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An S, Patel P, Liu C, Skodje RT. Computational Aspects of Single-Molecule Kinetics for Coupled Catalytic Cycles: A Spectral Analysis. J Phys Chem A 2022; 126:3783-3796. [PMID: 35658508 DOI: 10.1021/acs.jpca.2c02153] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Catalysis from single active sites is analyzed using methods developed from single-molecule kinetics. Using a stochastic Markov-state description, the observable properties of general catalytic networks of reactions are expressed using an eigenvalue decomposition of the transition matrix for the Markov process. By the use of a sensitivity analysis, the necessary eigenvalues and eigenvectors are related to the energies of controlling barriers and wells located along the reaction routes. A generalization of the energetic span theory allows the eigenvalues to be computed from several activation energies corresponding to distinct barrier-well pairings. The formalism is demonstrated for model problems and for a physically realistic mechanism for an alkene hydrogenation reaction on a single-atom catalyst. The spectral analysis permits a hierarchy of timescales to be identified from the single-molecule signal, which correspond to specific relaxation modes in the network.
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Affiliation(s)
- Suming An
- Department of Chemistry, University of Colorado, Boulder, Colorado 80309, United States
| | - Prajay Patel
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Lemont, Illinois 60639, United States
| | - Cong Liu
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Lemont, Illinois 60639, United States
| | - Rex T Skodje
- Department of Chemistry, University of Colorado, Boulder, Colorado 80309, United States
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2
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Patel P, Wells RH, Kaphan DM, Delferro M, Skodje RT, Liu C. Computational Investigation of the Role of Active Site Heterogeneity for a Supported Organovanadium(III) Hydrogenation Catalyst. ACS Catal 2021. [DOI: 10.1021/acscatal.1c00688] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Prajay Patel
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Lemont, Illinois 60439-4801, United States
| | - Robert H. Wells
- Department of Chemistry, University of Colorado Boulder, Boulder, Colorado 80309-0215, United States
| | - David M. Kaphan
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Lemont, Illinois 60439-4801, United States
| | - Massimiliano Delferro
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Lemont, Illinois 60439-4801, United States
| | - Rex T. Skodje
- Department of Chemistry, University of Colorado Boulder, Boulder, Colorado 80309-0215, United States
| | - Cong Liu
- Chemical Sciences and Engineering Division, Argonne National Laboratory, Lemont, Illinois 60439-4801, United States
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3
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Cano I, Martínez-Prieto LM, van Leeuwen PWNM. Heterolytic cleavage of dihydrogen (HCD) in metal nanoparticle catalysis. Catal Sci Technol 2021. [DOI: 10.1039/d0cy02399j] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
Supports, ligands and additives can promote heterolytic H2 splitting by a cooperative mechanism with metal nanoparticles.
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Affiliation(s)
- Israel Cano
- Applied Physics Department
- University of Cantabria
- 39005 Santander
- Spain
| | - Luis M. Martínez-Prieto
- Instituto de Tecnología Química
- Universitat Politècnica de València-Consejo Superior de Investigaciones Científicas (UPV-CSIC)
- 46022 Valencia
- Spain
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4
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Maeno Z, Yasumura S, Wu X, Huang M, Liu C, Toyao T, Shimizu KI. Isolated Indium Hydrides in CHA Zeolites: Speciation and Catalysis for Nonoxidative Dehydrogenation of Ethane. J Am Chem Soc 2020; 142:4820-4832. [DOI: 10.1021/jacs.9b13865] [Citation(s) in RCA: 58] [Impact Index Per Article: 11.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- Zen Maeno
- Institute for Catalysis, Hokkaido University, N-21, W-10, Sapporo 001-0021, Japan
| | - Shunsaku Yasumura
- Institute for Catalysis, Hokkaido University, N-21, W-10, Sapporo 001-0021, Japan
| | - Xiaopeng Wu
- Institute for Catalysis, Hokkaido University, N-21, W-10, Sapporo 001-0021, Japan
| | - Mengwen Huang
- Institute for Catalysis, Hokkaido University, N-21, W-10, Sapporo 001-0021, Japan
| | - Chong Liu
- Institute for Catalysis, Hokkaido University, N-21, W-10, Sapporo 001-0021, Japan
| | - Takashi Toyao
- Institute for Catalysis, Hokkaido University, N-21, W-10, Sapporo 001-0021, Japan
- Elements Strategy Initiative for Catalysts and Batteries, Kyoto University, Katsura, Kyoto 615-8520, Japan
