu F. Multi-Modal Electrophysiological Source Imaging With Attention Neural Networks Based on Deep Fusion of EEG and MEG. IEEE Trans Neural Syst Rehabil Eng 2024; 32:2492-2502. [PMID: 38976470 PMCID: PMC11329068 DOI: 10.1109/tnsre.2024.3424669] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/10/2024]
Abstract
The process of reconstructing underlying cortical and subcortical electrical activities from Electroencephalography (EEG) or Magnetoencephalography (MEG) recordings is called Electrophysiological Source Imaging (ESI). Given the complementarity between EEG and MEG in measuring radial and tangential cortical sources, combined EEG/MEG is considered beneficial in improving the reconstruction performance of ESI algorithms. Traditional algorithms mainly emphasize incorporating predesigned neurophysiological priors to solve the ESI problem. Deep learning frameworks aim to directly learn the mapping from scalp EEG/MEG measurements to the underlying brain source activities in a data-driven manner, demonstrating superior performance compared to traditional methods. However, most of the existing deep learning approaches for the ESI problem are performed on a single modality of EEG or MEG, meaning the complementarity of these two modalities has not been fully utilized. How to fuse the EEG and MEG in a more principled manner under the deep learning paradigm remains a challenging question. This study develops a Multi-Modal Deep Fusion (MMDF) framework using Attention Neural Networks (ANN) to fully leverage the complementary information between EEG and MEG for solving the ESI inverse problem, which is termed as MMDF-ANN. Specifically, our proposed brain source imaging approach consists of four phases, including feature extraction, weight generation, deep feature fusion, and source mapping. Our experimental results on both synthetic dataset and real dataset demonstrated that using a fusion of EEG and MEG can significantly improve the source localization accuracy compared to using a single-modality of EEG or MEG. Compared to the benchmark algorithms, MMDF-ANN demonstrated good stability when reconstructing sources with extended activation areas and situations of EEG/MEG measurements with a low signal-to-noise ratio.
Collapse
|
3
|
Multi-Subject Analysis for Brain Developmental Patterns Discovery via Tensor Decomposition of MEG Data. Neuroinformatics 2023; 21:115-141. [PMID: 36001238 DOI: 10.1007/s12021-022-09599-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/04/2022] [Indexed: 01/18/2023]
Abstract
Identification of informative signatures from electrophysiological signals is important for understanding brain developmental patterns, where techniques such as magnetoencephalography (MEG) are particularly useful. However, less attention has been given to fully utilizing the multidimensional nature of MEG data for extracting components that describe these patterns. Tensor factorizations of MEG yield components that encapsulate the data's multidimensional nature, providing parsimonious models identifying latent brain patterns for meaningful summarization of neural processes. To address the need for meaningful MEG signatures for studies of pediatric cohorts, we propose a tensor-based approach for extracting developmental signatures of multi-subject MEG data. We employ the canonical polyadic (CP) decomposition for estimating latent spatiotemporal components of the data, and use these components for group level statistical inference. Using CP decomposition along with hierarchical clustering, we were able to extract typical early and late latency event-related field (ERF) components that were discriminative of high and low performance groups ([Formula: see text]) and significantly correlated with major cognitive domains such as attention, episodic memory, executive function, and language comprehension. We demonstrate that tensor-based group level statistical inference of MEG can produce signatures descriptive of the multidimensional MEG data. Furthermore, these features can be used to study group differences in brain patterns and cognitive function of healthy children. We provide an effective tool that may be useful for assessing child developmental status and brain function directly from electrophysiological measurements and facilitate the prospective assessment of cognitive processes.
Collapse
|
4
|
Jiao M, Liu F, Asan O, Nilchiani R, Ju X, Xiang J. Brain Source Reconstruction Solution Quality Assessment with Spatial Graph Frequency Features. Brain Inform 2022. [DOI: 10.1007/978-3-031-15037-1_15] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
|
5
|
Mannepalli T, Routray A. Sparse algorithms for EEG source localization. Med Biol Eng Comput 2021; 59:2325-2352. [PMID: 34601662 DOI: 10.1007/s11517-021-02444-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2021] [Accepted: 09/14/2021] [Indexed: 11/29/2022]
Abstract
Source localization using EEG is important in diagnosing various physiological and psychiatric diseases related to the brain. The high temporal resolution of EEG helps medical professionals assess the internal physiology of the brain in a more informative way. The internal sources are obtained from EEG by an inversion process. The number of sources in the brain outnumbers the number of measurements. In this article, a comprehensive review of the state-of-the-art sparse source localization methods in this field is presented. A recently developed method, certainty-based-reduced-sparse-solution (CARSS), is implemented and is examined. A vast comparative study is performed using a sixty-four-channel setup involving two source spaces. The first source space has 5004 sources and the other has 2004 sources. Four test cases with one, three, five, and seven simulated active sources are considered. Two noise levels are also being added to the noiseless data. The CARSS is also evaluated. The results are examined. A real EEG study is also attempted. Graphical Abstract.
Collapse
|
6
|
Wang D, Liu Z, Tao Y, Chen W, Chen B, Wang Q, Yan X, Wang G. Improvement in EEG Source Imaging Accuracy by Means of Wavelet Packet Transform and Subspace Component Selection. IEEE Trans Neural Syst Rehabil Eng 2021; 29:650-661. [PMID: 33687844 DOI: 10.1109/tnsre.2021.3064665] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
The electroencephalograph (EEG) source imaging (ESI) method is a non-invasive method that provides high temporal resolution imaging of brain electrical activity on the cortex. However, because the accuracy of EEG source imaging is often affected by unwanted signals such as noise or other source-irrelevant signals, the results of ESI are often incongruous with the real sources of brain activities. This study presents a novel ESI method (WPESI) that is based on wavelet packet transform (WPT) and subspace component selection to image the cerebral activities of EEG signals on the cortex. First, the original EEG signals are decomposed into several subspace components by WPT. Second, the subspaces associated with brain sources are selected and the relevant signals are reconstructed by WPT. Finally, the current density distribution in the cerebral cortex is obtained by establishing a boundary element model (BEM) from head MRI and applying the appropriate inverse calculation. In this study, the localization results obtained by this proposed approach were better than those of the original sLORETA approach (OESI) in the computer simulations and visual evoked potential (VEP) experiments. For epilepsy patients, the activity sources estimated by this proposed algorithm conformed to the seizure onset zones. The WPESI approach is easy to implement achieved favorable accuracy in terms of EEG source imaging. This demonstrates the potential for use of the WPESI algorithm to localize epileptogenic foci from scalp EEG signals.
