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Wei S, Dou Y, Yu Y, Yang J, Yu F, Sha W, Li T. A novel biosensor based on a bio-barcode for the detection of Mycobacterium tuberculosis. ANALYTICAL METHODS : ADVANCING METHODS AND APPLICATIONS 2023. [PMID: 37464896 DOI: 10.1039/d3ay00772c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/20/2023]
Abstract
Tuberculosis (TB), the second (after COVID-19) deadliest infectious killer, is a chronic infectious disease caused by infection with Mycobacterium tuberculosis (M.T.), where early diagnosis and management are the key to containing the condition. Here, we report a novel biosensor for the detection of M.T. DNA based on magnetic separation, urease catalysis and silicon nanowire field effect transistor (SiNW FET) detection. M.T. DNA is sequence-specifically captured by magnetic nanoparticles and urease-labelled silica nanoparticles simultaneously to form a sandwich complex and urea is catalyzed into ammonium carbonate by urease modified on a sandwich complex. By using SiNW FET, the detection of M.T. DNA is realized indirectly by the detection of ammonium carbonate. The limit of detection (LOD) was determined to be 78.541 fM. The specificity of the biosensor was confirmed by detecting a panel of bacterial species. The utility of the biosensor was demonstrated in real-sample analysis and the recovery study of M.T. DNA was done in the genomic DNA extracted from cultured Mycobacterium tuberculosis. The biosensor holds promise to become a rapid, sensitive and accurate method for clinical diagnosis.
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Affiliation(s)
- Shanhong Wei
- State Key Laboratory of Transducer Technology, Shanghai Institute of Microsystem and Information Technology, Chinese Academy of Sciences, Shanghai 200050, China.
- University of Chinese Academy of Sciences (UCAS), Beijing 100049, China
| | - Yanzhi Dou
- State Key Laboratory of Transducer Technology, Shanghai Institute of Microsystem and Information Technology, Chinese Academy of Sciences, Shanghai 200050, China.
| | - Yuanyuan Yu
- Department of Tuberculosis, Shanghai Pulmonary Hospital, School of Medicine, Tongji University, Shanghai 200433, China.
| | - Jinghui Yang
- Department of Clinical Laboratory, Shanghai Pulmonary Hospital, School of Medicine, Tongji University, Shanghai 200433, China
| | - Fangyou Yu
- Department of Clinical Laboratory, Shanghai Pulmonary Hospital, School of Medicine, Tongji University, Shanghai 200433, China
| | - Wei Sha
- Department of Tuberculosis, Shanghai Pulmonary Hospital, School of Medicine, Tongji University, Shanghai 200433, China.
| | - Tie Li
- State Key Laboratory of Transducer Technology, Shanghai Institute of Microsystem and Information Technology, Chinese Academy of Sciences, Shanghai 200050, China.
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Kim AL, Dubrovskii AV, Musin EV, Tikhonenko SA. Determination of Phenol with Peroxidase Immobilized on CaCO3. Int J Mol Sci 2023; 24:ijms24076766. [PMID: 37047739 PMCID: PMC10094929 DOI: 10.3390/ijms24076766] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2023] [Revised: 03/31/2023] [Accepted: 04/03/2023] [Indexed: 04/08/2023] Open
Abstract
Phenols are widely used in industries despite their toxicity, which requires governments to limit their concentration in water to 5 mg/L before discharge to the city sewer. Thus, it is essential to develop a rapid, simple, and low-cost detection method for phenol. This study explored two pathways of peroxidase immobilization to develop a phenol detection system: peroxidase encapsulation into polyelectrolyte microcapsules and peroxidase captured by CaCO3. The encapsulation of peroxidase decreased enzyme activity by 96%; thus, this method cannot be used for detection systems. The capturing process of peroxidase by CaCO3 microspherulites did not affect the maximum reaction rate and the Michaelis constant of peroxidase. The native peroxidase—Vmax = 109 µM/min, Km = 994 µM; CaCO3–peroxidase—Vmax = 93.5 µM/min, Km = 956 µM. Ultimately, a reusable phenol detection system based on CaCO3 microparticles with immobilized peroxidase was developed, capable of detecting phenol in the range of 700 ng/mL to 14 µg/mL, with an error not exceeding 5%, and having a relatively low cost and production time. The efficiency of the system was confirmed by determining the content of phenol in a paintwork product.
