Structural and fluorescence quenching characterization of hematite nanoparticles

Spectroscopy and molecular simulation on the interaction of Nano-Kaempferol prepared by oil-in-water with two carrier proteins: An investigation of protein-protein interaction

In this work, the interaction of human serum albumin (HSA) and human holo-transferrin (HTF) with the prepared Nano-Kaempferol (Nano-KMP) through oil-in-water procedure was investigated in the form of binary and ternary systems by the utilization of different spectroscopy techniques along with molecular simulation and cancer cell experiments. According to fluorescence spectroscopy outcomes, Nano-KMP is capable of quenching both proteins as binary systems by a static mechanism, while in the form of (HSA-HTF) Nano-KMP as the ternary system, an unlinear Stern-Volmer plot was elucidated with the occurrence of both dynamic and static fluorescence quenching mechanisms in the binding interaction. In addition, the two acquired Ksv values in the ternary system signified the existence of two sets of binding sites with two different interaction behaviors. The binding constant values of HSA-Nano KMP, HTF-Nano-KMP, and (HSA-HTF) Nano-KMP complexes formation were (2.54 ± 0.03) × 104, (2.15 ± 0.02) × 104 and (1.43 ± 0.04) × 104M-1at the first set of binding sites and (4.68 ± 0.05) × 104 M-1 at the second set of binding sites, respectively. The data of thermodynamic parameters confirmed the major roles of hydrogen binding and van der Waals forces in the formation of HSA-Nano KMP and HTF-Nano KMP complexes. The thermodynamic parameter values of (HSA-HTF) Nano KMP revealed the dominance of hydrogen binding and van der Waals forces in the first set of binding sites and hydrophobic forces for the second set of binding sites. Resonance light scattering (RLS) analysis displayed the existence of a different interaction behavior for HSA-HTF complex in the presence of Nano-KMP as the ternary system. Moreover, circular dichroism (CD) technique affirmed the conformational changes of the secondary structure of proteins as binary and ternary systems. Molecular docking and molecular dynamics simulations (for 100 ns) were performed to investigate the mechanism of KMP binding to HSA, HTF, and HSA-HTF. Next to observing a concentration and time-dependent cytotoxicity, the down regulation of PI3K/AkT/mTOR pathway resulted in cell cycle arrest in SW480 cells.

Remediation of cadmium and lead contaminated soils using Fe-OM based materials

Iron oxide-lignin composites (GLS) were prepared based on the significant role of Fe-OM in the environmental behaviour of heavy metals and lignin binding with iron oxide preferentially in soil. GLS was applied in Cd/Pb immobilization and the stability under acid rain was investigated. The results show that the iron oxide appeared weakly crystalline or amorphous similar to 2-line ferrihydrite after the addition of lignin. Agglomerates of nanoparticles with higher adsorption capacity were observed for GLS. The mobility factor (MF) of Cd/Pb in the soil decreased rapidly after adding GLS. At the 3% dosage, the MF of Cd and Pb in the soil was decreased by 58.94% and 78.15% respectively, which was approximately 5 times that of goethite (GE). The mobile and exchangeable Cd/Pb were converted to organic, amorphous Fe oxide-bound and residue fractions. Under acid rain conditions, MF continues to decline for the GLS group, increasing the organic and amorphous Fe oxide-bound fractions, while for control group (CK) and GE, the trend was the opposite. Lignin could inhibit iron oxide dissolution and stabilize the combination of Cd/Pb and iron oxides in soil. The better stability performance of GLS for Cd/Pb may be related to the higher adsorption capacity and microstructural difference after iron oxide combined with lignin.