Collapse
|
7
|
Asadzadeh S, Yousefi Rezaii T, Beheshti S, Delpak A, Meshgini S. A systematic review of EEG source localization techniques and their applications on diagnosis of brain abnormalities. J Neurosci Methods 2020; 339:108740. [DOI: 10.1016/j.jneumeth.2020.108740] [Citation(s) in RCA: 42] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2020] [Revised: 04/13/2020] [Accepted: 04/13/2020] [Indexed: 12/12/2022]
|
8
|
Auboiroux V, Larzabal C, Langar L, Rohu V, Mishchenko A, Arizumi N, Labyt E, Benabid AL, Aksenova T. Space-Time-Frequency Multi-Sensor Analysis for Motor Cortex Localization Using Magnetoencephalography. SENSORS (BASEL, SWITZERLAND) 2020; 20:s20092706. [PMID: 32397472 PMCID: PMC7248938 DOI: 10.3390/s20092706] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2020] [Revised: 05/04/2020] [Accepted: 05/04/2020] [Indexed: 05/31/2023]
Abstract
Brain source imaging and time frequency mapping (TFM) are commonly used in magneto/electro encephalography (M/EEG) imaging. However, these methods suffer from important limitations. Source imaging is based on an ill-posed inverse problem leading to instability of source localization solutions, has a limited capacity to localize high frequency oscillations and loses its robustness for induced responses (ill-defined trigger). The drawback of TFM is that it involves independent analysis of signals from a number of frequency bands, and from co-localized sensors. In the present article, a regression-based multi-sensor space-time-frequency analysis (MSA) approach, which integrates co-localized sensors and/or multi-frequency information, is proposed. To estimate task-specific brain activations, MSA uses cross-validated, shifted, multiple Pearson correlation, calculated from the time-frequency transformed brain signal and the binary signal of stimuli. The results are projected from the sensor space onto the cortical surface. To assess MSA performance, the proposed method was compared to the weighted minimum norm estimate (wMNE) source imaging method, in terms of spatial selectivity and robustness against an ill-defined trigger. Magnetoencephalography (MEG) recordings were performed in fourteen subjects during two motor tasks: finger tapping and elbow flexion/extension. In particular, our results show that the MSA approach provides good localization performance when compared to wMNE and statistically significant improvement of robustness against ill-defined trigger.
Collapse
Affiliation(s)
- Vincent Auboiroux
- Univ. Grenoble Alpes, CEA, LETI, CLINATEC, MINATEC Campus, F-38000 Grenoble, France; (V.A.); (C.L.); (V.R.); (A.M.); (N.A.); (E.L.); (A.-L.B.)
| | - Christelle Larzabal
- Univ. Grenoble Alpes, CEA, LETI, CLINATEC, MINATEC Campus, F-38000 Grenoble, France; (V.A.); (C.L.); (V.R.); (A.M.); (N.A.); (E.L.); (A.-L.B.)
| | - Lilia Langar
- CHU Grenoble Alpes, CLINATEC, F-38000 Grenoble, France;
| | - Victor Rohu
- Univ. Grenoble Alpes, CEA, LETI, CLINATEC, MINATEC Campus, F-38000 Grenoble, France; (V.A.); (C.L.); (V.R.); (A.M.); (N.A.); (E.L.); (A.-L.B.)
| | - Ales Mishchenko
- Univ. Grenoble Alpes, CEA, LETI, CLINATEC, MINATEC Campus, F-38000 Grenoble, France; (V.A.); (C.L.); (V.R.); (A.M.); (N.A.); (E.L.); (A.-L.B.)
| | - Nana Arizumi
- Univ. Grenoble Alpes, CEA, LETI, CLINATEC, MINATEC Campus, F-38000 Grenoble, France; (V.A.); (C.L.); (V.R.); (A.M.); (N.A.); (E.L.); (A.-L.B.)
| | - Etienne Labyt
- Univ. Grenoble Alpes, CEA, LETI, CLINATEC, MINATEC Campus, F-38000 Grenoble, France; (V.A.); (C.L.); (V.R.); (A.M.); (N.A.); (E.L.); (A.-L.B.)
| | - Alim-Louis Benabid
- Univ. Grenoble Alpes, CEA, LETI, CLINATEC, MINATEC Campus, F-38000 Grenoble, France; (V.A.); (C.L.); (V.R.); (A.M.); (N.A.); (E.L.); (A.-L.B.)
| | - Tetiana Aksenova
- Univ. Grenoble Alpes, CEA, LETI, CLINATEC, MINATEC Campus, F-38000 Grenoble, France; (V.A.); (C.L.); (V.R.); (A.M.); (N.A.); (E.L.); (A.-L.B.)
| |
Collapse
|
9
|
Pellegrino G, Hedrich T, Porras-Bettancourt M, Lina JM, Aydin Ü, Hall J, Grova C, Kobayashi E. Accuracy and spatial properties of distributed magnetic source imaging techniques in the investigation of focal epilepsy patients. Hum Brain Mapp 2020; 41:3019-3033. [PMID: 32386115 PMCID: PMC7336148 DOI: 10.1002/hbm.24994] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2019] [Revised: 02/18/2020] [Accepted: 03/11/2020] [Indexed: 02/03/2023] Open
Abstract
Source localization of interictal epileptiform discharges (IEDs) is clinically useful in the presurgical workup of epilepsy patients. We aimed to compare the performance of four different distributed magnetic source imaging (dMSI) approaches: Minimum norm estimate (MNE), dynamic statistical parametric mapping (dSPM), standardized low-resolution electromagnetic tomography (sLORETA), and coherent maximum entropy on the mean (cMEM). We also evaluated whether a simple average of maps obtained from multiple inverse solutions (Ave) can improve localization accuracy. We analyzed dMSI of 206 IEDs derived from magnetoencephalography recordings in 28 focal epilepsy patients who had a well-defined focus determined through intracranial EEG (iEEG), epileptogenic MRI lesions or surgical resection. dMSI accuracy and spatial properties were quantitatively estimated as: (a) distance from the epilepsy focus, (b) reproducibility, (c) spatial dispersion (SD), (d) map extension, and (e) effect of thresholding on map properties. Clinical performance was excellent for all methods (median distance from the focus MNE = 2.4 mm; sLORETA = 3.5 mm; cMEM = 3.5 mm; dSPM = 6.8 mm, Ave = 0 mm). Ave showed the lowest distance between the map maximum and epilepsy focus (Dmin lower than cMEM, MNE, and dSPM, p = .021, p = .008, p < .001, respectively). cMEM showed the best spatial features, with lowest SD outside the focus (SD lower than all other methods, p < .001 consistently) and high contrast between the generator and surrounding regions. The average map Ave provided the best localization accuracy, whereas cMEM exhibited the lowest amount of spurious distant activity. dMSI techniques have the potential to significantly improve identification of iEEG targets and to guide surgical planning, especially when multiple methods are combined.
