Biogeochemical Fe(II) generators as a new strategy for limiting Cd uptake by rice and its implication for agricultural sustainability

Use of diffusive gradients in thin-film technique to predict the mobility and transfer of nutrients and toxic elements from agricultural soil to crops-an overview of recent studies

The purpose of this review was to survey the recent applications of the diffusive gradients in thin films (DGT) technique in the assessment of mobility and bioavailability of nutrients and potentially toxic elements (PTEs) in agricultural soil. Many studies compared the capabilities of the DGT technique with those of classical soil chemical extractants used in single or sequential procedures to predict nutrients and PTE bioavailability to crops. In most of the published works, the DGT technique was reported to be superior to the conventional chemical extraction and fractionation methods in obtaining significant correlations with the metals and metalloids accumulated in crops. In the domain of nutrient bioavailability assessment, DGT-based studies focused mainly on phosphorous and selenium labile fraction measurement, but potassium, manganese, and nitrogen were also studied using the DGT tool. Different DGT configurations are reported, using binding and diffusive layers specific for certain analytes (Hg, P, and Se) or gels with wider applicability, such as Chelex-based binding gels for metal cations and ferrihydrite-based hydrogels for oxyanions. Overall, the literature demonstrates that the DGT technique is relevant for the evaluation of metal and nutrient bioavailability to crops, due to its capacity to mimic the plant root uptake process, which justifies future improvement efforts.

Multitask Deep Learning Enabling a Synergy for Cadmium and Methane Mitigation with Biochar Amendments in Paddy Soils

Biochar has demonstrated significant promise in addressing heavy metal contamination and methane (CH4) emissions in paddy soils; however, achieving a synergy between these two goals is challenging due to various variables, including the characteristics of biochar and soil properties that influence biochar's performance. Here, we successfully developed an interpretable multitask deep learning (MTDL) model by employing a tensor tracking paradigm to facilitate parameter sharing between two separate data sets, enabling a synergy between Cd and CH4 mitigation with biochar amendments. The characteristics of biochar contribute similar weightings of 67.9% and 62.5% to Cd and CH4 mitigation, respectively, but their relative importance in determining biochar's performance varies significantly. Notably, this MTDL model excels in custom-tailoring biochar to synergistically mitigate Cd and CH4 in paddy soils across a wide geographic range, surpassing traditional machine learning models. Our findings deepen our understanding of the interactive effects of Cd and CH4 mitigation with biochar amendments in paddy soils, and they also potentially extend the application of artificial intelligence in sustainable environmental remediation, especially when dealing with multiple objectives.

Application of Diffusive Gradients in Thin-films (DGT) for assessing the heavy metals mobility in soil and prediction of their transfer to Russula virescens

Although edible mushrooms are considered a source of many beneficial nutrients for human, they can also represent a risk to health due to their capacity to accumulate heavy metals. In this study, the total dissolved in soil solution and labile concentrations of heavy metals (Cd, Pb, Cu, Zn, Co, Cr, Mn, Ni, and Fe) in soil were measured and correlated with their concentrations accumulated in Russula virescens wild mushrooms. The diffusive gradient in thin films (DGT) technique was used to measure the labile metals content in the soil (CDGT), and corroborated with the metals concentrations in soil solution (Csoln) was used to calculate an R-value, which can estimate the metals resupply from soil solid phase when they are uptake by mushroom. The DGT-labile metal concentrations decreased in the order Mn > Fe > Zn > Cu > Co > Ni > Cd ≅ Pb > Cr. The R-values, calculated as the ratio between CDGT and Csoln decreased in the order: Cd (0.50) > Zn (0.37) > Pb (0.33) > Cu (0.24) ≅ Ni (0.24) ≅ Co (0.23) > Mn (0.16) > Fe (0.12) > Cr (0.04). For the first time, we compared the R-values with the bioaccumulation factors (BAFs) in mushrooms, and it was observed that, a similar increasing trend of BAFs with the R-values exists, thus the capacity of the soil solid phase to fast re-supply metals to soil solution increases BAFs. Although the soil samples were not contaminated with heavy metals above the legislative limits, the concentrations of heavy metals accumulated in mushrooms were high enough to pose risks for humans, mainly for children, due to their Cu content.