Magnetic activated charcoal/Fe2O3 nanocomposite for the adsorptive removal of 2,4-Dichlorophenoxyacetic acid (2,4-D) from aqueous solutions: Synthesis, characterization, optimization, kinetic and isotherm studies

Magnetic activated charcoal/Fe₂O₃ nanocomposite (AC/Fe₂O₃NC) was fabricated using Spondias dulcis leaf extract by a facile method and used for the adsorptive removal of 2,4-Dichlorophenoxyacetic acid (2,4-D) from aqueous solutions for the first time. The nanocomposite was characterized by methods such as FE-SEM, EDS, XRD, FTIR, TGA, VSM, and BET to identify and confirm the surface morphology, elemental composition, crystalline nature, functional groups, thermal stability, magnetic behavior, and surface area respectively. Box-Behnken Design (BBD) - an optimization method, which belongs to the Response surface methodology (RSM) and a modeling tool - Artificial Neural Network (ANN) were employed to design, optimize and predict the relationship between the input parameters (pH, initial concentration of 2,4-D, time and agitation speed) versus the output parameter (adsorption efficiency of 2,4-D). Adsorption efficiency of 98.12% was obtained at optimum conditions (pH: 2.05, initial concentration: 32 ppm, contact time: 100 min, agitation speed: 130 rpm, temperature: 30 °C, and dosage: 0.2 g/L). The predictive ability of the ANN was superior (R² = 0.99) than the quadratic model, given by the RSM (R² = 0.93). The equilibrium data were best-fitted to Langmuir isotherm (R² = 0.9944) and the kinetics obeyed pseudo-second-order model (R² = 0.9993) satisfactorily. Thermodynamic studies revealed the spontaneity and exothermic nature of adsorption. The maximum adsorption capacity, q_m was found to be 255.10 mg/g, substantially larger than the reported values for 2,4-D adsorption by other magnetic nanoadsorbents. Therefore, this nanoadsorbent may be utilized as an excellent alternative for the elimination of 2,4-D from the waterbodies.

Interaction of silver nanoparticles with catechol O-methyltransferase: Spectroscopic and simulation analyses

Catechol O-methyltransferase, an enzyme involved in the metabolism of catechol containing compounds, catalyzes the transfer of a methyl group between S-adenosylmethionine and the hydroxyl groups of the catechol. Furthermore it is considered a potential drug target for Parkinson’s disease as it metabolizes the drug levodopa. Consequently inhibitors of the enzyme would increase levels of levodopa. In this study, absorption, fluorescence and infrared spectroscopy as well as computational simulation studies investigated human soluble catechol O-methyltransferase interaction with silver nanoparticles. The nanoparticles form a corona with the enzyme and quenches the fluorescence of Trp143. This amino acid maintains the correct structural orientation for the catechol ring during catalysis through a static mechanism supported by a non-fluorescent fluorophore–nanoparticle complex. The enzyme has one binding site for AgNPs in a thermodynamically spontaneous binding driven by electrostatic interactions as confirmed by negative ΔG and ΔH and positive ΔS values. Fourier transform infrared spectroscopy within the amide I region of the enzyme indicated that the interaction causes relaxation of its β−structures, while simulation studies indicated the involvement of six polar amino acids. These findings suggest AgNPs influence the catalytic activity of catechol O-methyltransferase, and therefore have potential in controlling the activity of the enzyme.

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A recombinant soluble human catechol O-methyltransferase was inhibited by silver nanoparticles.

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Inhibition by AgNPs was concentration and size dependent.

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The binding mechanism was through spontaneous static quenching, driven by positive ΔS, and negative ΔH and ΔG.

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Stern-Volmer analysis suggested binding of AgNPs with Trp143.

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In silico indicate relaxation of β-sheets and the interaction of AgNPs with 6 amino acids in the enzyme’s helical structures.