Collapse
Affiliation(s)
- Giovanni Pellegrino
- Department of Neurology and Neurosurgery, Montreal Neurological Institute, McGill University, Montreal, Quebec, Canada.,IRCCS Fondazione San Camillo Hospital, Venice, Italy.,Department of Multimodal Functional Imaging Lab, Biomedical Engineering, McGill University, Montreal, Quebec, Canada
| | - Tanguy Hedrich
- Department of Multimodal Functional Imaging Lab, Biomedical Engineering, McGill University, Montreal, Quebec, Canada
| | - Manuel Porras-Bettancourt
- Department of Neurology and Neurosurgery, Montreal Neurological Institute, McGill University, Montreal, Quebec, Canada
| | - Jean-Marc Lina
- Departement de Genie Electrique, Ecole de Technologie Superieure, Montreal, Quebec, Canada.,Centre de Recherches Mathematiques, Montréal, Quebec, Canada
| | - Ümit Aydin
- Physics Department and PERFORM Centre, Concordia University, Montreal, Quebec, Canada
| | - Jeffery Hall
- Department of Neurology and Neurosurgery, Montreal Neurological Institute, McGill University, Montreal, Quebec, Canada
| | - Christophe Grova
- Department of Neurology and Neurosurgery, Montreal Neurological Institute, McGill University, Montreal, Quebec, Canada.,Department of Multimodal Functional Imaging Lab, Biomedical Engineering, McGill University, Montreal, Quebec, Canada.,Centre de Recherches Mathematiques, Montréal, Quebec, Canada.,Physics Department and PERFORM Centre, Concordia University, Montreal, Quebec, Canada
| | - Eliane Kobayashi
- Department of Neurology and Neurosurgery, Montreal Neurological Institute, McGill University, Montreal, Quebec, Canada
| |
Collapse
|
10
|
Tensor decomposition of TMS-induced EEG oscillations reveals data-driven profiles of antiepileptic drug effects. Sci Rep 2019; 9:17057. [PMID: 31745223 PMCID: PMC6864053 DOI: 10.1038/s41598-019-53565-9] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2019] [Accepted: 10/30/2019] [Indexed: 12/23/2022] Open
Abstract
Transcranial magnetic stimulation combined with electroencephalography is a powerful tool to probe human cortical excitability. The EEG response to TMS stimulation is altered by drugs active in the brain, with characteristic “fingerprints” obtained for drugs of known mechanisms of action. However, the extraction of specific features related to drug effects is not always straightforward as the complex TMS-EEG induced response profile is multi-dimensional. Analytical approaches can rely on a-priori assumptions within each dimension or on the implementation of cluster-based permutations which do not require preselection of specific limits but may be problematic when several experimental conditions are tested. We here propose an alternative data-driven approach based on PARAFAC tensor decomposition, which provides a parsimonious description of the main profiles underlying the multidimensional data. We validated reliability of PARAFAC on TMS-induced oscillations before extracting the features of two common anti-epileptic drugs (levetiracetam and lamotrigine) in an integrated manner. PARAFAC revealed an effect of both drugs, significantly suppressing oscillations in the alpha range in the occipital region. Further, this effect was stronger under the intake of levetiracetam. This study demonstrates, for the first time, that PARAFAC can easily disentangle the effects of subject, drug condition, frequency, time and space in TMS-induced oscillations.
Collapse
|
11
|
Pillain A, Rahmouni L, Andriulli F. Handling anisotropic conductivities in the EEG forward problem with a symmetric formulation. Phys Med Biol 2019; 64:035022. [PMID: 30577034 DOI: 10.1088/1361-6560/aafaaf] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
The electroencephalography (EEG) forward problem, the computation of the electric potential generated by a known electric current source configuration in the brain, is a key step of EEG source analysis. In this problem, it is often desired to model the anisotropic conductivity profiles of the skull and of the white matter. These profiles, however, cannot be handled by standard surface integral formulations and the use of volume finite elements is required. Leveraging on the representation theorem using an anisotropic fundamental solution, this paper proposes a modified symmetric formulation for solving the EEG forward problem by a surface integral equation which can take into account anisotropic conductivity profiles. A set of numerical results is presented to corroborate theoretical treatments and to show the impact of the proposed approach on both canonical and real case scenarios.
Collapse
Affiliation(s)
- Axelle Pillain
- Computational Electromagnetics Research Laboratory, IMT Atlantique, Brest, France
| | | | | |
Collapse
|
12
|
Performance of source imaging techniques of spatially extended generators of uterine activity. INFORMATICS IN MEDICINE UNLOCKED 2019. [DOI: 10.1016/j.imu.2019.100167] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
|
13
|
Mannepalli T, Routray A. Certainty-Based Reduced Sparse Solution for Dense Array EEG Source Localization. IEEE Trans Neural Syst Rehabil Eng 2019; 27:172-178. [PMID: 30596580 DOI: 10.1109/tnsre.2018.2889719] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
The EEG source localization is an ill-posed problem. It involves estimation of the sources which outnumbers the number of measurements. For a given measurement at a given time all sources are not active this makes the problem as sparse inversion problem. This paper presents a new approach for dense array EEG source localization. This paper aims at reducing the solution space to only most certain sources and thereby reducing the problem of ill-posedness. This employs a two-stage method, where the first stage finds the most certain sources that are likely to produce the observed EEG by using a statistical measure of sources, the second stage solves the inverse problem by restricting the solution space to only most certain sources and their neighbors. This reduces the solution space for other source localization methods hence improvise their accuracy in localizing the active neurological sources in the brain. This method has been validated and applied to real 256 channel data and the results were analyzed.
