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Olejarczyk E, Gotman J, Frauscher B. Region-specific complexity of the intracranial EEG in the sleeping human brain. Sci Rep 2022; 12:451. [PMID: 35013431 PMCID: PMC8748934 DOI: 10.1038/s41598-021-04213-8] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2021] [Accepted: 12/13/2021] [Indexed: 11/18/2022] Open
Abstract
As the brain is a complex system with occurrence of self-similarity at different levels, a dedicated analysis of the complexity of brain signals is of interest to elucidate the functional role of various brain regions across the various stages of vigilance. We exploited intracranial electroencephalogram data from 38 cortical regions using the Higuchi fractal dimension (HFD) as measure to assess brain complexity, on a dataset of 1772 electrode locations. HFD values depended on sleep stage and topography. HFD increased with higher levels of vigilance, being highest during wakefulness in the frontal lobe. HFD did not change from wake to stage N2 in temporo-occipital regions. The transverse temporal gyrus was the only area in which the HFD did not differ between any two vigilance stages. Interestingly, HFD of wakefulness and stage R were different mainly in the precentral gyrus, possibly reflecting motor inhibition in stage R. The fusiform and parahippocampal gyri were the only areas showing no difference between wakefulness and N2. Stages R and N2 were similar only for the postcentral gyrus. Topographical analysis of brain complexity revealed that sleep stages are clearly differentiated in fronto-central brain regions, but that temporo-occipital regions sleep differently.
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Affiliation(s)
- Elzbieta Olejarczyk
- Nalecz Institute of Biocybernetics and Biomedical Engineering, Polish Academy of Sciences, Trojdena 4 Str., 02-109, Warsaw, Poland.
| | - Jean Gotman
- Montreal Neurological Institute and Hospital, McGill University, Montreal, QC, H3A 2B4, Canada
| | - Birgit Frauscher
- Montreal Neurological Institute and Hospital, McGill University, Montreal, QC, H3A 2B4, Canada
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Ellenrieder N, Gotman J, Zelmann R, Rogers C, Nguyen DK, Kahane P, Dubeau F, Frauscher B. How the Human Brain Sleeps: Direct Cortical Recordings of Normal Brain Activity. Ann Neurol 2019; 87:289-301. [DOI: 10.1002/ana.25651] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2019] [Revised: 10/29/2019] [Accepted: 11/24/2019] [Indexed: 01/25/2023]
Affiliation(s)
- Nicolás Ellenrieder
- Montreal Neurological Institute and HospitalMcGill University Montreal Quebec Canada
| | - Jean Gotman
- Montreal Neurological Institute and HospitalMcGill University Montreal Quebec Canada
| | - Rina Zelmann
- Montreal Neurological Institute and HospitalMcGill University Montreal Quebec Canada
- Department of NeurologyMassachusetts General Hospital and Harvard Medical School Boston MA
| | - Christine Rogers
- Montreal Neurological Institute and HospitalMcGill University Montreal Quebec Canada
| | | | - Philippe Kahane
- Department of NeurologyGrenoble‐Alpes University Hospital and Grenoble‐Alpes University Grenoble France
| | - François Dubeau
- Montreal Neurological Institute and HospitalMcGill University Montreal Quebec Canada
| | - Birgit Frauscher
- Montreal Neurological Institute and HospitalMcGill University Montreal Quebec Canada
- Department of MedicineQueen's University Kingston Ontario Canada
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Hyde DE, Peters J, Warfield SK. Multi-Resolution Graph Based Volumetric Cortical Basis Functions From Local Anatomic Features. IEEE Trans Biomed Eng 2019; 66:3381-3392. [PMID: 30872218 PMCID: PMC6995658 DOI: 10.1109/tbme.2019.2904473] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
OBJECTIVE Modern clinical MRI collects millimeter scale anatomic information, but scalp electroencephalography source localization is ill posed, and cannot resolve individual sources at that resolution. Dimensionality reduction in the space of cortical sources is needed to improve computational and storage complexity, yet volumetric methods still employ simplistic grid coarsening that eliminates fine scale anatomic structure. We present an approach to extend near-arbitrary spatial scaling to volumetric localization. METHODS Starting from a voxelwise brain parcellation, sub-parcels are identified from local cortical connectivity with an iterated graph cut approach. Spatial basis functions in each parcel are constructed using either a decomposition of the local leadfield matrix or spectral basis functions of local cortical connectivity graphs. RESULTS We present quantitative evaluation with extensive simulations and use multiple sets of real data to highlight how parameter changes impact computed reconstructions. Our results show that volumetric basis functions can improve accuracy by as much as 30%, while reducing computational complexity by over two orders of magnitude. In real data from epilepsy surgical candidates, accurate localization of seizure onset regions is demonstrated. CONCLUSION Spatial dimensionality reduction with volumetric basis functions improves reconstruction accuracy while reducing computational complexity. SIGNIFICANCE Near-arbitrary spatial dimensionality reduction will enable volumetric reconstruction with modern computationally intensive algorithms and anatomically driven multi-resolution methods.
