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Kiraz AÖ, Koca M, Kurt A, Kara İ, Arıcı C. Synthesis and computational studies on a coumarin derivative: 4-chloromethyl coumarin-7-yl-methacrylate. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.132702] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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2
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Ngcobo M, Nose H, Jayamani A, Ojwach SO. Structural and ethylene oligomerization studies of chelating (imino)phenol Fe( ii), Co( ii) and Ni( ii) complexes: an experimental and theoretical approach. NEW J CHEM 2022. [DOI: 10.1039/d1nj06065a] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Experimental and theoretical data indicate that the stability and metal charge of N^O Fe(ii), Co(ii) and Ni(ii) complexes control their catalytic activities in ethylene oligomerization reactions.
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Affiliation(s)
- Makhosonke Ngcobo
- School of Chemistry and Physics, University of KwaZulu-Natal, Private Bag X01, Scottsville, Pietermaritzburg 3209, South Africa
| | - Holliness Nose
- School of Chemistry and Material Science, Technical University of Kenya, Haile Selasie Avenue, P.O. Box 52428-00200, Nairobi, Kenya
| | - Arumugam Jayamani
- School of Chemistry and Physics, University of KwaZulu-Natal, Private Bag X01, Scottsville, Pietermaritzburg 3209, South Africa
| | - Stephen O. Ojwach
- School of Chemistry and Physics, University of KwaZulu-Natal, Private Bag X01, Scottsville, Pietermaritzburg 3209, South Africa
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3
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Ulaş Y. Synthesis, Spectroscopic Characterization (FT-IR, NMR, UV), NPA, NBO, NLO, Thermochemical Analysis and Molecular Docking Studies of 2-((4-hydroxyphenyl)(piperidin-1-yl)methyl)phenol. JOURNAL OF COMPUTATIONAL BIOPHYSICS AND CHEMISTRY 2021. [DOI: 10.1142/s2737416521500150] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
In this study, a new alkylaminophenol compound was synthesized and characterized by spectroscopic techniques (FT-IR, NMR, UV). The optimized molecular geometry and the vibrational wavenumbers were calculated using density functional theory (DFT) B3LYP/WB97XD and HF methods with 6-311++ G([Formula: see text], [Formula: see text]) basis set. Thus, theoretical data were compared within themselves before comparing with experimental data. The detailed interpretation of the vibrational spectra has been carried out by VEDA program. 1H-NMR and [Formula: see text]C-NMR chemical shifts of the compound were calculated using GIAO/IEFPCM method in CDCl3. Using time-dependent (TD-DFT) approach electronic properties such as HOMO and LUMO energies, the electronic spectrum of the title compound has been studied and reported. Stability of the molecule arising from hyper conjugative interactions, charge delocalization has been analyzed using natural bond orbital (NBO) analysis. Linear polarizability, anisotropic linear polarizability and hyperpolarizability values of the title compound were found to be higher than the values of the pNA compound that are used as a standard substance in the NLO analysis. Molecular electrostatic potential (MEP), the thermodynamic properties (heat capacity, entropy and enthalpy) were calculated. Also, to investigate the biological properties of the title compound, molecular docking was done with DNA(PDB ID: 414D). It has been observed that the effective interaction is hydrogen bonds.
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Affiliation(s)
- Yeliz Ulaş
- Faculty of Art and Science, Department of Chemistry, Bursa Uludag University, Bursa, Turkey
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4
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A DFT Study on the Adsorption of H₂S and SO₂ on Ni Doped MoS₂ Monolayer. NANOMATERIALS 2018; 8:nano8090646. [PMID: 30135410 PMCID: PMC6164490 DOI: 10.3390/nano8090646] [Citation(s) in RCA: 48] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/23/2018] [Revised: 08/08/2018] [Accepted: 08/14/2018] [Indexed: 11/17/2022]
Abstract
In this paper, a Ni-doped MoS₂ monolayer (Ni-MoS₂) has been proposed as a novel gas adsorbent to be used in SF₆-insulated equipment. Based on the first-principles calculation, the adsorption properties of Ni-MoS₂ to SO₂ and H₂S molecules, the main decomposition components of SF₆ under a partial discharge (PD) condition have been studied. The adsorption energy, charge transfer, and structural parameters have been analyzed to find the most stable gas-adsorbed Ni-MoS₂. Furthermore, the density of states (DOS), projected density of states (PDOS), and electron density difference were employed to explore the interaction mechanism between SO₂, H₂S, and the Ni-MoS₂ surface. It is found that the H₂S molecule and SO₂ molecule interact with the Ni-MoS₂ surface by strong adsorption energy. Therefore, we conclude that the interaction between these two kinds of gases and the Ni-MoS₂ monolayer belongs to chemisorption, and the Ni-MoS₂ monolayer might be a promising gas adsorbent for the fault recovery of SF₆-insulated equipment. Additionally, we have to point out that all of the conclusions only considered the final adsorption energy, the barrier in the transition state has not been analyzed in this paper.