Collapse
|
14
|
Domino M, Domino K, Gajewski Z. An application of higher order multivariate cumulants in modelling of myoelectrical activity of porcine uterus during early pregnancy. Biosystems 2018; 175:30-38. [PMID: 30391263 DOI: 10.1016/j.biosystems.2018.10.019] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2018] [Revised: 10/29/2018] [Accepted: 10/30/2018] [Indexed: 01/18/2023]
Abstract
The analysis of the uterine contraction have become a general practice in an effort to improve the clinical management of uterine contractions during pregnancy and labour in human beings. The fluctuations in uterine activity may occur without affecting progress of gestation, however the painful and fashion contractions may be the first threat of miscarriage. While pigs were considered as an referential preclinical model, the computational modelling of spontaneous myoelectrical activity of complex systems of porcine myometrium in peri-fertilization period has been proposed. The higher order statistic, multivariate cumulants and Joint Skewness Band Selection method, have been applied to study the dependence structure of electromyographic (EMG) signal with an effective EMG feature. Than the model of recognition of multivariate, myoelectricaly changes according to crucial stages for successful fertilization and early pregnancy maintenance has been estimated. We found that considering together time and frequency features of EMG signal was extremely non-Gaussian distributed and the higher order multivariate statistics such as cumulants, have to be used to determine the pattern of myoelectrical activity in reproductive tract. We confirmed the expectance that the probabilistic model changes on a daily base. We demonstrated the changes in proposed model at the crucial time points of in peri-fertilization period. We speculate the activity of the middle of uterine horn and the power (minimum and maximum) and pauses between myoelectrical burst features are essential for the functional role of uterine contractility in peri-fertilization period.
Collapse
Affiliation(s)
- Malgorzata Domino
- Department of Large Animal Diseases with Clinic, Veterinary Research Centre and Center for Biomedical Research, Faculty of Veterinary Medicine, Warsaw University of Life Sciences (WULS - SGGW), Warsaw, Poland
| | - Krzysztof Domino
- Institute of Theoretical and Applied Informatics, Polish Academy of Sciences, Gliwice, Poland
| | - Zdzislaw Gajewski
- Department of Large Animal Diseases with Clinic, Veterinary Research Centre and Center for Biomedical Research, Faculty of Veterinary Medicine, Warsaw University of Life Sciences (WULS - SGGW), Warsaw, Poland.
| |
Collapse
|
15
|
Mattan BD, Kubota JT, Cloutier J. How Social Status Shapes Person Perception and Evaluation: A Social Neuroscience Perspective. PERSPECTIVES ON PSYCHOLOGICAL SCIENCE 2018; 12:468-507. [PMID: 28544863 DOI: 10.1177/1745691616677828] [Citation(s) in RCA: 68] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Abstract
Inferring the relative rank (i.e., status) of others is essential to navigating social hierarchies. A survey of the expanding social psychological and neuroscience literatures on status reveals a diversity of focuses (e.g., perceiver vs. agent), operationalizations (e.g., status as dominance vs. wealth), and methodologies (e.g., behavioral, neuroscientific). Accommodating this burgeoning literature on status in person perception, the present review offers a novel social neuroscientific framework that integrates existing work with theoretical clarity. This framework distinguishes between five key concepts: (1) strategic pathways to status acquisition for agents, (2) status antecedents (i.e., perceptual and knowledge-based cues that confer status rank), (3) status dimensions (i.e., domains in which an individual may be ranked, such as wealth), (4) status level (i.e., one's rank along a given dimension), and (5) the relative importance of a given status dimension, dependent on perceiver and context characteristics. Against the backdrop of this framework, we review multiple dimensions of status in the nonhuman and human primate literatures. We then review the behavioral and neuroscientific literatures on the consequences of perceived status for attention and evaluation. Finally, after proposing a social neuroscience framework, we highlight innovative directions for future social status research in social psychology and neuroscience.
Collapse
Affiliation(s)
| | - Jennifer T Kubota
- 1 Department of Psychology, University of Chicago.,2 Center for the Study of Race, Politics, and Culture, University of Chicago
| | | |
Collapse
|
16
|
Abstract
OBJECTIVE The study of gait in Parkinson's disease is important because it can provide insights into the complex neural system and physiological behaviors of the disease, of which understanding can help improve treatment and lead to effective developments of alternative neural rehabilitation programs. This paper aims to introduce an effective computational method for multichannel or multisensor data analysis of gait dynamics in Parkinson's disease. METHOD A model of tensor decomposition, which is a generalization of matrix-based analysis for higher dimensional analysis, is designed for differentiating multisensor time series of gait force between Parkinson's disease and healthy control cohorts. RESULTS Experimental results obtained from the tensor decomposition model using a PhysioNet database show several discriminating characteristics of the two cohorts, and the achievement of 100% sensitivity and 100% specificity under various cross validations. CONCLUSION Tensor decomposition is a useful method for the modeling and analysis of multisensor time series in patients with Parkinson's disease. SIGNIFICANCE Tensor-decomposition factors can be potentially used as physiological markers for Parkinson's disease, and effective features for machine learning that can provide early prediction of the disease progression.