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Affiliation(s)
- Aleksandr L. Kim
- Institute of Theoretical and Experimental Biophysics Russian Academy of Science, Institutskaya St., 3, 142290 Puschino, Moscow Region, Russia
| | - Alexey V. Dubrovskii
- Institute of Theoretical and Experimental Biophysics Russian Academy of Science, Institutskaya St., 3, 142290 Puschino, Moscow Region, Russia
| | - Egor V. Musin
- Institute of Theoretical and Experimental Biophysics Russian Academy of Science, Institutskaya St., 3, 142290 Puschino, Moscow Region, Russia
| | - Sergey A. Tikhonenko
- Institute of Theoretical and Experimental Biophysics Russian Academy of Science, Institutskaya St., 3, 142290 Puschino, Moscow Region, Russia
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Plekhanova YV, Rai M, Reshetilov AN. Nanomaterials in bioelectrochemical devices: on applications enhancing their positive effect. 3 Biotech 2022; 12:231. [PMID: 35996672 PMCID: PMC9391563 DOI: 10.1007/s13205-022-03260-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2022] [Accepted: 07/17/2022] [Indexed: 11/01/2022] Open
Abstract
Electrochemical biosensors and biofuel cells are finding an ever-increasing practical application due to several advantages. Biosensors are miniature measuring devices, which can be used for on-the-spot analyses, with small assay times and sample volumes. Biofuel cells have dual benefits of environmental cleanup and electric energy generation. Application of nanomaterials in biosensor and biofuel-cell devices increases their functioning efficiency and expands spheres of use. This review discusses the potential of nanomaterials in improving the basic parameters of bioelectrochemical systems, including the sensitivity increase, detection lower-limit decrease, detection-range change, lifetime increase, substrate-specificity control. In most cases, the consideration of the role of nanomaterials links a certain type of nanomaterial with its effect on the bioelectrochemical device upon the whole. The review aims at assessing the effects of nanomaterials on particular analytical parameters of a biosensor/biofuel-cell bioelectrochemical device.
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Affiliation(s)
- Yulia V. Plekhanova
- G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Pushchino Center for Biological Research of the Russian Academy of Sciences, 142290 Pushchino, Russian Federation
| | - Mahendra Rai
- Nanobiotechnology Laboratory, Department of Biotechnology, Sant Gadge Baba Amravati University, Amravati, MH 444602 India
| | - Anatoly N. Reshetilov
- G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Pushchino Center for Biological Research of the Russian Academy of Sciences, 142290 Pushchino, Russian Federation
- Tula State University, 300012 Tula, Russian Federation
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A Study of the Buffer Capacity of Polyelectrolyte Microcapsules Depending on Their Ionic Environment and Incubation Temperature. Int J Mol Sci 2022; 23:ijms23126608. [PMID: 35743051 PMCID: PMC9223497 DOI: 10.3390/ijms23126608] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2022] [Revised: 06/10/2022] [Accepted: 06/12/2022] [Indexed: 02/06/2023] Open
Abstract
Polyelectrolyte microcapsules (PMCs) are used in the development of new forms of drugs, coatings and diagnostic systems. Their buffer capacity, depending on the conditions of the medium, has not been practically studied, although it can affect the structure of both the capsule itself and the encapsulated agents. In this connection, we studied the buffer capacity of polyelectrolyte microcapsules of the composition (polystyrene sulfonate/polyallylamine)3 ((PSS/PAH)3) depending on the concentration and the type of salt in solution, as well as the microcapsule incubation temperature. It was found that the buffer capacity of microcapsules in the presence of mono- and di-valent salts of the same ionic strength did not differ practically. Increasing the NaCl concentration to 1 M led to an increase of buffer capacity of PMCs at pH ≥ 5, and an increase in NaCl concentration above 1 M did not change buffer capacity. The study of the buffer capacity of pre-heated PMCs showed that buffer capacity decreased with increasing incubation temperature, which was possibly due to the compaction of the PMCs and an increase in the number of compensated PAH sites. The addition of 1 M sodium chloride to heated PMCs presumably reversed the process described above, since an increase in the ionic strength of the solution led to an increase of the buffer capacity of the PMCs. The effects described above confirm the hypothesis put forward that the buffer properties of microcapsules are determined by uncompensated PAH regions in their composition.