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Geva-Sagiv M, Nir Y. Local Sleep Oscillations: Implications for Memory Consolidation. Front Neurosci 2019; 13:813. [PMID: 31481865 PMCID: PMC6710395 DOI: 10.3389/fnins.2019.00813] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2019] [Accepted: 07/22/2019] [Indexed: 12/18/2022] Open
Affiliation(s)
- Maya Geva-Sagiv
- Department of Neurosurgery, University of California, Los Angeles, Los Angeles, CA, United States
- Sagol School of Neuroscience, Tel Aviv University, Tel Aviv, Israel
| | - Yuval Nir
- Sagol School of Neuroscience, Tel Aviv University, Tel Aviv, Israel
- Department of Physiology and Pharmacology, Sackler School of Medicine, Tel Aviv University, Tel Aviv, Israel
- Functional Neurophysiology and Sleep Research Lab, Tel-Aviv Sourasky Medical Center, Tel Aviv, Israel
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Bénar CG, Grova C, Jirsa VK, Lina JM. Differences in MEG and EEG power-law scaling explained by a coupling between spatial coherence and frequency: a simulation study. J Comput Neurosci 2019; 47:31-41. [PMID: 31292816 DOI: 10.1007/s10827-019-00721-9] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2018] [Revised: 06/11/2019] [Accepted: 06/26/2019] [Indexed: 01/12/2023]
Abstract
Electrophysiological signals (electroencephalography, EEG, and magnetoencephalography, MEG), as many natural processes, exhibit scale-invariance properties resulting in a power-law (1/f) spectrum. Interestingly, EEG and MEG differ in their slopes, which could be explained by several mechanisms, including non-resistive properties of tissues. Our goal in the present study is to estimate the impact of space/frequency structure of source signals as a putative mechanism to explain spectral scaling properties of neuroimaging signals. We performed simulations based on the summed contribution of cortical patches with different sizes (ranging from 0.4 to 104.2 cm2). Small patches were attributed signals of high frequencies, whereas large patches were associated with signals of low frequencies, on a logarithmic scale. The tested parameters included i) the space/frequency structure (range of patch sizes and frequencies) and ii) the amplitude factor c parametrizing the spatial scale ratios. We found that the space/frequency structure may cause differences between EEG and MEG scale-free spectra that are compatible with real data findings reported in previous studies. We also found that below a certain spatial scale, there were no more differences between EEG and MEG, suggesting a limit for the resolution of both methods.Our work provides an explanation of experimental findings. This does not rule out other mechanisms for differences between EEG and MEG, but suggests an important role of spatio-temporal structure of neural dynamics. This can help the analysis and interpretation of power-law measures in EEG and MEG, and we believe our results can also impact computational modeling of brain dynamics, where different local connectivity structures could be used at different frequencies.
