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Xiang K, Li Y, Ford W, Land W, Schaffer JD, Congdon R, Zhang J, Sadik O. Automated analysis of food-borne pathogens using a novel microbial cell culture, sensing and classification system. Analyst 2017; 141:1472-82. [PMID: 26818563 DOI: 10.1039/c5an02614h] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We hereby report the design and implementation of an Autonomous Microbial Cell Culture and Classification (AMC(3)) system for rapid detection of food pathogens. Traditional food testing methods require multistep procedures and long incubation period, and are thus prone to human error. AMC(3) introduces a "one click approach" to the detection and classification of pathogenic bacteria. Once the cultured materials are prepared, all operations are automatic. AMC(3) is an integrated sensor array platform in a microbial fuel cell system composed of a multi-potentiostat, an automated data collection system (Python program, Yocto Maxi-coupler electromechanical relay module) and a powerful classification program. The classification scheme consists of Probabilistic Neural Network (PNN), Support Vector Machines (SVM) and General Regression Neural Network (GRNN) oracle-based system. Differential Pulse Voltammetry (DPV) is performed on standard samples or unknown samples. Then, using preset feature extractions and quality control, accepted data are analyzed by the intelligent classification system. In a typical use, thirty-two extracted features were analyzed to correctly classify the following pathogens: Escherichia coli ATCC#25922, Escherichia coli ATCC#11775, and Staphylococcus epidermidis ATCC#12228. 85.4% accuracy range was recorded for unknown samples, and within a shorter time period than the industry standard of 24 hours.
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Affiliation(s)
- Kun Xiang
- Center for Advanced Sensors & Environmental Systems (CASE), Department of Chemistry, State University of New York at Binghamton, P.O Box 6000, Binghamton, NY 13902, USA.
| | - Yinglei Li
- Department of Biomedical Engineering, State University of New York at Binghamton, P.O Box 6000, Binghamton, NY 13902, USA
| | - William Ford
- Department of Biomedical Engineering, State University of New York at Binghamton, P.O Box 6000, Binghamton, NY 13902, USA
| | - Walker Land
- Department of Biomedical Engineering, State University of New York at Binghamton, P.O Box 6000, Binghamton, NY 13902, USA
| | - J David Schaffer
- Department of Biomedical Engineering, State University of New York at Binghamton, P.O Box 6000, Binghamton, NY 13902, USA
| | - Robert Congdon
- Center for Advanced Sensors & Environmental Systems (CASE), Department of Chemistry, State University of New York at Binghamton, P.O Box 6000, Binghamton, NY 13902, USA.
| | - Jing Zhang
- Center for Advanced Sensors & Environmental Systems (CASE), Department of Chemistry, State University of New York at Binghamton, P.O Box 6000, Binghamton, NY 13902, USA.
| | - Omowunmi Sadik
- Center for Advanced Sensors & Environmental Systems (CASE), Department of Chemistry, State University of New York at Binghamton, P.O Box 6000, Binghamton, NY 13902, USA.
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Ooi SY, Teoh ABJ, Pang YH, Hiew BY. Image-based handwritten signature verification using hybrid methods of discrete Radon transform, principal component analysis and probabilistic neural network. Appl Soft Comput 2016. [DOI: 10.1016/j.asoc.2015.11.039] [Citation(s) in RCA: 41] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Ying X, Liu W, Hui G, Fu J. E-nose based rapid prediction of early mouldy grain using probabilistic neural networks. Bioengineered 2015; 6:222-6. [PMID: 25714125 DOI: 10.1080/21655979.2015.1022304] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022] Open
Abstract
In this paper, early mouldy grain rapid prediction method using probabilistic neural network (PNN) and electronic nose (e-nose) was studied. E-nose responses to rice, red bean, and oat samples with different qualities were measured and recorded. E-nose data was analyzed using principal component analysis (PCA), back propagation (BP) network, and PNN, respectively. Results indicated that PCA and BP network could not clearly discriminate grain samples with different mouldy status and showed poor predicting accuracy. PNN showed satisfying discriminating abilities to grain samples with an accuracy of 93.75%. E-nose combined with PNN is effective for early mouldy grain prediction.
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Affiliation(s)
- Xiaoguo Ying
- a School of Information Engineering; Key Laboratory of Forestry Intelligent Monitoring and Information Technology of Zhejiang Province; Zhejiang A & F University ; Linan , China
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