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Dhinasekaran D, Soundharraj P, Jagannathan M, Rajendran AR, Rajendran S. Hybrid ZnO nanostructures modified graphite electrode as an efficient urea sensor for environmental pollution monitoring. CHEMOSPHERE 2022; 296:133918. [PMID: 35150706 DOI: 10.1016/j.chemosphere.2022.133918] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/28/2021] [Revised: 01/19/2022] [Accepted: 02/05/2022] [Indexed: 06/14/2023]
Abstract
Herein, we propose a facile electrochemical sensing platform for urea detection using pencil graphite electrode modified nanocomposites of CuO/ZnO and Fe2O3/ZnO. The detection of urea is essential to monitor for identifying its pollution in the water, at the soil surface and in diagnosing urea cycle disorder related diseases. Therefore, an effective, accurate, cost-effective method of diagnosis is urgently needed. Nanostructured metal oxides have the potential ability to detect molecules even at trace level and to explore this, the present work is formulated with Cu and Fe based ZnO nanocomposites for enhancing the sensing performance towards electrochemical sensing of urea. The sensing responses were confirmed from the increase in oxidation current with respect to the concentration of urea. The results show that Fe2O3/ZnO coated graphite electrode has a higher response against urea compared to ZnO and CuO/ZnO. The cyclic voltammetry studies also validate urea sensing of Fe-ZnO in the linear range of 0.8 μg/mL to 4 μg/mL, with the detection limit of 2.5 μg/mL. This suggests that the cost-effective pencil graphite electrode modified Fe2O3/ZnO can be utilized as a promising analytical tool for urea sensing.
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Affiliation(s)
| | | | | | - Ajay Rakkesh Rajendran
- Department of Physics and Nanotechnology, SRM Institute of Science and Technology, Kattankulathur, Chennai, India
| | - Saravanan Rajendran
- Laboratorio de Investigaciones Ambientales Zonas Áridas, Departamento de Ingeniería Mecánica, Facultad de Ingeniería, Universidad de Tarapacá, Avda. General Velásquez 1775, Arica, Chile
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Dubrovskii AV, Kim AL, Musin EV, Ramazanov BR, Tikhonenko SA. The Discovery of the Buffer Capacity of Various Types of Polyelectrolyte Microcapsules. Polymers (Basel) 2021; 13:4026. [PMID: 34833325 PMCID: PMC8620602 DOI: 10.3390/polym13224026] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2021] [Revised: 11/17/2021] [Accepted: 11/19/2021] [Indexed: 11/17/2022] Open
Abstract
Polyelectrolyte microcapsules, which are obtained by the method of alternate adsorption of oppositely charged polyelectrolytes onto colloidal particles of micron size, are widely used in science and industry. Nevertheless, the properties of microcapsules are still poorly understood. In particular, there is no information in the literature on the buffer capacity. However, information on the presence of a buffer capacity and an understanding of its mechanisms can both simplify the use of microcapsules and expand the scope of their application. In this regard, the buffer capacity of various types of microcapsules was studied. It was found that polyelectrolyte microcapsules consisting of polyallylamine, and polystyrene sulfonate have a buffer capacity. In addition, in an acidic medium, the buffer capacity of microcapsules containing BSA is significantly greater than that of microcapsules without protein. This is due to the fact that BSA contributes to the buffering of microcapsules. Differences in the behaviour of the buffer capacity of microcapsules with the composition (PAH/PSS)3 and (PSS/PAH)3 were found. In addition, a hypothesis has been proposed that regions of unbound polyallylamine are responsible for the buffering properties of polyelectrolyte microcapsules. This hypothesis is confirmed by the fact that incubation of microcapsules in 0.5 M NaCl increases the amount of unbound polyallylamine, which leads to an increase in the buffer capacity of microcapsules at alkaline pH values higher than the buffer capacity of capsules in an aqueous solution.