Effect of lignosulfonate on the adsorption performance of hematite for Cd(II)

Lignin is a precursor of humus in soil and sediment. Lignin can be separated from vascular plants in the form of lignosulfonate via pulping processes. On the other hand, composites of iron oxide and organic matter can adsorb heavy metals, and thus influence the migration of these heavy metals in the environment. In this paper, a hematite/lignosulfonate composite (HLS) was prepared via coprecipitation to compare the adsorption performance of hematite (α-Fe₂O₃) toward Cd(II) before and after the incorporation of lignosulfonate (LS). The HLS is found to exhibit a weakly crystalline structure and possess a large number of nanoscale particles. Specific surface area of HLS (291.97 m²/g) is about 11 times that of α-Fe₂O₃, and the pore volume of HLS (0.22 cm³/g) is twice that of α-Fe₂O₃. The adsorption of Cd(II) is well illustrated by the pseudo-second-order adsorption kinetics and the initial adsorption rate (h) of HLS is 13.83 times that of α-Fe₂O₃. The maximum adsorption capacities are significantly improved from 4.89-6.35 mg/g (α-Fe₂O₃) to 39.03-53.65 mg/g (HLS). A greater affinity and more favorable association between Cd(II) and HLS is observed via fitting models. The incorporation of LS provides HLS with significantly better adsorption properties toward Cd(II) than α-Fe₂O₃, as is further confirmed by FT-IR and XPS characterization. Fe-O-O-H and Fe-O-H structures as well as more hydroxyl groups are observed, which promote the adsorption performance since the process are mainly influenced by complexation via coordination bonds.

Biologically synthesized ZnS quantum dots as fluorescent probes for lead (II) sensing

This manuscript presents a robust strategy for selective Pb(II) sensing based on a fluorescence turn-off mechanism using ZnS quantum dots (QDs) biosynthesized using Aspergillus sp. The biogenic nanoprobe displayed marked sensing efficiency in the presence of Pb ions over concentration ranges from 5 to 100 μM with limits of detection of around 2.45 μM. Performance optimization studies revealed that the maximum fluorescence quenching efficiency was obtained in the presence of [ZnS NPs] at 4 mg/ml, and alkaline pH of 10 recorded under stable ambient temperature for approximately 5 min for the quenching process. Advanced morphological analysis indicated that the bio-sensing mechanism was essentially a surface-based phenomenon in which the Pb ions were in very close proximity to the QDs and formed stable ground-state Pb-ZnS complexes, resulting in a quenched fluorescence of the QDs. Simultaneously, a larger fraction of Pb ions interacted via collisions with the excited ZnS QDs and resulted in an effective energy transfer from the excited QDs to the Pb ions, therefore resulting in an obvious decrease in QD fluorescence. These insights were well supported by theoretical analysis using Stern-Volmer plots and sphere-of-action models.

Magnetic Silica-Coated Iron Oxide Nanochains as Photothermal Agents, Disrupting the Extracellular Matrix, and Eradicating Cancer Cells

Cancerous cells and the tumor microenvironment are among key elements involved in cancer development, progression, and resistance to treatment. In order to tackle the cells and the extracellular matrix, we herein propose the use of a class of silica-coated iron oxide nanochains, which have superior magnetic responsiveness and can act as efficient photothermal agents. When internalized by different cancer cell lines and normal (non-cancerous) cells, the nanochains are not toxic, as assessed on 2D and 3D cell culture models. Yet, upon irradiation with near infrared light, the nanochains become efficient cytotoxic photothermal agents. Besides, not only do they generate hyperthermia, which effectively eradicates tumor cells in vitro, but they also locally melt the collagen matrix, as we evidence in real-time, using engineered cell sheets with self-secreted extracellular matrix. By simultaneously acting as physical (magnetic and photothermal) effectors and chemical delivery systems, the nanochain-based platforms offer original multimodal possibilities for prospective cancer treatment, affecting both the cells and the extracellular matrix.

