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Bai W, Yamashita O, Yoshimoto J. Functionally specialized spectral organization of the resting human cortex. Neural Netw 2025; 185:107195. [PMID: 39893804 DOI: 10.1016/j.neunet.2025.107195] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2024] [Accepted: 01/16/2025] [Indexed: 02/04/2025]
Abstract
Ample studies across various neuroimaging modalities have suggested that the human cortex at rest is hierarchically organized along the spectral and functional axes. However, the relationship between the spectral and functional organizations of the human cortex remains largely unexplored. Here, we reveal the confluence of functional and spectral cortical organizations by examining the functional specialization in spectral gradients of the cortex. These spectral gradients, derived from functional magnetic resonance imaging data at rest using our temporal de-correlation method to enhance spectral resolution, demonstrate regional frequency biases. The grading of spectral gradients across the cortex - aligns with many existing brain maps - is found to be highly functionally specialized through discovered frequency-specific resting-state functional networks, functionally distinctive spectral profiles, and an intrinsic coordinate system that is functionally specialized. By demonstrating the functionally specialized spectral gradients of the cortex, we shed light on the close relation between functional and spectral organizations of the resting human cortex.
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Affiliation(s)
- Wenjun Bai
- Department of Computational Brain Imaging Advanced Telecommunication Research Institute International (ATR), Kyoto, Japan.
| | - Okito Yamashita
- Department of Computational Brain Imaging Advanced Telecommunication Research Institute International (ATR), Kyoto, Japan; Center for Advanced Intelligence Project, RIKEN, Tokyo, Japan
| | - Junichiro Yoshimoto
- Department of Computational Brain Imaging Advanced Telecommunication Research Institute International (ATR), Kyoto, Japan; Department of Biomedical Data Science, School of Medicine, Fujita Health University, Japan; International Center for Brain Science, Fujita Health University, Aichi, Japan
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2
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Sun J, Shen A, Sun Y, Chen X, Li Y, Gao X, Lu B. Adaptive spatiotemporal encoding network for cognitive assessment using resting state EEG. NPJ Digit Med 2024; 7:375. [PMID: 39715883 DOI: 10.1038/s41746-024-01384-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2024] [Accepted: 12/09/2024] [Indexed: 12/25/2024] Open
Abstract
Cognitive impairment, marked by neurodegenerative damage, leads to diminished cognitive function decline. Accurate cognitive assessment is crucial for early detection and progress evaluation, yet current methods in clinical practice lack objectivity, precision, and convenience. This study included 743 participants, including healthy individuals, mild cognitive impairment (MCI), and dementia patients, with collected resting-state EEG data and cognitive scale scores. An adaptive spatiotemporal encoding framework was developed based on resting-state EEG, achieving an MAE of 3.12% (95% CI: 2.9034, 3.3975) in testing (sensitivity: 0.97, 95% CI: 0.779,1; specificity: 0.97, 95% CI: 0.779,1). The model's effectiveness was also validated on the neurofeedback (sensitivity: 0.867, 95% CI: 0.621, 0.963; specificity: 1, 95% CI: 0.439, 1.0) and TMS datasets (sensitivity: 0.833, 95% CI: 0.608, 0.942), which effectively reflect the participants' cognitive changes. The model effectively extracted repetitive spatiotemporal patterns from resting-state EEG, aiding in cognitive disease diagnosis and assessment in various scenarios.
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Affiliation(s)
- Jingnan Sun
- Department of Biomedical Engineering, Tsinghua University, 100084, Beijing, China
- IDG/McGovern Institute for Brain Research, Tsinghua University, 100084, Beijing, China
| | - Anruo Shen
- Department of Biomedical Engineering, Tsinghua University, 100084, Beijing, China
- IDG/McGovern Institute for Brain Research, Tsinghua University, 100084, Beijing, China
| | - Yike Sun
- Department of Biomedical Engineering, Tsinghua University, 100084, Beijing, China
- IDG/McGovern Institute for Brain Research, Tsinghua University, 100084, Beijing, China
| | - Xiaogang Chen
- Institute of Biomedical Engineering, Chinese Academy of MedicalSciences and Peking Union Medical College, Tianjin, 300192, China
| | - Yunxia Li
- Department of Neurology, Shanghai Pudong Hospital, Fudan University Pudong Medical Center, 2800 Gongwei Road, 201339, Shanghai, China.