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Affiliation(s)
- Alexey V. Dubrovskii
- Institute of Theoretical and Experimental Biophysics Russian Academy of Science, Institutskaya st., 3, 142290 Puschino, Russia; (A.V.D.); (A.L.K.); (E.V.M.)
| | - Aleksandr L. Kim
- Institute of Theoretical and Experimental Biophysics Russian Academy of Science, Institutskaya st., 3, 142290 Puschino, Russia; (A.V.D.); (A.L.K.); (E.V.M.)
| | - Egor V. Musin
- Institute of Theoretical and Experimental Biophysics Russian Academy of Science, Institutskaya st., 3, 142290 Puschino, Russia; (A.V.D.); (A.L.K.); (E.V.M.)
| | - Bulat R. Ramazanov
- Faculty of Biology, M. V. Lomonosov Moscow State University, 119991 Moscow, Russia;
| | - Sergey A. Tikhonenko
- Institute of Theoretical and Experimental Biophysics Russian Academy of Science, Institutskaya st., 3, 142290 Puschino, Russia; (A.V.D.); (A.L.K.); (E.V.M.)
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Musin EV, Kim AL, Dubrovskii AV, Tikhonenko SA. New sight at the organization of layers of multilayer polyelectrolyte microcapsules. Sci Rep 2021; 11:14040. [PMID: 34234247 PMCID: PMC8263573 DOI: 10.1038/s41598-021-93565-2] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2021] [Accepted: 06/22/2021] [Indexed: 11/08/2022] Open
Abstract
In this work, the mutual arrangement of polyelectrolytes of multilayer polyelectrolyte microcapsules (with layers-[PAH/PSS]3PAH) by determination of the dissociation level of polyallylamine (PAH) from the surface of a polyelectrolyte microcapsules (PMC) of various types was studied: PMC with a dissolved CaCO3 core after preparation, PMC with an undissolved CaCO3 core and PMC with an encapsulated protein. It was concluded that the polyelectrolyte layers are mixed in the entire shell of the capsules with a dissolved CaCO3 core. In the case of the PMC with an undissolved CaCO3 core, such mixing of polyelectrolyte layers does not occur. That fact allows us to conclude that the mixing of polyelectrolytes layers mixing at the stage of dissolution of CaCO3 core. The PMC with encapsulated protein has partial mixing of polyelectrolytes layers. That phenomenon may be due to the fact that seven-layered protein-containing microcapsules already have a dense and well-formed shell. The obtained data correlate with the data on the study of the surface charge of microcapsules.
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Affiliation(s)
- Egor V Musin
- Institute of Theoretical and Experimental Biophysics, Russian Academy of Science, Institutskaya St., 3, Puschino, 142290, Moscow Region, Russia
| | - Aleksandr L Kim
- Institute of Theoretical and Experimental Biophysics, Russian Academy of Science, Institutskaya St., 3, Puschino, 142290, Moscow Region, Russia
| | - Alexey V Dubrovskii
- Institute of Theoretical and Experimental Biophysics, Russian Academy of Science, Institutskaya St., 3, Puschino, 142290, Moscow Region, Russia
| | - Sergey A Tikhonenko
- Institute of Theoretical and Experimental Biophysics, Russian Academy of Science, Institutskaya St., 3, Puschino, 142290, Moscow Region, Russia.
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Erol K, Yıldız E, Alacabey İ, Karabörk M, Uzun L. Magnetic diatomite for pesticide removal from aqueous solution via hydrophobic interactions. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2019; 26:33631-33641. [PMID: 31587166 DOI: 10.1007/s11356-019-06423-0] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2019] [Accepted: 09/03/2019] [Indexed: 06/10/2023]
Abstract
Pesticides are highly hazardous chemicals for the environment and human health and their use in agriculture is constantly increasing. Although 1,1,1-trichloro-2,2-bis(4-chlorophenyl) ethane 4,4'-DDT was banned at developed countries, it is still one of the most dangerous of chemical due to accumulation in the environment. It is known that the toxicity of DDT affects some enzyme systems biochemically. The main motivation of this study is to develop an effective adsorbate for the removal DDT, which was chosen as a model hydrophobic pesticide, out of aqueous systems. For this purpose, the bare diatomite particles were magnetically modified and a hydrophobic ligand attached to enhance its adsorptive and physio-chemical features. Under optimal conditions, a high adsorption capacity, around 120 mg/g with the hydrophobic and magnetic diatomite particles, modification of the diatomite particles reduced average pores diameter whereas surface area and total pore volume increased (around 15-folds). After five consecutive adsorption-desorption cycles, no significant decrease in adsorption capability was observed. The adsorption isotherms (Langmuir, Freundlich, and Flory-Huggins) applied to the data indicated that the adsorption process occurred via monolayer adsorption in an entropy-driven manner. The kinetic data also revealed the quick adsorption process without any diffusion limitations. Graphical Abstract.
