Heavy-metal pollution induces changes in the genetic composition and anatomical properties of photobionts in pioneer lichens colonising post-industrial habitats

A first-principles investigation of Cr adsorption on C8 and B4N4 nanocages in aqueous mediums

Heavy metal removal from polluted environments is one of the vital research areas for better and healthier living. In this research, C8 and B4N4 nanocage-like quantum dots are investigated for heavy metal (Cr) removal applications via density functional theory calculations. The adsorption of up to two Cr atoms has been studied in both air and a water medium. The adsorption of Cr atoms results in significant structural deformation of the adsorbents with a high adsorption energy of -8.74 and -5.77 eV for C8 and B4N4 nanostructures, respectively, which is further increased with an increasing number of Cr atoms. All adsorbents and complex structures showed real vibrational frequencies. Mulliken charge and electrostatic potential analysis reveal a significant charge transfer between adsorbate-adsorbent. The adsorption process causes a decrease in the energy gap of the adsorbents. All the reactions in this study were spontaneous and thermodynamically ordered. QTAIM analysis verifies that the interactions of the adsorbents with Cr atoms are strong partial covalent. The study's findings make C8 and B4N4 nanostructures potential candidates for Cr-detection and removal applications.

Do urban air pollutants induce changes in the thallus anatomy and affect the photosynthetic efficiency of the nitrophilous lichen Physcia adscendens?

Lichens are symbiotic organisms that are generally sensitive to air pollution due to their specific biological and physiological features. Physcia adscendens is a nitrophilous lichen well-known for being resistant to air pollution associated with progressive anthropopressure. The aim of this study was to investigate the effect of nitrogen oxides and suspended particulate matter (PM10 and PM2.5) on anatomical structure of the thallus and photobiont's photosynthetic efficiency in P. adscendens inhabiting sites that differ in terms of air pollution level and thereby to determine the relevance of these pollutants for shaping the structure of the thallus and the physiological condition of the photosynthetic partner. We found that P. adscendens from polluted sites had increased thickness of the algal layer and the larger size of the algae cells, but a much lower ratio of the algal layer to the whole thallus. Lichens from highly polluted sites had also higher photosynthetic efficiency, which indicates a relatively good physiological condition of the photobiont. This indicates that the photobiont of P. adscendens is well-adapted to function under air pollution stress which may contribute to its success in colonizing polluted sites. Both changes in the anatomy of the lichen thallus and the efficiency of photosynthesis may be related to the enrichment of the environment with nitrogen. The increased photosynthetic efficiency as well as investment in the size of photobiont cells and growth mycobiont hyphae confirms that P. adscendens is well-adapted to urban conditions; however, the mechanism behind those adaptations needs more focus in the context of global environmental changes.

Ab initio calculation of the adsorption of As, Cd, Cr, and Hg heavy metal atoms onto the illite(001) surface: Implications for soil pollution and reclamation

Elucidating the mechanisms of heavy metal (HM) adsorption on clay minerals is key to solving HM pollution in soil. In this study, the adsorption of four HM atoms (As, Cd, Cr, and Hg) on the illite(001) surface was investigated using density functional theory calculations. Different adsorption configurations were investigated and the electronic properties (i.e., adsorption energy (E_ad) and electron transfer) were analyzed. The E_ad values of the four HM atoms on the illite(001) surface were found to be As > Cr > Cd > Hg. The E_ad values for the most stable adsorption configurations of As, Cr, Cd, and Hg were -1.8554, -0.7982, -0.3358, and -0.2678 eV, respectively. The As atoms show effective chemisorption at all six adsorption sites, while Cd, Cr, and Hg atoms mainly exhibited physisorption. The hollow and top (O) sites were more favorable than the top (K) sites for the adsorption of HM atoms. The Gibbs free energy results show that the illite(001) surface was energetically favorable for the adsorption of As and Cr atoms under the influence of 298 K and 1 atm. After adsorption, there was a redistribution of positions and reconfiguration of the chemical bonding of the surface atoms, with a non-negligible influence around the upper surface atoms. Bader charge analysis shows electrons were transferred from the surface to the HM atoms, and a strong correlation between the valence electron variations and the adsorption energy was observed. HM atoms had a high electronic state overlap with the surface O atoms near the Fermi energy level, indicating that the surface O atoms, though not the topmost atoms around the surface, significantly influence HM adsorption. The above results show illite(001) preferentially adsorbed As among all four investigated HM atoms, indicating that soils containing a high proportion of illite might be more prone to As pollution.

Biocrust diazotrophs and bacteria rather than fungi are sensitive to chronic low N deposition