Collapse
|
17
|
Pellegrino G, Hedrich T, Chowdhury RA, Hall JA, Dubeau F, Lina JM, Kobayashi E, Grova C. Clinical yield of magnetoencephalography distributed source imaging in epilepsy: A comparison with equivalent current dipole method. Hum Brain Mapp 2017; 39:218-231. [PMID: 29024165 DOI: 10.1002/hbm.23837] [Citation(s) in RCA: 41] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2017] [Revised: 08/25/2017] [Accepted: 09/25/2017] [Indexed: 01/03/2023] Open
Abstract
OBJECTIVE Source localization of interictal epileptic discharges (IEDs) is clinically useful in the presurgical workup of epilepsy patients. It is usually obtained by equivalent current dipole (ECD) which localizes a point source and is the only inverse solution approved by clinical guidelines. In contrast, magnetic source imaging using distributed methods (dMSI) provides maps of the location and the extent of the generators, but its yield has not been clinically validated. We systematically compared ECD versus dMSI performed using coherent Maximum Entropy on the Mean (cMEM), a method sensitive to the spatial extent of the generators. METHODS 340 source localizations of IEDs derived from 49 focal epilepsy patients with foci well-defined through intracranial EEG, MRI lesions, and surgery were analyzed. The comparison was based on the assessment of the sublobar concordance with the focus and of the distance between the source and the focus. RESULTS dMSI sublobar concordance was significantly higher than ECD (81% vs 69%, P < 0.001), especially for extratemporal lobe sources (dMSI = 84%; ECD = 67%, P < 0.001) and for seizure free patients (dMSI = 83%; ECD = 70%, P < 0.001). The median distance from the focus was 4.88 mm for ECD and 3.44 mm for dMSI (P < 0.001). ECD dipoles were often wrongly localized in deep brain regions. CONCLUSIONS dMSI using cMEM exhibited better accuracy. dMSI also offered the advantage of recovering more realistic maps of the generator, which could be exploited for neuronavigation aimed at targeting invasive EEG and surgical resection. Therefore, dMSI may be preferred to ECD in clinical practice. Hum Brain Mapp 39:218-231, 2018. © 2017 Wiley Periodicals, Inc.
Collapse
Affiliation(s)
- Giovanni Pellegrino
- Multimodal Functional Imaging Lab, Biomedical Engineering Department, McGill University, Montreal, Quebec, Canada.,Neurology and Neurosurgery Department, Montreal Neurological Institute, McGill University, Montreal, Quebec, Canada.,IRCCS Fondazione San Camillo Hospital, Venice, Italy
| | - Tanguy Hedrich
- Multimodal Functional Imaging Lab, Biomedical Engineering Department, McGill University, Montreal, Quebec, Canada
| | - Rasheda Arman Chowdhury
- Multimodal Functional Imaging Lab, Biomedical Engineering Department, McGill University, Montreal, Quebec, Canada
| | - Jeffery A Hall
- Neurology and Neurosurgery Department, Montreal Neurological Institute, McGill University, Montreal, Quebec, Canada
| | - Francois Dubeau
- Neurology and Neurosurgery Department, Montreal Neurological Institute, McGill University, Montreal, Quebec, Canada
| | - Jean-Marc Lina
- Departement de Génie Electrique, Ecole de Technologie Supérieure, Montreal, Quebec, Canada.,Centre De Recherches En Mathématiques, Montreal, Quebec, Canada.,Centre D'études Avancées En Médecine Du Sommeil, Centre De Recherche De L'hôpital Sacré-Coeur De Montréal, Montreal, Quebec, Canada
| | - Eliane Kobayashi
- Neurology and Neurosurgery Department, Montreal Neurological Institute, McGill University, Montreal, Quebec, Canada
| | - Christophe Grova
- Multimodal Functional Imaging Lab, Biomedical Engineering Department, McGill University, Montreal, Quebec, Canada.,Neurology and Neurosurgery Department, Montreal Neurological Institute, McGill University, Montreal, Quebec, Canada.,Centre De Recherches En Mathématiques, Montreal, Quebec, Canada.,Physics Department and PERFORM Centre, Concordia University, Montreal, Quebec, Canada
| |
Collapse
|
18
|
Caschera S, Petti M, Mattia D, Astolfi L. EEG source estimation accuracy in presence of simulated cortical lesions. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2017; 2017:544-547. [PMID: 29059930 DOI: 10.1109/embc.2017.8036882] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Methods to reconstruct the neuroelectrical activity in the brain source space can be used to improve the spatial resolution of scalp-recorded EEG and to estimate the locations of electrical sources in the brain. This procedure can improve the investigation of the functional organization of the human brain, exploiting the high temporal resolution of EEG to follow the temporal dynamics of information processing. As for today, the uncertainties about the effects of inhomogeneities due to brain lesions preclude the adoption of EEG functional mapping on patients with lesioned brain. The aim of this work is to quantify the accuracy of a distributed source localization method in recovering extended sources of activated cortex when cortical lesions of different dimensions are introduced in simulated data. For this purpose, EEG source-distributed activity estimated from real data was modified including silent lesion areas. Then, for each simulated lesion, forward and inverse calculations were carried out to localize the produced scalp activity and the reconstructed cortical activity. Finally, the error induced in the reconstruction by the presence of the lesion was computed and analyzed in relation to the number of electrodes and to the size of the simulated lesion. Results returned values of global error in the whole cortex and of error in the non-lesioned area which are strongly dependent on the number of recorded scalp sensors, as they increase when a lower spatial sampling is performed on the scalp (64 versus 32 EEG channels). For increasing spatial sampling frequencies, the accuracy of the source reconstruction improves and even the presence of small lesions induces significantly higher error levels with respect to the lesion-free condition.
Collapse
|
19
|
SISSY: An efficient and automatic algorithm for the analysis of EEG sources based on structured sparsity. Neuroimage 2017; 157:157-172. [PMID: 28576413 DOI: 10.1016/j.neuroimage.2017.05.046] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2016] [Revised: 04/26/2017] [Accepted: 05/20/2017] [Indexed: 11/20/2022] Open
Abstract
Over the past decades, a multitude of different brain source imaging algorithms have been developed to identify the neural generators underlying the surface electroencephalography measurements. While most of these techniques focus on determining the source positions, only a small number of recently developed algorithms provides an indication of the spatial extent of the distributed sources. In a recent comparison of brain source imaging approaches, the VB-SCCD algorithm has been shown to be one of the most promising algorithms among these methods. However, this technique suffers from several problems: it leads to amplitude-biased source estimates, it has difficulties in separating close sources, and it has a high computational complexity due to its implementation using second order cone programming. To overcome these problems, we propose to include an additional regularization term that imposes sparsity in the original source domain and to solve the resulting optimization problem using the alternating direction method of multipliers. Furthermore, we show that the algorithm yields more robust solutions by taking into account the temporal structure of the data. We also propose a new method to automatically threshold the estimated source distribution, which permits to delineate the active brain regions. The new algorithm, called Source Imaging based on Structured Sparsity (SISSY), is analyzed by means of realistic computer simulations and is validated on the clinical data of four patients.
