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Lhotáková Z, Neuwirthová E, Potůčková M, Červená L, Hunt L, Kupková L, Lukeš P, Campbell P, Albrechtová J. Mind the leaf anatomy while taking ground truth with portable chlorophyll meters. Sci Rep 2025; 15:1855. [PMID: 39805920 PMCID: PMC11730753 DOI: 10.1038/s41598-024-84052-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2024] [Accepted: 12/19/2024] [Indexed: 01/16/2025] Open
Abstract
A wide range of portable chlorophyll meters are increasingly being used to measure leaf chlorophyll content as an indicator of plant performance, providing reference data for remote sensing studies. We tested the effect of leaf anatomy on the relationship between optical assessments of chlorophyll (Chl) against biochemically determined Chl content as a reference. Optical Chl assessments included measurements taken by four chlorophyll meters: three transmittance-based (SPAD-502, Dualex-4 Scientific, and MultispeQ 2.0), one fluorescence-based (CCM-300), and vegetation indices calculated from the 400-2500 nm leaf reflectance acquired using an ASD FieldSpec and a contact plant probe. Three leaf types with different anatomy were included: dorsiventral laminar leaves, grass leaves, and needles. On laminar leaves, all instruments performed well for chlorophyll content estimation (R2 > 0.80, nRMSE < 15%), regardless of the variation in their specific internal structure (mesomorphic, scleromorphic, or scleromorphic with hypodermis), similarly to the performance of four reflectance indices (R2 > 0.90, nRMSE < 16%). For grasses, the model to predict chlorophyll content across multiple species had low performance with CCM-300 (R2 = 0.45, nRMSE = 11%) and failed for SPAD. For Norway spruce needles, the relation of CCM-300 values to chlorophyll content was also weak (R2 = 0.45, nRMSE = 11%). To improve the accuracy of data used for remote sensing algorithm development, we recommend calibration of chlorophyll meter measurements with biochemical assessments, especially for species with anatomy other than laminar dicot leaves. The take-home message is that portable chlorophyll meters perform well for laminar leaves and grasses with wider leaves, however, their accuracy is limited for conifer needles and narrow grass leaves. Species-specific calibrations are necessary to account for anatomical variations, and adjustments in sampling protocols may be required to improve measurement reliability.
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Affiliation(s)
- Zuzana Lhotáková
- Department of Plant Experimental Biology, Faculty of Science, Charles University, Viničná 5, 12800, Prague, Czech Republic.
| | - Eva Neuwirthová
- Department of Plant Experimental Biology, Faculty of Science, Charles University, Viničná 5, 12800, Prague, Czech Republic
| | - Markéta Potůčková
- Department of Applied Geoinformatics and Cartography, Faculty of Science, Charles University, Albertov 6, 12800, Prague, Czech Republic
| | - Lucie Červená
- Department of Applied Geoinformatics and Cartography, Faculty of Science, Charles University, Albertov 6, 12800, Prague, Czech Republic
| | - Lena Hunt
- Department of Plant Experimental Biology, Faculty of Science, Charles University, Viničná 5, 12800, Prague, Czech Republic
| | - Lucie Kupková
- Department of Applied Geoinformatics and Cartography, Faculty of Science, Charles University, Albertov 6, 12800, Prague, Czech Republic
| | - Petr Lukeš
- Global Change Research Institute of the Czech Academy of Sciences, Bělidla 986/4a, 60300, Brno, Czech Republic
| | - Petya Campbell
- University of Maryland Baltimore County and NASA/Goddard Space Flight Center, Code 618, Greenbelt, MD, 20771, USA
| | - Jana Albrechtová
- Department of Plant Experimental Biology, Faculty of Science, Charles University, Viničná 5, 12800, Prague, Czech Republic
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Shi T, Fan D, Xu C, Zheng G, Zhong C, Feng F, Chow WS. The Fitting of the OJ Phase of Chlorophyll Fluorescence Induction Based on an Analytical Solution and Its Application in Urban Heat Island Research. PLANTS (BASEL, SWITZERLAND) 2024; 13:452. [PMID: 38337985 PMCID: PMC10857409 DOI: 10.3390/plants13030452] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/29/2023] [Revised: 01/28/2024] [Accepted: 02/01/2024] [Indexed: 02/12/2024]
Abstract
Chlorophyll (Chl) fluorescence induction (FI) upon a dark-light transition has been widely analyzed to derive information on initial events of energy conversion and electron transfer in photosystem II (PSII). However, currently, there is no analytical solution to the differential equation of QA reduction kinetics, raising a doubt about the fitting of FI by numerical iteration solution. We derived an analytical solution to fit the OJ phase of FI, thereby yielding estimates of three parameters: the functional absorption cross-section of PSII (σPSII), a probability parameter that describes the connectivity among PSII complexes (p), and the rate coefficient for QA- oxidation (kox). We found that σPSII, p, and kox exhibited dynamic changes during the transition from O to J. We postulated that in high excitation light, some other energy dissipation pathways may vastly outcompete against excitation energy transfer from a closed PSII trap to an open PSII, thereby giving the impression that connectivity seemingly does not exist. We also conducted a case study on the urban heat island effect on the heat stability of PSII using our method and showed that higher-temperature-acclimated leaves had a greater σPSII, lower kox, and a tendency of lower p towards more shade-type characteristics.