- Shanghai Key Laboratory of Vascular Lesions Regulation and Remodeling, 200120, Shanghai, China.
- Department of Neurology, Tongji Hospital, School of Medicine, Tongji University, 200092, Shanghai, China.
| | - Xiaorong Gao
- Department of Biomedical Engineering, Tsinghua University, 100084, Beijing, China.
- IDG/McGovern Institute for Brain Research, Tsinghua University, 100084, Beijing, China.
| | - Bai Lu
- IDG/McGovern Institute for Brain Research, Tsinghua University, 100084, Beijing, China.
- School of Pharmaceutical Sciences, Tsinghua University, 100084, Beijing, China.
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Foster M, Scheinost D. Brain states as wave-like motifs. Trends Cogn Sci 2024; 28:492-503. [PMID: 38582654 DOI: 10.1016/j.tics.2024.03.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2023] [Revised: 02/29/2024] [Accepted: 03/11/2024] [Indexed: 04/08/2024]
Abstract
There is ample evidence of wave-like activity in the brain at multiple scales and levels. This emerging literature supports the broader adoption of a wave perspective of brain activity. Specifically, a brain state can be described as a set of recurring, sequential patterns of propagating brain activity, namely a wave. We examine a collective body of experimental work investigating wave-like properties. Based on these works, we consider brain states as waves using a scale-agnostic framework across time and space. Emphasis is placed on the sequentiality and periodicity associated with brain activity. We conclude by discussing the implications, prospects, and experimental opportunities of this framework.
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Affiliation(s)
- Maya Foster
- Department of Biomedical Engineering, Yale University, New Haven, CT, USA.
| | - Dustin Scheinost
- Department of Biomedical Engineering, Yale University, New Haven, CT, USA; Department of Radiology and Biomedical Engineering, Yale School of Medicine, New Haven, CT, USA
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Li S, Cheng S, Shangguan C, Su X, Li X. Forgive or complain: Interpersonal distance modulates reactive attitudes and neural responses toward wrongdoers. Biol Psychol 2023; 183:108653. [PMID: 37536652 DOI: 10.1016/j.biopsycho.2023.108653] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2023] [Revised: 07/23/2023] [Accepted: 07/31/2023] [Indexed: 08/05/2023]
Abstract
While the effect of interpersonal distance on forgiveness has been investigated over the past few years, it remains unclear whether this facilitating effect holds even when measured implicitly. Meanwhile, though cognitive control and the corresponding prefrontal cortex play a prominent role in forgiveness processing, the neural mechanism underlying forgiveness toward varied wrongdoers is largely unexplored. Here, forty-two participants initially underwent noise offense either from their friend or stranger, followed by a word identification test to examine their implicit attitude, during which they were presented with word-name combinations and required to categorize forgive- or complain-label words while ignoring the names of their friends or strangers below. A shorter reaction time reflects more congruence with one's implicit attitude. Electroencephalogram was recorded during the word identification test. Behaviorally, while individuals reacted faster to forgive-friend relative to complain-friend pairings, no such reaction bias was found for the stranger-wrongdoer, which suggests that individuals were more inclined to forgive someone close. Regarding the EEG/ERP results, forgive-friend elicited lower alpha oscillation and more negative frontal alpha asymmetry (FAA) value than complain-friend combinations, suggesting increased and dominant activity in the right prefrontal network during forgiveness toward friends. Whereas complain- relative to forgive-stranger combinations elicited larger P3 amplitudes, suggesting a neural encoding bias to information associated with complaints about stranger-wrongdoer. These multimodal findings provide evidence for the benefits of closeness in forgiveness and shed light on the neural mechanisms underlying forgiveness toward different types of wrongdoers.