Collapse
|
20
|
Complex patterns of spatially extended generators of epileptic activity: Comparison of source localization methods cMEM and 4-ExSo-MUSIC on high resolution EEG and MEG data. Neuroimage 2016; 143:175-195. [DOI: 10.1016/j.neuroimage.2016.08.044] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2016] [Revised: 08/18/2016] [Accepted: 08/20/2016] [Indexed: 11/23/2022] Open
|
21
|
Becker H, Albera L, Comon P, Gribonval R, Wendling F, Merlet I. Localization of Distributed EEG Sources in the Context of Epilepsy: A Simulation Study. Ing Rech Biomed 2016. [DOI: 10.1016/j.irbm.2016.04.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
|
22
|
Nguyen NAT, Yang HJ, Kim S. Hidden discriminative features extraction for supervised high-order time series modeling. Comput Biol Med 2016; 78:81-90. [PMID: 27665534 DOI: 10.1016/j.compbiomed.2016.08.018] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2016] [Revised: 08/24/2016] [Accepted: 08/25/2016] [Indexed: 10/21/2022]
Abstract
In this paper, an orthogonal Tucker-decomposition-based extraction of high-order discriminative subspaces from a tensor-based time series data structure is presented, named as Tensor Discriminative Feature Extraction (TDFE). TDFE relies on the employment of category information for the maximization of the between-class scatter and the minimization of the within-class scatter to extract optimal hidden discriminative feature subspaces that are simultaneously spanned by every modality for supervised tensor modeling. In this context, the proposed tensor-decomposition method provides the following benefits: i) reduces dimensionality while robustly mining the underlying discriminative features, ii) results in effective interpretable features that lead to an improved classification and visualization, and iii) reduces the processing time during the training stage and the filtering of the projection by solving the generalized eigenvalue issue at each alternation step. Two real third-order tensor-structures of time series datasets (an epilepsy electroencephalogram (EEG) that is modeled as channel×frequency bin×time frame and a microarray data that is modeled as gene×sample×time) were used for the evaluation of the TDFE. The experiment results corroborate the advantages of the proposed method with averages of 98.26% and 89.63% for the classification accuracies of the epilepsy dataset and the microarray dataset, respectively. These performance averages represent an improvement on those of the matrix-based algorithms and recent tensor-based, discriminant-decomposition approaches; this is especially the case considering the small number of samples that are used in practice.
Collapse
Affiliation(s)
- Ngoc Anh Thi Nguyen
- Department of Computer Science, Chonnam National University, Gwangju 500-757, South Korea; Faculty of Information Technology, University of Education, The University of Danang, VietNam.
| | - Hyung-Jeong Yang
- Department of Computer Science, Chonnam National University, Gwangju 500-757, South Korea.
| | - Sunhee Kim
- Department of Brain and Cognitive Engineering, Korea University, Seoul 136-713, South Korea.
| |
Collapse
|
23
|
Hassan M, Merlet I, Mheich A, Kabbara A, Biraben A, Nica A, Wendling F. Identification of Interictal Epileptic Networks from Dense-EEG. Brain Topogr 2016; 30:60-76. [PMID: 27549639 DOI: 10.1007/s10548-016-0517-z] [Citation(s) in RCA: 59] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2016] [Accepted: 08/16/2016] [Indexed: 01/09/2023]
Abstract
Epilepsy is a network disease. The epileptic network usually involves spatially distributed brain regions. In this context, noninvasive M/EEG source connectivity is an emerging technique to identify functional brain networks at cortical level from noninvasive recordings. In this paper, we analyze the effect of the two key factors involved in EEG source connectivity processing: (i) the algorithm used in the solution of the EEG inverse problem and (ii) the method used in the estimation of the functional connectivity. We evaluate four inverse solutions algorithms (dSPM, wMNE, sLORETA and cMEM) and four connectivity measures (r 2, h 2, PLV, and MI) on data simulated from a combined biophysical/physiological model to generate realistic interictal epileptic spikes reflected in scalp EEG. We use a new network-based similarity index to compare between the network identified by each of the inverse/connectivity combination and the original network generated in the model. The method will be also applied on real data recorded from one epileptic patient who underwent a full presurgical evaluation for drug-resistant focal epilepsy. In simulated data, results revealed that the selection of the inverse/connectivity combination has a significant impact on the identified networks. Results suggested that nonlinear methods (nonlinear correlation coefficient, phase synchronization and mutual information) for measuring the connectivity are more efficient than the linear one (the cross correlation coefficient). The wMNE inverse solution showed higher performance than dSPM, cMEM and sLORETA. In real data, the combination (wMNE/PLV) led to a very good matching between the interictal epileptic network identified from noninvasive EEG recordings and the network obtained from connectivity analysis of intracerebral EEG recordings. These results suggest that source connectivity method, when appropriately configured, is able to extract highly relevant diagnostic information about networks involved in interictal epileptic spikes from non-invasive dense-EEG data.
Collapse
Affiliation(s)
- Mahmoud Hassan
- INSERM, U1099, Rennes, 35000, France.
- LTSI, Université de Rennes 1, Rennes, 35000, France.