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Affiliation(s)
- Tongxin Shi
- The Key Laboratory for Silviculture and Conservation of Ministry of Education, College of Forestry, Beijing Forestry University, Beijing 100083, China; (T.S.)
| | - Dayong Fan
- The Key Laboratory for Silviculture and Conservation of Ministry of Education, College of Forestry, Beijing Forestry University, Beijing 100083, China; (T.S.)
| | - Chengyang Xu
- The Key Laboratory for Silviculture and Conservation of Ministry of Education, College of Forestry, Beijing Forestry University, Beijing 100083, China; (T.S.)
| | - Guoming Zheng
- Yi Zong Qi Technology (Beijing) Co., Ltd., Beijing 100095, China
| | - Chuanfei Zhong
- Institute of Forestry and Pomology, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100093, China
| | - Fei Feng
- The Key Laboratory for Silviculture and Conservation of Ministry of Education, College of Forestry, Beijing Forestry University, Beijing 100083, China; (T.S.)
| | - Wah Soon Chow
- Division of Plant Sciences, Research School of Biology, The Australian National University, Acton, ACT 2601, Australia
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Alonzo M, Baker ME, Caplan JS, Williams A, Elmore AJ. Canopy composition drives variability in urban growing season length more than the heat island effect. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 884:163818. [PMID: 37121316 DOI: 10.1016/j.scitotenv.2023.163818] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/16/2023] [Revised: 04/24/2023] [Accepted: 04/25/2023] [Indexed: 05/06/2023]
Abstract
The elevated heat of urban areas compared to their surroundings makes humid temperate cities a useful preview of future climate effects on natural forest phenology. The utility of this proxy rests on the expectation that trees in urban areas alter their phenology in response to warmer site conditions in spring and fall. However, it is possible that apparent lengthening of the growing season is instead governed by human-driven tree species selection and plant functional type (PFT; trees, shrubs, turfgrass) heterogeneity typical of managed landscapes. Without the use of highly spatially and temporally resolved remote sensing data, the roles of tree taxonomy and local site characteristics (e.g., impervious cover) in controlling phenology remain confounded. To understand the drivers of earlier start of season (SOS) and later end of season (EOS) among urban trees, we estimated individual tree phenology using >130 high-resolution satellite images per year (2018-2020) for ~10,000 species-labeled trees in Washington, DC. We found that species identity alone accounted for 4× more variability in the timing of SOS and EOS compared with a tree's planting location characteristics. Additionally, the urban mix of PFTs may be more responsible for apparent advances in SOS (by between 1.8 ± 1.3 and 3.5 ± 1.3 days) than heat per se. The results of this study caution against associating longer growing seasons in cities-observed in moderate to coarse resolution remote sensing imagery-to within-species phenological plasticity and demonstrate the power of high-resolution satellite data for tracking tree phenology in biodiverse environments.
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Affiliation(s)
- Michael Alonzo
- Department of Environmental Science, American University, Washington, DC 20016, USA.
| | - Matthew E Baker
- Department of Geography & Environmental Systems, University of Maryland, Baltimore County, Baltimore, MD 21250, USA
| | - Joshua S Caplan
- Department of Architecture and Environmental Design, Temple University, Ambler, PA 19002, USA
| | - Avery Williams
- Department of Environmental Science, American University, Washington, DC 20016, USA
| | - Andrew J Elmore
- Appalachian Laboratory, University of Maryland Center for Environmental Science, Frostburg, MD 21532, USA
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