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Murugavel S, Sundramoorthy S, Subashini R, Pavan P. Synthesis, characterization, pharmacological, molecular modeling and antimicrobial activity evaluation of novel isomer quinoline derivatives. Struct Chem 2018. [DOI: 10.1007/s11224-018-1149-6] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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6
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Karakus M, Kara I, Çelik Ö, Orujalipoor I, İde S, Yilmaz H. Synthesis, characterization, single crystal structure and theoretical studies of trans-Ni(II)-complex with dithiophosphonate ligand. J Mol Struct 2018. [DOI: 10.1016/j.molstruc.2018.02.110] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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7
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Murugavel S, Sundramoorthy S, Lakshmanan D, Subashini R, Pavan Kumar P. Synthesis, crystal structure analysis, spectral (NMR, FT-IR, FT-Raman and UV–Vis) investigations, molecular docking studies, antimicrobial studies and quantum chemical calculations of a novel 4-chloro-8-methoxyquinoline-2(1H)-one: An effective antimicrobial agent and an inhibition of DNA gyrase and lanosterol-14α-demethylase enzymes. J Mol Struct 2017. [DOI: 10.1016/j.molstruc.2016.11.035] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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8
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Kiraz AÖ, Kara İ, Ak M, Çetişli H, Kolsuz N. Theoretical investigation of triazine based a star shape pyrrole monomer. JOURNAL OF MACROMOLECULAR SCIENCE PART A-PURE AND APPLIED CHEMISTRY 2016. [DOI: 10.1080/10601325.2017.1250310] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Goud EV, Das D, Sivaramakrishna A, Vijayakrishna K, Sabareesh V, Gopakumar G, Brahmmananda Rao C, Lone MY, Jha PC. Investigations on synthesis, coordination behavior and actinide recovery of unexplored dicyclohexylphosphinic acid. Polyhedron 2016. [DOI: 10.1016/j.poly.2016.07.013] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Chidan Kumar CS, Kumar A, Chandraju S. Spectroscopic (FT-IR, (1)H, (13)C NMR and UV-vis) characterization and DFT studies of novel 8-((4-(methylthio)-2,5-diphenylfuran-3-yl)methoxy)quinoline. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2015; 150:602-613. [PMID: 26079516 DOI: 10.1016/j.saa.2015.06.003] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2014] [Revised: 05/30/2015] [Accepted: 06/02/2015] [Indexed: 06/04/2023]
Abstract
In this study, computational calculations of a new quinoline derivative: 8-((4-(methylthio)-2,5-diphenylfuran-3-yl)methoxy)quinoline is carried out using ab initio methods. The geometry optimization as well as fundamental frequencies of the most stable configuration of the title compound is reported. A detailed study of Infrared spectrum, chemical shifts and electronic spectrum of the title compound is also presented. The Gauge-Invariant Atomic Orbital approach is used to calculate the proton and carbon chemical shifts of the title compound. The natural bond orbital analysis of the title compound is also reported in order to understand the stability of the molecule which arises from hyper conjugative interactions and charge delocalization. The theoretical electronic absorption spectrum is also reported using the time dependent density functional approach. The molecular structure along with vibrational frequencies as simulated for binding of iron with the title compound is also reported using ab initio methods.
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Affiliation(s)
- C S Chidan Kumar
- Department of Engineering Chemistry, Alva's Institute of Engineering & Technology, Visvesvaraya Technological University, Mijar, Moodbidri 574225, Karnataka, India.
| | - Ashwani Kumar
- School of Basic Sciences, Indian Institute of Technology Mandi, Mandi, H.P. 175001, India
| | - Siddegowda Chandraju
- Department of Sugar Technology & Chemistry, University of Mysore, Sir M.V. PG Center, Tubinakere 571402, Karnataka, India
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Synthesis, spectroscopic characterization and computational studies of 2-(4-bromophenyl)-2-oxoethyl 3-methylbenzoate by density functional theory. J Mol Struct 2015. [DOI: 10.1016/j.molstruc.2015.03.028] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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12
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Diwaker. Spectroscopic (FT-IR, (1)H, (13)C NMR, UV), DOS and orbital overlap population analysis of copper complex of (E)-4-(2-(4-nitrophenyl) diazenyl)-N, N bis ((pyridin-2-yl) methyl) benzamine by density functional theory. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2015; 136 Pt C:1932-1940. [PMID: 25467688 DOI: 10.1016/j.saa.2014.10.110] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/05/2014] [Revised: 10/14/2014] [Accepted: 10/23/2014] [Indexed: 06/04/2023]
Abstract
The geometric parameters, chemical shifts, FTIR, NMR and orbital overlap population along with DOS (density of states) to know different kinds of interactions for binding of copper atom with (E)-4-(2-(4-nitrophenyl) diazenyl)-N, N bis ((pyridin-2-yl) methyl) benzamine to form its copper complex has been reported by DFT methods. The theoretically predicted values for structural parameters are in agreement with the experimentally reported values. NMR chemical shifts calculated using B3LYP/DFT/GIAO level of theory gives information about binding of copper atom with three nitrogen atoms namely N (3, 8 and 11). Orbital overlap population analysis using DFT/B3LYP/SDD level of theory is used to study the kind of interactions involved in binding of copper with the three nitrogen atoms. DOS studies are done to know about the contribution of alpha, beta electrons to the valence and conduction band. IR spectroscopy investigations gave the absorption bands for the formation of title compound. Electronic spectrum along with HOMO-LUMO energies of the title compound has been investigated using Time-dependent (TD-DFT) approach.
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