| | - Isabelle Merlet
- INSERM, U1099, Rennes, 35000, France
- LTSI, Université de Rennes 1, Rennes, 35000, France
| | - Ahmad Mheich
- INSERM, U1099, Rennes, 35000, France
- LTSI, Université de Rennes 1, Rennes, 35000, France
- AZM Center-EDST, Lebanese University, Tripoli, Lebanon
| | - Aya Kabbara
- INSERM, U1099, Rennes, 35000, France
- LTSI, Université de Rennes 1, Rennes, 35000, France
- AZM Center-EDST, Lebanese University, Tripoli, Lebanon
| | - Arnaud Biraben
- INSERM, U1099, Rennes, 35000, France
- LTSI, Université de Rennes 1, Rennes, 35000, France
- Neurology Department, CHU, Rennes, 35000, France
| | - Anca Nica
- Neurology Department, CHU, Rennes, 35000, France
| | - Fabrice Wendling
- INSERM, U1099, Rennes, 35000, France
- LTSI, Université de Rennes 1, Rennes, 35000, France
| |
Collapse
|
24
|
Bradley A, Yao J, Dewald J, Richter CP. Evaluation of Electroencephalography Source Localization Algorithms with Multiple Cortical Sources. PLoS One 2016; 11:e0147266. [PMID: 26809000 PMCID: PMC4725774 DOI: 10.1371/journal.pone.0147266] [Citation(s) in RCA: 46] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2014] [Accepted: 12/31/2015] [Indexed: 11/30/2022] Open
Abstract
BACKGROUND Source localization algorithms often show multiple active cortical areas as the source of electroencephalography (EEG). Yet, there is little data quantifying the accuracy of these results. In this paper, the performance of current source density source localization algorithms for the detection of multiple cortical sources of EEG data has been characterized. METHODS EEG data were generated by simulating multiple cortical sources (2-4) with the same strength or two sources with relative strength ratios of 1:1 to 4:1, and adding noise. These data were used to reconstruct the cortical sources using current source density (CSD) algorithms: sLORETA, MNLS, and LORETA using a p-norm with p equal to 1, 1.5 and 2. Precision (percentage of the reconstructed activity corresponding to simulated activity) and Recall (percentage of the simulated sources reconstructed) of each of the CSD algorithms were calculated. RESULTS While sLORETA has the best performance when only one source is present, when two or more sources are present LORETA with p equal to 1.5 performs better. When the relative strength of one of the sources is decreased, all algorithms have more difficulty reconstructing that source. However, LORETA 1.5 continues to outperform other algorithms. If only the strongest source is of interest sLORETA is recommended, while LORETA with p equal to 1.5 is recommended if two or more of the cortical sources are of interest. These results provide guidance for choosing a CSD algorithm to locate multiple cortical sources of EEG and for interpreting the results of these algorithms.
Collapse
Affiliation(s)
- Allison Bradley
- Department of Biomedical Engineering, Northwestern University, Evanston, IL, United States of America
- Department of Otolaryngology, Feinberg School of Medicine, Northwestern University, Chicago, IL, United States of America
| | - Jun Yao
- Department of Physical Therapy and Human Movement Science, Feinberg School of Medicine, Northwestern University, Chicago, IL, United States of America
| | - Jules Dewald
- Department of Biomedical Engineering, Northwestern University, Evanston, IL, United States of America
- Department of Physical Therapy and Human Movement Science, Feinberg School of Medicine, Northwestern University, Chicago, IL, United States of America
- Department of Physical Medicine and Rehabilitation, Northwestern University, Chicago, IL, United States of America
| | - Claus-Peter Richter
- Department of Biomedical Engineering, Northwestern University, Evanston, IL, United States of America
- Department of Otolaryngology, Feinberg School of Medicine, Northwestern University, Chicago, IL, United States of America
- Hugh Knowles Center, Department of Communication Sciences and Disorders, Northwestern University, Evanston, IL, United States of America
| |
Collapse
|
25
|
Strobbe G, Carrette E, López JD, Montes Restrepo V, Van Roost D, Meurs A, Vonck K, Boon P, Vandenberghe S, van Mierlo P. Electrical source imaging of interictal spikes using multiple sparse volumetric priors for presurgical epileptogenic focus localization. NEUROIMAGE-CLINICAL 2016; 11:252-263. [PMID: 26958464 PMCID: PMC4773507 DOI: 10.1016/j.nicl.2016.01.017] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/09/2015] [Revised: 10/09/2015] [Accepted: 01/17/2016] [Indexed: 11/07/2022]
Abstract
Electrical source imaging of interictal spikes observed in EEG recordings of patients with refractory epilepsy provides useful information to localize the epileptogenic focus during the presurgical evaluation. However, the selection of the time points or time epochs of the spikes in order to estimate the origin of the activity remains a challenge. In this study, we consider a Bayesian EEG source imaging technique for distributed sources, i.e. the multiple volumetric sparse priors (MSVP) approach. The approach allows to estimate the time courses of the intensity of the sources corresponding with a specific time epoch of the spike. Based on presurgical averaged interictal spikes in six patients who were successfully treated with surgery, we estimated the time courses of the source intensities for three different time epochs: (i) an epoch starting 50 ms before the spike peak and ending at 50% of the spike peak during the rising phase of the spike, (ii) an epoch starting 50 ms before the spike peak and ending at the spike peak and (iii) an epoch containing the full spike time period starting 50 ms before the spike peak and ending 230 ms after the spike peak. To identify the primary source of the spike activity, the source with the maximum energy from 50 ms before the spike peak till 50% of the spike peak was subsequently selected for each of the time windows. For comparison, the activity at the spike peaks and at 50% of the peaks was localized using the LORETA inversion technique and an ECD approach. Both patient-specific spherical forward models and patient-specific 5-layered finite difference models were considered to evaluate the influence of the forward model. Based on the resected zones in each of the patients, extracted from post-operative MR images, we compared the distances to the resection border of the estimated activity. Using the spherical models, the distances to the resection border for the MSVP approach and each of the different time epochs were in the same range as the LORETA and ECD techniques. We found distances smaller than 23 mm, with robust results for all the patients. For the finite difference models, we found that the distances to the resection border for the MSVP inversions of the full spike time epochs were generally smaller compared to the MSVP inversions of the time epochs before the spike peak. The results also suggest that the inversions using the finite difference models resulted in slightly smaller distances to the resection border compared to the spherical models. The results we obtained are promising because the MSVP approach allows to study the network of the estimated source-intensities and allows to characterize the spatial extent of the underlying sources. A Bayesian ESI technique is evaluated to localize interictal spike activity. Averaged spikes in six patients were used that were seizure free after surgery. We compared the technique with the LORETA an ECD technique. We evaluated both spherical and 5-layered finite difference forward models. Our approach is potentially useful to delineate the irritative zone.