Anthropogenic long-term nitrogen (N) deposition may dramatically impact biocrusts due to the overarching N limitation of soil biota in deserts. Even low levels of N may reach a critical loading threshold altering biocrust constituents and function. To identify the impact of chronic and continuous low levels of N deposition on biocrusts, we created a realistic gradient mirroring anthropogenic N addition rate (2:1 NH₄ ⁺ : NO₃ ^- rates: 0.3, 0.5, 1.0, 1.5, 3 g N m^-2  yr^-1 ) and measured the response of bacteria and fungi within cyanobacterial-dominated biocrusts over 8 years in a temperate desert, the Gurbantunggut Desert, China. We found that once N deposition reached 1.5 g N m^-2  yr^-1 biocrust bacterial communities, including diazotrophs, were altered while no such tipping point existed for fungi. Above the threshold, bacterial richness was enhanced, the relative abundance of Chloroflexi, FBP and Gemmatimonadetes was elevated, and diazotrophs shifted from being dominated by Nostocaceae and Scytonemataceae (Cyanobacteria) to free-living Bradyrhizobiaceae (Alphaproteobacteria). Alternatively, the relative recovery of a few fungal species within the Lecanorales, Pleosporales and Verrucariales became either enriched or diminished due to N deposition. The chronic addition of N resulted in a dense and interconnected bacterial co-occurrence network that accentuated a functional shift from networks dominated by phototrophic species within the Nostocaceae, Xenococcaceae, Phormidiaceae and Scytonemataceae (Cyanobacteria) to ammonia-oxidizing species within the Nitrosomonadaceae (Betaproteobacteria) and nitrifying bacteria [i.e. Nitrospiraceae (Nitrospirae)]. Based on structural equation models, the effects of N additions on biocrust constituents were imposed through indirect effects on pH, soil electrical conductivity and ammonium concentrations. In summary, biocrust constituents are generally insensitive to chronic low levels of N depositions until rates reach above 1.5 g N m^-2  yr^-1 with diazotrophs being the most sensitive biocrust constituents followed by bacteria and finally fungi. Ultimately once the threshold is reached N deposition favours biocrust constituents utilizing inorganic N and other C sources over relying on phototrophic and/or N-fixing cyanobacteria for C and N.

Promiscuity in Lichens Follows Clear Rules: Partner Switching in Cladonia Is Regulated by Climatic Factors and Soil Chemistry

Climatic factors, soil chemistry and geography are considered as major factors affecting lichen distribution and diversity. To determine how these factors limit or support the associations between the symbiotic partners, we revise the lichen symbiosis as a network of relationships here. More than one thousand thalli of terricolous Cladonia lichens were collected at sites with a wide range of soil chemical properties from seven biogeographical regions of Europe. A total of 18 OTUs of the algal genus Asterochloris and 181 OTUs of Cladonia mycobiont were identified. We displayed all realized pairwise mycobiont-photobiont relationships and performed modularity analysis. It revealed four virtually separated modules of cooperating OTUs. The modules differed in mean annual temperature, isothermality, precipitation, evapotranspiration, soil pH, nitrogen, and carbon contents. Photobiont switching was strictly limited to algae from one module, i.e., algae of similar ecological preferences, and only few mycobionts were able to cooperate with photobionts from different modules. Thus, Cladonia mycobionts generally cannot widen their ecological niches through photobiont switching. The modules also differed in the functional traits of the mycobionts, e.g., sexual reproduction rate, presence of soredia, and thallus type. These traits may represent adaptations to the environmental conditions that drive the differentiation of the modules. In conclusion, the promiscuity in Cladonia mycobionts is strictly limited by climatic factors and soil chemistry.

Recycling of Blast Furnace and Coal Slags in Aided Phytostabilisation of Soils Highly Polluted with Heavy Metals

(1) Background: The growing demand for developing new methods of degraded land remediation is linked to the need to improve the soil environment, including post-industrial soils. Biological methods such as the aided phytostabilisation technique are the most common methods applied to achieve effective remediation. This study aimed to determine the technical potential of methods using novel or yet not used soil amendments, such as blast furnace slag (BFS) and coal slag (CS), with Dactylis glomerata L. as a test plant. (2) Methods: The experiment was conducted on post-industrial area soil with high concentrations of Cu (761 mg/kg), Cd (23.9 mg/kg), Pb (13,539 mg/kg) and Zn (8683 mg/kg). The heavy metal content in roots and the above-ground parts of plants and soil was determined by flame atomic absorption spectrometry. (3) Results: The addition of BFS to the soil was the most effective in increasing Dactylis glomerata L. biomass yield. The Cu, Cd, Pb, and Zn concentrations were higher in the roots than in the above-ground parts of the plants. BFS and CS induced a considerable increase in soil pH, compared to the control treatment. The addition of BFS also produced the greatest significant decrease in the Pb content in soil following the phytostabilisation process. (4) Conclusions: In view of the above, the use of BFS in the aided phytostabilisation in soils contaminated with high levels of Cu, Cd, Pb, and Zn can be recommended for larger-scale in situ projects.

Tree decay modulates the functional response of lichen communities in Patagonian temperate forests

Epiphytic and epixylic lichens respond negatively to forest degradation, climate change and pollution, but those effects may depend on functional traits or interact with the stage of tree decay. Disentangling the main drivers of lichen communities remains a challenge in regions where lichens are diverse and poorly known, as the case of Patagonian temperate forests. We used a multi-scale approach to evaluate the relationship between environmental variables, tree decay stage and lichens. We sampled lichens across three increasing scales (tree ≪ site ≪ landscape) by selecting 19 landscape units, where trees in four decay stages (snags, logs, cavity trees and healthy trees) were selected within sampling plots. A total of 35 predictors were measured over different scales, including 25 remote sensing indices of forest conditions, climate and air pollutants. Structural Equation Models were used to test the causal linkages of predictors with lichens, distinguishing functional categories (size, growth and reproductive strategy). A total of 69 lichen species were recorded. Cavity trees and logs supported the largest diversity, while snags and healthy trees had the lowest diversity. Functional lichen groups responded differently to fine-scale variables, including the diameter, height, density and pH of trees. Air pollutants affected species with sexual and mixed strategies. Lichens were sensitive to precipitation, temperature and wind speed, with foliose and sexual species responding positively to the latter. The abundance of all species and macrolichens increased with tree senescence and decreased with canopy continuity. Lichens occupying snags and logs responded negatively to primary productivity and tree senescence, but positively to soil organic matter. Our findings suggest: i) the functional structure of lichen communities varies non-linearly with the wood decay process; ii) the reproductive strategy influences the sensitivity to air pollutants, iii) climate variables influence dispersal and colonization of woody substrates; and iv) forest structure/succession interacts with tree decay.