Study on Interaction between 5-Bromo-4-thio-2'-deoxyuridine and human serum albumin by spectroscopy and molecular docking

Taurine promotes B-cell activation by interaction with the VH /VL framework regions of B-cell receptor

Taurine (Tau) is a special sulphur-containing amino acid and has been widely used as a dietary supplement. Although Tau exists in lymphocytes in large quantities, the physiological significance of Tau to modulate human immunity is unknown. In the present study, we first found that Tau regulates the B-cell receptor (BCR)-mediated signal transduction and induces the B cells activation. The IgG production of mice after ovalbumin immunization was also increased by Tau administration. Moreover, the isothermal titration calorimetry and surface plasmon resonance analysis have shown that Tau specifically bound to the IgG2a-BCR. The Tau could bind to IgG F(ab')₂ regions via fluorescence spectroscopy analysis. In the molecular docking analysis, Tau bound to the framework regions (FRs) of variable region of the heavy chains (V_H ) and in the light chains (V_L ) of IgG2a-BCR. Our results suggested that Tau could improve the activation of B cells by interaction with the V_H /V_L FRs of BCR.

Extended fluorescent uridine analogues: synthesis, photophysical properties and selective interaction with BSA protein

The improvement in fluorescence properties of 2′-deoxyuridine was made possible by the introduction of (hetero)aromatic moieties at the C–5 position of uridine with alkenyl/phenyl/styryl linkers to create a library of useful fluorescent nucleosides.

Fluorometric determination of quercetin by using graphitic carbon nitride nanoparticles modified with a molecularly imprinted polymer

The authors describe a fluorescent probe for sensitive and selective determination of quercetin, an indicator for the freshness of drinks. The probe consists of silica ball encapsulated graphitic carbon nitride (g-C₃N₄) modified with a molecularly imprinted polymer (MIP). It was synthesized via reverse microemulsion. The resulting MIP@g-C₃N₄ nanocomposite was characterized by fluorescence spectroscopy, transmission electron microscopy, Fourier transform infrared spectroscopy, and X-ray powder diffraction. Quercetin quenches the fluorescence of the MIP@g-C₃N₄ probe. The effect was used to quantify quercetin in grape juice, tea juice, black tea, and red wine by fluorometry (λ_exc = 350 nm, λ_em = 460 nm). Response is linear in the 10-1000 ng mL^-1 quercetin concentration range. The detection limit is 2.5 ng mL^-1, recoveries range between 90.7 and 94.1%, and relative standard deviations are between 2.1 and 5.5%. Graphical abstract Schematic of the synthesis of the MIP@g-C₃N₄ by a reverse microemulsion method. The probe was applied for the selective recognition and fluorometric determination of quercetin.

Interactions of cinnamaldehyde and its metabolite cinnamic acid with human serum albumin and interference of other food additives

Considering the adverse effect of food additives on humans, thorough research of their physiological effects at the molecular level is important. The interactions of cinnamaldehyde (CNMA), a food perfume, and its major metabolite cinnamic acid (CA) with human serum albumin (HSA) were examined by multiple-spectroscopies. NMR analysis revealed CNMA and CA both bound to HSA, and STD-NMR experiments established CNMA and CA primarily interacted with site I and site II of HSA, respectively. The ligands caused strong quenching of HSA fluorescence through a static quenching mechanism, with hydrophobic and electrostatic interaction between CNMA/CA and HSA, respectively. UV-vis absorption and CD results showed ligands induced secondary structure changes of HSA. Binding configurations were proved by docking method. Furthermore, binding constants of CNMA/CA-HSA systems were influenced by the addition of four other food additives. These studies have increased our knowledge regarding the safety and biological action of CNMA and CA.

Binding interaction of phosphorus heterocycles with bovine serum albumin: A biochemical study

Interaction between bovine serum albumin (BSA) and phosphorus heterocycles (PHs) was studied using multi-spectroscopic techniques. The results indicated the high binding affinity of PHs to BSA as it quenches the intrinsic fluorescence of BSA. The experimental data suggested the fluorescence quenching mechanism between PHs and BSA as a dynamic quenching. From the UV–vis studies, the apparent association constant (K_app) was found to be 9.25×10², 1.27×10⁴ and 9.01×10² L/mol for the interaction of BSA with PH-1, PH-2 and PH-3 respectively. According to the Förster's non-radiation energy transfer (FRET) theory, the binding distances between BSA and PHs were calculated. The binding distances (r) of PH-1, PH-2 and PH-3 were found to be 2.86, 3.03, and 5.12 nm, respectively, indicating energy transfer occurs between BSA and PHs. The binding constants of the PHs obtained from the fluorescence quenching data were found to be decreased with increase of temperature. The negative values of the thermodynamic parameters ΔH, ΔS and ΔG at different temperatures revealed that the binding process is spontaneous; hydrogen bonds and van der Waals interaction were the main force to stabilize the complex. The microenvironment of the protein-binding site was studied by synchronous fluorescence and circular dichroism (CD) techniques and data indicated that the conformation of BSA changed in the presence of PHs. Finally, we studied the BSA-PHs docking using Autodock and results suggest that PHs is located in the cleft between the domains of BSA.

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The interaction between BSA and PHs by spectroscopic methods.

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The fluorescence quenching mechanism is dynamic.

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Van der Waals force and hydrogen bond are the main force for BSA-PHs interaction.

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Docking of PHs-BSA interaction.

Molecular interaction of inorganic mercury(ii) with catalase: a spectroscopic study in combination with molecular docking

Interaction of inorganic mercury(ii) with catalase was investigated using spectroscopic methods. Moreover, molecular docking was used to distinguish the interactions between different species of inorganic mercury(ii) and catalase.