Collapse
Affiliation(s)
- Gregor Strobbe
- Ghent University, Department of Electronics and Information Systems, MEDISIP, De Pintelaan 185, Building BB Floor 5, 9000 Ghent, Belgium; iMinds Medical IT Department, Belgium.
| | - Evelien Carrette
- Laboratory for Clinical and Experimental Neurophysiology, Ghent University Hospital, Ghent, Belgium.
| | - José David López
- SISTEMIC, Department of Electronic Engineering, Universidad de Antioquia UDEA, Calle 70 No. 52-21,Medellín, Colombia.
| | - Victoria Montes Restrepo
- Ghent University, Department of Electronics and Information Systems, MEDISIP, De Pintelaan 185, Building BB Floor 5, 9000 Ghent, Belgium; iMinds Medical IT Department, Belgium
| | - Dirk Van Roost
- Department of Neurosurgery, Ghent University Hospital, Ghent, Belgium.
| | - Alfred Meurs
- Laboratory for Clinical and Experimental Neurophysiology, Ghent University Hospital, Ghent, Belgium.
| | - Kristl Vonck
- Laboratory for Clinical and Experimental Neurophysiology, Ghent University Hospital, Ghent, Belgium.
| | - Paul Boon
- Laboratory for Clinical and Experimental Neurophysiology, Ghent University Hospital, Ghent, Belgium.
| | - Stefaan Vandenberghe
- Ghent University, Department of Electronics and Information Systems, MEDISIP, De Pintelaan 185, Building BB Floor 5, 9000 Ghent, Belgium; iMinds Medical IT Department, Belgium.
| | - Pieter van Mierlo
- Ghent University, Department of Electronics and Information Systems, MEDISIP, De Pintelaan 185, Building BB Floor 5, 9000 Ghent, Belgium; iMinds Medical IT Department, Belgium.
| |
Collapse
|
26
|
Ribeiro LN, Hidalgo-Muñoz AR, Zarzoso V. Atrial signal extraction in atrial fibrillation electrocardiograms using a tensor decomposition approach. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2016; 2015:6987-90. [PMID: 26737900 DOI: 10.1109/embc.2015.7320000] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
Atrial fibrillation (AF) is the most common cardiac arrhythmia encountered in clinical practice and remains a major challenge in cardiology. The noninvasive analysis of AF usually requires the estimation of the atrial activity (AA) signal in surface electrocardiogram (ECG) recordings. The present contribution puts forward a tensor decomposition approach for noninvasive AA extraction in AF ECG recordings. As opposed to the matrix approach, tensor decompositions are generally unique under mild conditions and have the potential to perform source separation in scenarios with a limited number of electrodes. An experimental study on a synthethic signal model and a real AF ECG recording evaluates the performance of the so-called block term tensor decomposition approach as compared to matrix techniques such as principal component analysis and independent component analysis.
Collapse
|
27
|
Albera L, Becker H, Karfoul A, Gribonval R, Kachenoura A, Bensaid S, Senhadji L, Hernandez A, Merlet I. Localization of spatially distributed brain sources after a tensor-based preprocessing of interictal epileptic EEG data. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2016; 2015:6995-8. [PMID: 26737902 DOI: 10.1109/embc.2015.7320002] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
This paper addresses the localization of spatially distributed sources from interictal epileptic electroencephalographic data after a tensor-based preprocessing. Justifying the Canonical Polyadic (CP) model of the space-time-frequency and space-time-wave-vector tensors is not an easy task when two or more extended sources have to be localized. On the other hand, the occurrence of several amplitude modulated spikes originating from the same epileptic region can be used to build a space-time-spike tensor from the EEG data. While the CP model of this tensor appears more justified, the exact computation of its loading matrices can be limited by the presence of highly correlated sources or/and a strong background noise. An efficient extended source localization scheme after the tensor-based preprocessing has then to be set up. Different strategies are thus investigated and compared on realistic simulated data: the "disk algorithm" using a precomputed dictionary of circular patches, a standardized Tikhonov regularization and a fused LASSO scheme.
Collapse
|
28
|
|
29
|
EEGNET: An Open Source Tool for Analyzing and Visualizing M/EEG Connectome. PLoS One 2015; 10:e0138297. [PMID: 26379232 PMCID: PMC4574940 DOI: 10.1371/journal.pone.0138297] [Citation(s) in RCA: 47] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2015] [Accepted: 08/29/2015] [Indexed: 11/19/2022] Open
Abstract
The brain is a large-scale complex network often referred to as the “connectome”. Exploring the dynamic behavior of the connectome is a challenging issue as both excellent time and space resolution is required. In this context Magneto/Electroencephalography (M/EEG) are effective neuroimaging techniques allowing for analysis of the dynamics of functional brain networks at scalp level and/or at reconstructed sources. However, a tool that can cover all the processing steps of identifying brain networks from M/EEG data is still missing. In this paper, we report a novel software package, called EEGNET, running under MATLAB (Math works, inc), and allowing for analysis and visualization of functional brain networks from M/EEG recordings. EEGNET is developed to analyze networks either at the level of scalp electrodes or at the level of reconstructed cortical sources. It includes i) Basic steps in preprocessing M/EEG signals, ii) the solution of the inverse problem to localize / reconstruct the cortical sources, iii) the computation of functional connectivity among signals collected at surface electrodes or/and time courses of reconstructed sources and iv) the computation of the network measures based on graph theory analysis. EEGNET is the unique tool that combines the M/EEG functional connectivity analysis and the computation of network measures derived from the graph theory. The first version of EEGNET is easy to use, flexible and user friendly. EEGNET is an open source tool and can be freely downloaded from this webpage: https://sites.google.com/site/eegnetworks/.
Collapse
|
30
|
Cong F, Lin QH, Kuang LD, Gong XF, Astikainen P, Ristaniemi T. Tensor decomposition of EEG signals: A brief review. J Neurosci Methods 2015; 248:59-69. [DOI: 10.1016/j.jneumeth.2015.03.018] [Citation(s) in RCA: 107] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2014] [Revised: 02/17/2015] [Accepted: 03/12/2015] [Indexed: 10/23/2022]
|
31
|
Localization Accuracy of Distributed Inverse Solutions for Electric and Magnetic Source Imaging of Interictal Epileptic Discharges in Patients with Focal Epilepsy. Brain Topogr 2015; 29:162-81. [DOI: 10.1007/s10548-014-0423-1] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2014] [Accepted: 12/24/2014] [Indexed: 10/24/2022]
|
32
|
Dynamic Behavior of Uterine Contractions: An Approach Based on Source Localization and Multiscale Modeling. ACTA ACUST UNITED AC 2015. [DOI: 10.1007/978-3-319-11680-8_42] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/21/2023]
|