Soil moisture dynamics regulates the release rates and lability of copper in contaminated paddy soils

The climate changes have caused more extreme precipitation and drought events in the field and have exacerbated the severity of wet-dry events in soils, which will inevitably lead to severe fluctuations in soil moisture content. Soil moisture content has been recognized to influence the distribution of heavy metals, but how temporal changes of soil moisture dynamics affect the release rates and lability of heavy metals is still poorly understood, which precludes accurate prediction of environmental behavior and environmental risk of heavy metals in the field. In this study, we combined experimental and modeling approaches to quantify copper release rates and labile copper fractions in two paddy soils from southern China under different moisture conditions. Our kinetic data and models showed that the release rates and lability of copper were highly associated with the soil moisture contents, in which, surprisingly, high soil moisture contents effectively reduced the release rates of copper even with little changes in the reactive portions of copper in soils. A suite of comprehensive characterization on soil solid and solution components along the incubation suggested that soil microbes may regulate soil copper lability through forming microbially derived organic matter that sequestered copper and by increasing soil particle aggregation for protecting copper from release. This study highlights the importance of incorporating soil moisture dynamics into future environmental models. The experimental and modeling approaches in this study have provided basis for further developing predictive models applicable to paddy soils with varying soil moisture under the impact of climate change.

Stable Isotope Ratios Trace the Rice Uptake of Cadmium from Atmospheric Deposition via Leaves and Roots

Cadmium (Cd) stable isotopes provide a novel technique to investigate the fate of Cd in the environment, but challenges exist for tracing the sources in the plants. We performed individual rice leaf and root exposures to dry and wet deposition using customized open-top chambers (OTCs) in the greenhouse and in the field next to a smelter, respectively. The field experiment also included a control without Cd deposition and a "full" treatment. The exposure experiments and isotope signatures showed that leaves can directly take up atmospheric Cd and then translocate within rice plants to other tissues, contributing 52-70% of Cd in grains, which exceeded the contribution (30-48%) by root exposure. The Cd isotopes in leaves, nodes, internodes, and grains demonstrate that roots preferentially take up Cd from wet deposition, but leaves favor uptake of Cd from dry deposition. The Cd uptake by leaves is redistributed via nodes, allowing for upward transport to the grains but preventing downward transport to the roots. Leaves favor uptake of heavy isotopes from atmospheric deposition (ΔCd114/110Leaf-Dust: 0.10 ± 0.02‰) but retain light isotopes and transport heavy isotopes to the nodes and further to grains. These findings highlight the contribution of atmospheric deposition to rice and Cd isotopes as a useful tracer for quantifying sources in plants when different isotopic compositions are in sources.

Bioremediation of PBDEs and heavy metals co-contaminated soil in e-waste dismantling sites by Pseudomonas plecoglossicida assisted with biochar

Biochar-assisted microbial remediation has been proposed as a promising strategy to eliminate environmental pollutants. However, studies on this strategy used in the remediation of persistent organic pollutants and heavy metals co-contaminated soil are lacking, and the effect of the combined incorporation of biochar and inoculant on the assembly, functions, and microbial interactions of soil microbiomes are unclear. Here, we studied 2,2',4,4'-tetrabrominated diphenyl ether (BDE-47) degradation and heavy metal immobilization by and biochar-based bacterial inoculant (BC/PP) in an e-waste contaminated soil, and corresponding microbial regulation mechanisms. Results showed that BC/PP addition was more effective in reducing Cu and Pb availability and degrading BDE-47 than inoculant alone. Notably, BC/PP facilitated bound-residue formation of BDE-47, reducing the ecological risk of residual BDE-47. Meanwhile, microbial carbon metabolism and enzyme activities (related to C-, N-, and P- cycles) were enhanced in soil amended with BC/PP. Importantly, biochar played a crucial role in inoculant colonization, community assembly processes, and microbiome multifunction. In the presence of biochar, positive interactions in co-occurrence networks of the bacterial community were more frequent, and higher network stability and more keystone taxa were observed (including potential degraders). These findings provide a promising strategy for decontaminating complex-polluted environments and recovering soil ecological functions.