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Affiliation(s)
- C G Bénar
- Aix Marseille Univ, INSERM, INS, Inst Neurosci Syst, Marseille, France.
| | - C Grova
- PERFORM Centre and Physics Department, Concordia University, Montreal, QC, Canada.,Montreal Neurological Institute and Hospital, McGill University, Montreal, QC, Canada.,Multimodal Functional Imaging Laboratory, Biomedical Engineering Department, McGill University, Montreal, QC, Canada.,Centre de Recherches Mathématiques, Montreal, QC, Canada
| | - V K Jirsa
- Aix Marseille Univ, INSERM, INS, Inst Neurosci Syst, Marseille, France
| | - J M Lina
- Centre de Recherches Mathématiques, Montreal, QC, Canada.,Département de Génie Électrique, École de Technologie Supérieure, Montreal, QC, Canada.,Centre d'Etudes Avancées en Médecine du Sommeil, Hôpital Sacré Cœur, Montreal, QC, Canada
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In search of epileptic scalp high-frequency oscillations. Clin Neurophysiol 2019; 130:1172-1174. [PMID: 31064718 DOI: 10.1016/j.clinph.2019.04.006] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2019] [Accepted: 04/11/2019] [Indexed: 11/20/2022]
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Gotman J. Oh surprise! Fast ripples on scalp EEG. Clin Neurophysiol 2018; 129:1449-1450. [PMID: 29753620 DOI: 10.1016/j.clinph.2018.04.612] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2018] [Accepted: 04/18/2018] [Indexed: 11/16/2022]
Affiliation(s)
- Jean Gotman
- Montreal Neurological Institute, McGill University, Montréal, Québec, Canada.
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Bernardo D, Nariai H, Hussain SA, Sankar R, Salamon N, Krueger DA, Sahin M, Northrup H, Bebin EM, Wu JY. Visual and semi-automatic non-invasive detection of interictal fast ripples: A potential biomarker of epilepsy in children with tuberous sclerosis complex. Clin Neurophysiol 2018; 129:1458-1466. [PMID: 29673547 DOI: 10.1016/j.clinph.2018.03.010] [Citation(s) in RCA: 44] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2017] [Revised: 02/22/2018] [Accepted: 03/07/2018] [Indexed: 11/15/2022]
Abstract
OBJECTIVES We aim to establish that interictal fast ripples (FR; 250-500 Hz) are detectable on scalp EEG, and to investigate their association to epilepsy. METHODS Scalp EEG recordings of a subset of children with tuberous sclerosis complex (TSC)-associated epilepsy from two large multicenter observational TSC studies were analyzed and compared to control children without epilepsy or any other brain-based diagnoses. FR were identified both by human visual review and compared with semi-automated review utilizing a deep learning-based FR detector. RESULTS Seven out of 7 children with TSC-associated epilepsy had scalp FR compared to 0 out of 4 children in the control group (p = 0.003). The automatic detector has a sensitivity of 98% and false positive rate with average of 11.2 false positives per minute. CONCLUSIONS Non-invasive detection of interictal scalp FR was feasible, by both visual and semi-automatic detection. Interictal scalp FR occurred exclusively in children with TSC-associated epilepsy and were absent in controls without epilepsy. The proposed detector achieves high sensitivity of FR detection; however, expert review of the results to reduce false positives is advised. SIGNIFICANCE Interictal FR are detectable on scalp EEG and may potentially serve as a biomarker of epilepsy in children with TSC.
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Affiliation(s)
- Danilo Bernardo
- Division of Pediatric Neurology, Department of Pediatrics, UCLA Mattel Children's Hospital, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA.
| | - Hiroki Nariai
- Division of Pediatric Neurology, Department of Pediatrics, UCLA Mattel Children's Hospital, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA
| | - Shaun A Hussain
- Division of Pediatric Neurology, Department of Pediatrics, UCLA Mattel Children's Hospital, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA
| | - Raman Sankar
- Division of Pediatric Neurology, Department of Pediatrics, UCLA Mattel Children's Hospital, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA
| | - Noriko Salamon
- Division of Neuroradiology, Department of Radiology, Ronald Reagan UCLA Medical Center, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA
| | - Darcy A Krueger
- Division of Neurology, Department of Pediatrics, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA
| | - Mustafa Sahin
- Department of Neurology, Boston Children's Hospital, Harvard Medical School, Boston, MA, USA
| | - Hope Northrup
- Division of Medical Genetics, Department of Pediatrics, McGovern Medical School, University of Texas Health Science Center at Houston, Houston, TX, USA
| | - E Martina Bebin
- Department of Neurology, University of Alabama at Birmingham, Birmingham, AL, USA
| | - Joyce Y Wu
- Division of Pediatric Neurology, Department of Pediatrics, UCLA Mattel Children's Hospital, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA
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