Iron oxide nanoparticle phytotoxicity to the aquatic plant Lemna minor: effect on reactive oxygen species (ROS) production and chlorophyll a/chlorophyll b ratio

Although iron oxide occurs naturally in the environment, iron oxide nanoparticles have distinct mobility, reactivity, and toxicity, which can harm the human health and nature. This scenario has motivated the investigation of the toxic effects of iron oxide nanoparticles (akaganeite predominance + hematite) on the aquatic plant Lemna minor. First, nanoparticles were synthesized and characterized; then, different iron oxide NP concentrations were added to Lemna minor culture. After 7 days, all the Lemna minor leaves died, irrespective of the added NP concentration. The iron oxide NP impact on the plant was evaluated based on malondialdehyde (MDA) production from thiobarbituric acid reactive substances (TBARS), which was dose-dependent; i.e., lipid peroxidation in the plant increased with rising iron oxide NP concentration. The chlorophyll content decreased at high iron oxide NP concentrations, which disrupted the light absorption mechanism. Fe accumulation in Lemna minor roots also occurred, which can harm nutrient uptake. Therefore, the iron oxide NP toxic impact on plants and related ecosystems requires further studies in order to prevent environmental damage.

Different dissolved organic matter (DOM) characteristics lead to diverse atrazine adsorption traits on the non-rhizosphere and rhizosphere soil of Pennisetum americanum (L.) K. Schum

Plant activities might alter the environmental behavior of organic pollutants in rhizosphere soil during phytoremediation. To further illustrate the mechanisms underlying the varying adsorption about the different adsorbing abilities of rhizosphere soil (RS) and non-rhizosphere soil (NRS) for the same pollutant, atrazine was selected to investigate the adsorption traits in the NRS and RS of Pennisetum americanum (L.) K. Schum (P. americanum), a potential phytoremediator of atrazine pollution. Furthermore, the different fluorescence spectral properties of the dissolved organic matter (DOM) extracted from RS and NRS when binding with atrazine were also investigated. RS exhibited a higher atrazine adsorption capacity than NRS, although the kinetic and isothermal properties of atrazine adsorption onto the two kinds soil were described by a pseudo second-order model and the Freundlich model. The DOM extracted from RS showed a stronger atrazine-binding ability than that extracted from NRS, as proven by the much more obvious decrease in fluorescence intensity when binding with atrazine. Although synchronous fluorescence spectra analysis suggested that both DOM types bind atrazine using a static fluorescence quenching mechanism, Fourier transform infrared spectroscopy showed that some distinct functional groups, which might liable to combine with atrazine, were found in only the DOM extracted from RS. Considering the findings mentioned above and the fact that the typical chemical characteristics of RS were different from those of NRS, we concluded that the P. americanum enhances the atrazine adsorption ability of RS by regulating the chemical characteristics and atrazine-binding ability of DOM in RS.

Nanoprobe Synthesized by Magnetotactic Bacteria, Detecting Fluorescence Variations under Dissociation of Rhodamine B from Magnetosomes following Temperature, pH Changes, or the Application of Radiation

We report a method of fabrication of fluorescent magnetosomes, designated as MCR400, in which 400 μM of rhodamine B are introduced in the growth medium of AMB-1 magnetotactic bacteria and fluorescent magnetosomes are then extracted from these bacteria. These fluorescent magnetosomes behave differently from most fluorescent nanoprobes, which often lead to fluorescence losses over time due to photobleaching. Indeed, when MCR400 are heated to 30-90 °C, brought to an acidic pH, or exposed to radiations, we observed that their fluorescence intensity increased. We attributed this behavior to the dissociation of rhodamine B from the magnetosomes. Interestingly, enhanced fluorescence was also observed in vitro when MCR400 were mixed with either primary macrophages or tumor cells (TC1-GFP or RG2-Cells) or in vivo when MCR400 were introduced in rat glioblastoma. We showed that MCR400 internalize in tumor and immune cells (macrophages) leading to enhanced fluorescence, suggesting that fluorescent magnetosomes could be used during cancer treatments such as magnetic hyperthermia to image cells of interest such as immune or tumor cells.

Dual-core@shell-structured Fe3O4–NaYF4@TiO2 nanocomposites as a magnetic targeting drug carrier for bioimaging and combined chemo-sonodynamic therapy

Dual-core@shell-structured Fe₃O₄–NaYF₄@TiO₂ nanocomposites as a magnetic targeting drug carrier for bioimaging and combined chemo-sonodynamic therapy.