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Affiliation(s)
- Sijin Li
- School of Psychology, Shenzhen University, Shenzhen 518060, China
| | - Si Cheng
- School of Psychology, Shenzhen University, Shenzhen 518060, China
| | - Chenyu Shangguan
- College of Education Science and Technology, Nanjing University of Posts and Telecommunications, Nanjing 210023, China
| | - Xianling Su
- College of Education, Shanghai Normal University, Shanghai 200234, China
| | - Xu Li
- College of Education, Shanghai Normal University, Shanghai 200234, China.
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Bolt T, Nomi JS, Bzdok D, Salas JA, Chang C, Thomas Yeo BT, Uddin LQ, Keilholz SD. A parsimonious description of global functional brain organization in three spatiotemporal patterns. Nat Neurosci 2022; 25:1093-1103. [PMID: 35902649 DOI: 10.1038/s41593-022-01118-1] [Citation(s) in RCA: 71] [Impact Index Per Article: 23.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2021] [Accepted: 06/13/2022] [Indexed: 12/15/2022]
Abstract
Resting-state functional magnetic resonance imaging (MRI) has yielded seemingly disparate insights into large-scale organization of the human brain. The brain's large-scale organization can be divided into two broad categories: zero-lag representations of functional connectivity structure and time-lag representations of traveling wave or propagation structure. In this study, we sought to unify observed phenomena across these two categories in the form of three low-frequency spatiotemporal patterns composed of a mixture of standing and traveling wave dynamics. We showed that a range of empirical phenomena, including functional connectivity gradients, the task-positive/task-negative anti-correlation pattern, the global signal, time-lag propagation patterns, the quasiperiodic pattern and the functional connectome network structure, are manifestations of these three spatiotemporal patterns. These patterns account for much of the global spatial structure that underlies functional connectivity analyses and unifies phenomena in resting-state functional MRI previously thought distinct.
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Affiliation(s)
- Taylor Bolt
- Emory University/Georgia Institute of Technology, Atlanta, GA, USA. .,Department of Psychiatry and Biobehavioral Sciences, University of California, Los Angeles, Los Angeles, CA, USA.
| | - Jason S Nomi
- Department of Psychiatry and Biobehavioral Sciences, University of California, Los Angeles, Los Angeles, CA, USA
| | - Danilo Bzdok
- The Neuro (Montreal Neurological Institute), McGill University & Mila - Quebec Artificial Intelligence Institute, Montreal, QC, Canada
| | - Jorge A Salas
- Departments of Electrical and Computer Engineering, Computer Science, and Biomedical Engineering, Vanderbilt University, Nashville, TN, USA
| | - Catie Chang
- Departments of Electrical and Computer Engineering, Computer Science, and Biomedical Engineering, Vanderbilt University, Nashville, TN, USA
| | - B T Thomas Yeo
- Department of Electrical & Computer Engineering, Centre for Translational MR Research, Centre for Sleep & Cognition, N.1 Institute for Health and Institute for Digital Medicine, National University of Singapore, Singapore, Singapore
| | - Lucina Q Uddin
- Department of Psychiatry and Biobehavioral Sciences, University of California, Los Angeles, Los Angeles, CA, USA
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Khan AF, Zhang F, Shou G, Yuan H, Ding L. Transient brain-wide coactivations and structured transitions revealed in hemodynamic imaging data. Neuroimage 2022; 260:119460. [PMID: 35868615 PMCID: PMC9472706 DOI: 10.1016/j.neuroimage.2022.119460] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2021] [Revised: 06/28/2022] [Accepted: 07/08/2022] [Indexed: 11/17/2022] Open
Abstract
Brain-wide patterns in resting human brains, as either structured functional connectivity (FC) or recurring brain states, have been widely studied in the neuroimaging literature. In particular, resting-state FCs estimated over windowed timeframe neuroimaging data from sub-minutes to minutes using correlation or blind source separation techniques have reported many brain-wide patterns of significant behavioral and disease correlates. The present pilot study utilized a novel whole-head cap-based high-density diffuse optical tomography (DOT) technology, together with data-driven analysis methods, to investigate recurring transient brain-wide patterns in spontaneous fluctuations of hemodynamic signals at the resolution of single timeframes from thirteen healthy adults in resting conditions. Our results report that a small number, i.e., six, of brain-wide coactivation patterns (CAPs) describe major spatiotemporal dynamics of spontaneous hemodynamic signals recorded by DOT. These CAPs represent recurring brain states, showing spatial topographies of hemispheric symmetry, and exhibit highly anticorrelated pairs. Moreover, a structured transition pattern among the six brain states is identified, where two CAPs with anterior-posterior spatial patterns are significantly involved in transitions among all brain states. Our results further elucidate two brain states of global positive and negative patterns, indicating transient neuronal coactivations and co-deactivations, respectively, over the entire cortex. We demonstrate that these two brain states are responsible for the generation of a subset of peaks and troughs in global signals (GS), supporting the recent reports on neuronal relevance of hemodynamic GS. Collectively, our results suggest that transient neuronal events (i.e., CAPs), global brain activity, and brain-wide structured transitions co-exist in humans and these phenomena are closely related, which extend the observations of similar neuronal events recently reported in animal hemodynamic data. Future studies on the quantitative relationship among these transient events and their relationships to windowed FCs along with larger sample size are needed to understand their changes with behaviors and diseased conditions.