| | - Ken-ichi Shimizu
- Institute for Catalysis, Hokkaido University, N-21, W-10, Sapporo 001-0021, Japan
- Elements Strategy Initiative for Catalysts and Batteries, Kyoto University, Katsura, Kyoto 615-8520, Japan
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Kaphan DM, Ferrandon MS, Langeslay RR, Celik G, Wegener EC, Liu C, Niklas J, Poluektov OG, Delferro M. Mechanistic Aspects of a Surface Organovanadium(III) Catalyst for Hydrocarbon Hydrogenation and Dehydrogenation. ACS Catal 2019. [DOI: 10.1021/acscatal.9b02800] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Affiliation(s)
- David M. Kaphan
- Chemical Sciences and Engineering Division, Argonne National Laboratory, 9700 S. Cass Ave., Lemont, Illinois 60439, United States
| | - Magali S. Ferrandon
- Chemical Sciences and Engineering Division, Argonne National Laboratory, 9700 S. Cass Ave., Lemont, Illinois 60439, United States
| | - Ryan R. Langeslay
- Chemical Sciences and Engineering Division, Argonne National Laboratory, 9700 S. Cass Ave., Lemont, Illinois 60439, United States
| | - Gokhan Celik
- Chemical Sciences and Engineering Division, Argonne National Laboratory, 9700 S. Cass Ave., Lemont, Illinois 60439, United States
| | - Evan C. Wegener
- Chemical Sciences and Engineering Division, Argonne National Laboratory, 9700 S. Cass Ave., Lemont, Illinois 60439, United States
| | - Cong Liu
- Chemical Sciences and Engineering Division, Argonne National Laboratory, 9700 S. Cass Ave., Lemont, Illinois 60439, United States
| | - Jens Niklas
- Chemical Sciences and Engineering Division, Argonne National Laboratory, 9700 S. Cass Ave., Lemont, Illinois 60439, United States
| | - Oleg G. Poluektov
- Chemical Sciences and Engineering Division, Argonne National Laboratory, 9700 S. Cass Ave., Lemont, Illinois 60439, United States
| | - Massimiliano Delferro
- Chemical Sciences and Engineering Division, Argonne National Laboratory, 9700 S. Cass Ave., Lemont, Illinois 60439, United States
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Plascencia C, Curtiss LA, Liu C. Hydrogen Activation by Silica-Supported Metal Ion Catalysts: Catalytic Properties of Metals and Performance of DFT Functionals. J Phys Chem A 2019; 123:171-186. [PMID: 30516380 DOI: 10.1021/acs.jpca.8b08340] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Single-site heterogeneous catalysts (SSHC) have received increasing attention due to their well-defined active sites and potentially high specific activity. Detailed computational studies were carried out on a set of potential SSHC's, i.e., silica-supported metal ions, to investigate the reactivity of these catalysts with H2 as well as to evaluate the performance of density functional theory (DFT) methods in conjunction with triple-ζ quality basis sets (i.e., cc-pVTZ) on reaction energetics. The ions considered include 4d and 5d metals as well as several post-transition metal ions. A representative cluster model of silica is used to calculate reaction free energies of the metal hydride formation that results from the heterolytic cleavage of H2 on the M-O bond. The hydride formation free energy is previously shown to be strongly correlated with the catalytic activity of such catalysts for alkene hydrogenation. ONIOM calculations (CCSD(T)//MP2) are used to assess the accuracy and reliability of the MP2 results and it is found that MP2 is a suitable level of theory for gauging the performance of DFT functionals. The performance of various DFT functionals is assessed relative to MP2 results and it is found that the wB97xd and PBE0 functionals have the lowest standard deviation (STD) value while the MN12SX and PBE functionals have the lowest mean absolute deviation (MAD) values. The B3LYP functional is shown to have similar MAD and STD values as the top performing functionals. Potential active SSHC's for exergonic hydrogen activation predicted in this study include mostly late and post transition metal ions, i.e., Au3+, Pd2+, Pt4+, Pd4+, Ir4+, Hg2+, Rh3+, Pb4+, Tl3+, In3+, Ir3+, Os4+, Cd2+, Ru2+, and Ga3+. This study provides important guidance to future computational studies of such catalyst systems.
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Affiliation(s)
- Cesar Plascencia
- Materials Science Division , Argonne National Laboratory , 9700 South Cass Avenue , Lemont Illinois 60439 United States.,Department of Chemistry , Michigan State University , 220 Trowbridge Road , East Lansing , Michigan 48824 United States
| | - Larry A Curtiss
- Materials Science Division , Argonne National Laboratory , 9700 South Cass Avenue , Lemont Illinois 60439 United States
| | - Cong Liu
- Chemical Sciences and Engineering Division , Argonne National Laboratory , 9700 South Cass Avenue , Lemont Illinois 60439 United States
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