Magnetic core–shell nanoprobe for sensitive killing of cancer cells via induction with a strong external magnetic field

The title system, composed of a highly magnetic core surrounded by a thin arsenite shell, has been synthesized and applied to the magnetically facilitated targeting of anticancer agent (sodium arsenite) at lower dose with minimal side effects and higher efficacy in a biocompatible manner.

Interaction of metal nanoparticles with recombinant arginine kinase from Trypanosoma brucei: thermodynamic and spectrofluorimetric evaluation

BACKGROUND

Trypanosoma brucei, responsible for African sleeping sickness, is a lethal parasite against which there is need for new drug protocols. It is therefore relevant to attack possible biomedical targets with specific preparations and since arginine kinase does not occur in humans but is present in the parasite it becomes a suitable target.

METHODS

Fluorescence quenching, thermodynamic analysis and FRET have shown that arginine kinase from T. brucei interacted with silver or gold nanoparticles.

RESULTS

The enzyme only had one binding site. At 25°C the dissociation (Kd) and Stern-Volmer constants (KSV) were 15.2nM, 0.058nM(-1) [Ag]; and 43.5nM, 0.052nM(-1) [Au] and these decreased to 11.2nM, 0.041nM(-1) [Ag]; and 24.2nM, 0.039nM(-1) [Au] at 30°C illustrating static quenching and the formation of a non-fluorescent fluorophore-nanoparticle complex. Silver nanoparticles bound to arginine kinase with greater affinity, enhanced fluorescence quenching and easier access to tryptophan molecules than gold. Negative ΔH and ΔG values implied that the interaction of both Ag and Au nanoparticles with arginine kinase was spontaneous with electrostatic forces. FRET confirmed that the nanoparticles were bound 2.11nm [Ag] and 2.26nm [Au] from a single surface tryptophan residue.

CONCLUSIONS

The nanoparticles bind close to the arginine substrate through a cysteine residue that controls the electrophilic and nucleophilic characters of the substrate arginine-guanidinium group crucial for enzymatic phosphoryl transfer between ADP and ATP.

GENERAL SIGNIFICANCE

The nanoparticles of silver and gold interact with arginine kinase from T. brucei and may prove to have far reaching consequences in clinical trials.

Interaction of glycine zipper fragments of Aβ-peptides with neuronal nitric oxide synthase: kinetic, thermodynamic and spectrofluorimetric analysis

Five peptide fragments [Aβ(17-21); Aβ(25-29); Aβ(29-33); Aβ(33-37); Aβ(25-37)] of the toxic Aβ(1-40(42)) amyloid peptide were shown to bind with neuronal nitric oxide synthase by means of hydrophobic-hydrophobic forces. The enzyme has a single site for the amyloid peptide binding, which resulted in a quenching of the intrinsic fluorescence of the enzyme. Binding constants determined from Stern-Volmer analysis were between 9×10(-3) and 1.8×10(-2) μM(-1). As temperature increased these binding constants increased reflecting that the interaction of the amyloid peptides with nNOS was endothermic and the quenching was dynamic. Kinetic analysis revealed a non-competitive interaction of the amyloid peptides to the enzyme with inhibitor constants of 5.1 μM for Aβ(17-21) to about 8-12 μM for the other peptides. According to the van't Hoff relationship the thermodynamic parameters, ΔH, ΔS and ΔG for the interaction of the amyloid peptides were all positive and between 41.28 and 77.86 kJ mol(-1)K(-1), 104.92 and 220.82 J mol(-1)K(-1) and 9.92 and 13.13 kJ mol(-1)K(-1), respectively. This suggested that the transition state, created by the amyloid peptide-nNOS complex and generated during the initial stages of Aβ aggregation had to, initially, overcome an activation barrier. Since the ΔG values decreased as temperature increased it not only implied a non-spontaneous interaction but that hydrophobic forces were operative during the binding. By FRET analysis the distance between the donor enzyme and the acceptor amyloid peptide was between 2.7 and 2.8 nm. As the temperature increased from 298 K through 313 K (and higher) the fraction of these tryptophan residues that became exposed increased, to approach a value of 1. There was strong support for the initial interaction being through the glycine zipper regions of Aβ(25-37).