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Affiliation(s)
- Ali Fahim Khan
- Stephenson School of Biomedical Engineering, University of Oklahoma, 110 W. Boyd St. DEH room 150, Norman, OK 73019, USA
| | - Fan Zhang
- Stephenson School of Biomedical Engineering, University of Oklahoma, 110 W. Boyd St. DEH room 150, Norman, OK 73019, USA
| | - Guofa Shou
- Stephenson School of Biomedical Engineering, University of Oklahoma, 110 W. Boyd St. DEH room 150, Norman, OK 73019, USA
| | - Han Yuan
- Stephenson School of Biomedical Engineering, University of Oklahoma, 110 W. Boyd St. DEH room 150, Norman, OK 73019, USA; Institute for Biomedical Engineering, Science, and Technology, University of Oklahoma, Norman, USA
| | - Lei Ding
- Stephenson School of Biomedical Engineering, University of Oklahoma, 110 W. Boyd St. DEH room 150, Norman, OK 73019, USA; Institute for Biomedical Engineering, Science, and Technology, University of Oklahoma, Norman, USA.
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Brain-wide neural co-activations in resting human. Neuroimage 2022; 260:119461. [PMID: 35820583 PMCID: PMC9472753 DOI: 10.1016/j.neuroimage.2022.119461] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2021] [Revised: 06/03/2022] [Accepted: 07/08/2022] [Indexed: 11/23/2022] Open
Abstract
Spontaneous neural activity in human as assessed with resting-state functional magnetic resonance imaging (fMRI) exhibits brain-wide coordinated patterns in the frequency of < 0.1 Hz. However, understanding of fast brain-wide networks at the timescales of neuronal events (milliseconds to sub-seconds) and their spatial, spectral, and transitional characteristics remain limited due to the temporal constraints of hemodynamic signals. With milli-second resolution and whole-head coverage, scalp-based electroencephalography (EEG) provides a unique window into brain-wide networks with neuronal-timescale dynamics, shedding light on the organizing principles of brain functions. Using the state-of-the-art signal processing techniques, we reconstructed cortical neural tomography from resting-state EEG and extracted component-based co-activation patterns (cCAPs). These cCAPs revealed brain-wide intrinsic networks and their dynamics, indicating the configuration/reconfiguration of resting human brains into recurring and transitional functional states, which are featured with the prominent spatial phenomena of global patterns and anti-state pairs of co-(de)activations. Rich oscillational structures across a wide frequency band (i.e., 0.6 Hz, 5 Hz, and 10 Hz) were embedded in the nonstationary dynamics of these functional states. We further identified a superstructure that regulated between-state immediate and long-range transitions involving the entire set of identified cCAPs and governed a significant aspect of brain-wide network dynamics. These findings demonstrated how resting-state EEG data can be functionally decomposed using cCAPs to reveal rich dynamic structures of brain-wide human neural activations.
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