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Affiliation(s)
- Kadir Erol
- Department of Property Protection and Security, Osmancık Ömer Derindere Vocational School, Hitit University, 19500, Osmancık, Turkey.
| | - Emrecan Yıldız
- Department of Chemistry, Faculty of Science, Hacettepe University, 06800, Ankara, Turkey
| | - İhsan Alacabey
- Vocational School of Health Services, Mardin Artuklu University, 47200, Mardin, Turkey
| | - Muharrem Karabörk
- Department of Chemistry, Faculty of Arts and Sciences, Kahramanmaraş Sütçü İmam University, 46100, Kahramanmaraş, Turkey
| | - Lokman Uzun
- Department of Chemistry, Faculty of Science, Hacettepe University, 06800, Ankara, Turkey
- Advanced Technologies Application and Research Center, Hacettepe University, 06800, Ankara, Turkey
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Zhang S, Geryak R, Geldmeier J, Kim S, Tsukruk VV. Synthesis, Assembly, and Applications of Hybrid Nanostructures for Biosensing. Chem Rev 2017; 117:12942-13038. [DOI: 10.1021/acs.chemrev.7b00088] [Citation(s) in RCA: 206] [Impact Index Per Article: 25.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Shuaidi Zhang
- School of Materials Science
and Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0245, United States
| | - Ren Geryak
- School of Materials Science
and Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0245, United States
| | - Jeffrey Geldmeier
- School of Materials Science
and Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0245, United States
| | - Sunghan Kim
- School of Materials Science
and Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0245, United States
| | - Vladimir V. Tsukruk
- School of Materials Science
and Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0245, United States
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Dubrovsky AV, Shabarchina LI, Tikhonenko SA. Polyelectrolyte-based enzymatic diagnosticum with precipitation detection system for urea assay in solution. APPL BIOCHEM MICRO+ 2017. [DOI: 10.1134/s0003683817040044] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Voronin DV, Sindeeva OA, Kurochkin MA, Mayorova O, Fedosov IV, Semyachkina-Glushkovskaya O, Gorin DA, Tuchin VV, Sukhorukov GB. In Vitro and in Vivo Visualization and Trapping of Fluorescent Magnetic Microcapsules in a Bloodstream. ACS APPLIED MATERIALS & INTERFACES 2017; 9:6885-6893. [PMID: 28186726 DOI: 10.1021/acsami.6b15811] [Citation(s) in RCA: 75] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
Remote navigation and targeted delivery of biologically active compounds is one of the current challenges in the development of drug delivery systems. Modern methods of micro- and nanofabrication give us new opportunities to produce particles and capsules bearing cargo to deploy and possess magnetic properties to be externally navigated. In this work we explore multilayer composite magnetic microcapsules as targeted delivery systems in vitro and in vivo studies under natural conditions of living organism. Herein, we demonstrate magnetic addressing of fluorescent composite microcapsules with embedded magnetite nanoparticles in blood flow environment. First, the visualization and capture of the capsules at the defined blood flow by the magnetic field are shown in vitro in an artificial glass capillary employing a wide-field fluorescence microscope. Afterward, the capsules are visualized and successfully trapped in vivo into externally exposed rat mesentery microvessels. Histological analysis shows that capsules infiltrate small mesenteric vessels whereas large vessels preserve the blood microcirculation. The effect of the magnetic field on capsule preferential localization in bifurcation areas of vasculature, including capsule retention at the site once external magnet is switched off is discussed. The research outcome demonstrates that microcapsules can be effectively addressed in a blood flow, which makes them a promising delivery system with remote navigation by the magnetic field.
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Affiliation(s)
| | | | | | | | | | | | | | - Valery V Tuchin
- Interdisciplinary Laboratory of Biophotonics, National Research Tomsk State University , Tomsk 634050, Russia
- Laboratory of Laser Diagnostics of Technical and Living Systems, Precision Mechanics and Control Institute of the Russian Academy of Sciences , Saratov 410028, Russia
| | - Gleb B Sukhorukov
- School of Engineering and Materials Science, Queen Mary University of London , Mile End Road, London E1 4NS, United Kingdom
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