Fluorescence quenching of 4-tert-octylphenol by room temperature ionic liquids and its application

The interactions between room temperature ionic liquids (RTILs) and weak fluorescent chemicals still remain unclear, which hinders the complete and efficient utilization of these "green" solvents in fluorescent analyses of organic chemicals. Herein, we reported the effects of four RTILs, [C8MIM]BF4, [C14MIM]BF4, [C8MIM]PF6 and [C14MIM]PF6, on fluorescence behavior of 4-tert-octylphenol (4-t-OP). In the fortified concentration range of 0.2-1.0 mM, the quenching effects were increased with increasing concentrations of RTILs. However, no obvious variation of peak shape of 4-t-OP was observed in the quenching process, suggesting no formation of ground-state complex between fluorophores in 4-t-OP and quencher (ionic liquids). As for anion effect, the fluorescence quenching efficiency of 4-t-OP by BF4(-) was greater than PF6(-), but the carbon chain length on the imidazolium ring had no significant relationship with fluorescence intensity of 4-t-OP. Both Ksv values (>1.0 × 10(3) L/mol.s) and the different temperature effects demonstrated that the quenching of 4-t-OP by four RTILs was the presence of dynamic and static quenching mechanism. The FI of dansyl chloride within [C8MIM]BF4 increased nearly 5-fold as compared to the control, showing a sensitizing effect on the strong fluorescent chemicals, while a quenching effect on 4-t-OP belonging to weak fluorescent chemicals. The fluorescence-enhanced amplitude of dansyl chloride in [C8MIM]PF6 was greater than [C8MIM]BF4. The fluorescence quenching of 4-t-OP by [C8MIM]PF6 did not belong to FRET phenomenon because of no overlap of emission spectrum of 4-t-OP and absorption spectrum of [C8MIM]PF6. When 0.6 mM [C8MIM]PF6 in acetonitrile was used as the solvent, the detection limit of 4-t-OP was 3.7 μg/L, and the linearity range was 0.01-0.8 mg/L (R(2) = 0.9990). In summary, these results provide a theoretical foundation for the application of RTILs in weak fluorescent chemicals.

One-step synthesis of fluorescein modified nano-carbon for Pd(II) detection via fluorescence quenching

Carbon black (CB) nanoparticles modified with fluorescein, a highly fluorescent molecule, were prepared using a facile and efficient methodology. Simply stirring CB in aqueous solution containing fluorescein resulted in the strong physisorption of fluorescein onto the CB surface. The resulting Fluorescein/CB was then characterised by means of X-ray photoelectron spectroscopy (XPS), cyclic voltammetry (CV), fluorescence microscopy and fluorescence spectroscopy. The optimum experimental conditions for fluorescence of Fluorescein/CB viz. fluorescence excitation and emission wavelengths, O(2) removal and the amount of Fluorescein/CB used, were investigated. The Fluorescein/CB was used as a fluorescent probe for the sensitive detection of Pd(II) in water, based on fluorescence quenching. The results demonstrated that the fluorescence intensity of Fluorescein/CB decreased with increasing Pd(II) concentration, and the fluorescence quenching process could be described by the Stern-Volmer equation. The limit of detection (LOD) for the fluorescence quenching of Fluorescein/CB by Pd(II) in aqueous solution was found to be 1.07 μM (based on 3σ). Last, approaches were studied for the removal of Fe(III) which interferes with the fluorescence quenching of Fluorescein/CB. Complexation of Fe(III) with salicylic acid was used to enhance and control the selectivity of Fluorescein/CB sensor towards Pd(II) in the presence of Fe(III).