Oxidative compensation mechanism of Fe-S synergetic inhibition of Cd activity in paddy field during flooding and drainage

It is known that the transformation of Fe and S forms in soil affects the migration and activity of Cd, but the coordinated regulation of Cd activity by Fe and S under different redox conditions is still unclear. Here, Diffusive gradients in thin films (DGT), an in-situ monitoring technique, is used to explore the difference of the regulation of Cd activity in paddy fields with ferrihydrite (FH) and ferrihydrite coprecipitated by sulfate (FH-S) under the flooding and drainage conditions. The addition of FH-S and FH significantly reduced the activity of Cd (Dissolved, Exchanged, and CDGT-Cd). Compared with pure FH, the adsorption extent of Cd in FH was enhanced by increasing concentrations of SO42- (i.e., S/Fe ratio), which is attributed to the decrease in the crystallinity of FH by sulfate. During soil flooding, the addition of FH-S promoted the production of metal sulfide (CdS and FeS/FeS2). The activity of Cd increased after drainage, while the FH-S treatment groups delayed the release of Cd. After 30 days of drainage, the concentration of Cd in FH-S treatment groups decreased by 28.9-44.1 % compared with the control group. The fresh FeS/FeS2 is not the main adsorbent for fixing Cd, and due to the existence of oxidation compensation mechanism, the preferential oxidation of FeS/FeS2 delays the release of Cd in the drainage stage. Our study shed new light on the mechanism of Fe-S synergistic regulation of Cd and remediation of Cd-contaminated soils.

Biochar-immobilized Bacillus spp. for heavy metals bioremediation: A review on immobilization techniques, bioremediation mechanisms and effects on soil

Heavy metals contamination present risks to ecosystems and human health. Bioremediation is a technology that has been applied to minimize the levels of heavy metals contamination. However, the efficiency of this process varies according to several biotic and abiotic aspects, especially in environments with high concentrations of heavy metals. Therefore, microorganisms immobilization in different materials, such as biochar, emerges as an alternative to alleviate the stress that heavy metals have on microorganisms and thus improve the bioremediation efficiency. In this context, this review aimed to compile recent advances in the use of biochar as a carrier of bacteria, specifically Bacillus spp., with subsequent application for the bioremediation of soil contaminated with heavy metals. We present three different techniques to immobilize Bacillus spp. on biochar. Bacillus strains are capable of reducing the toxicity and bioavailability of metals, while biochar is a material that serves as a shelter for microorganisms and also contributes to bioremediation through the adsorption of contaminants. Thus, there is a synergistic effect between Bacillus spp. and biochar for the heavy metals bioremediation. Biomineralization, biosorption, bioreduction, bioaccumulation and adsorption are the mechanisms involved in this process. The application of biochar-immobilized Bacillus strains results in beneficial effects on the contaminated soil, such as the reduction of toxicity and accumulation of metals in plants, favoring their growth, in addition to increasing microbial and enzymatic activity in soil. However, competition and reduction of microbial diversity and the toxic characteristics of biochar are reported as negative impacts of this strategy. More studies using this emerging technology are essential to improve its efficiency, to elucidate the mechanisms and to balance positive and negative impacts, especially at the field scale.

Machine learning method for predicting cadmium concentrations in rice near an active copper smelter based on chemical mass balance

Identification the sources of heavy metals can effectively control and prevent agricultural soil pollution. Here we performed a three-year mass balance study along a gradient of soil pollution near a smelter to quantify the potential contribution and net cadmium (Cd) fluxes and predict Cd concentration in rice grains by multiple regression (MR) and back propagation (BP) neural network. The Cd inputs were mainly from the irrigation water (54.6-60.8%) in the moderately polluted and background sites but from atmospheric deposition (90.9%) in the highly polluted site. The Cd outputs were mainly from the surface runoff (55.8-59.5%) in the moderately polluted and background sites, but from Sedum plumbizincicola phytoextraction (83.6%) in the highly polluted site. The soil Cd concentrations, the annual fluxes of atmospheric deposition, pesticides and fertilizers, irrigation water, surface runoff, and leaching water were selected as the dependent factors to predict Cd concentrations in rice grains. The genetic algorithms (GA)-BP neural network model gives the best prediction accuracy compared to the BP neural network model and multivariate regression analysis. The major implication is that the health risks through the consumption of rice can be rapidly assessed based on the Cd concentrations in rice grains predicted by the model.

Spatial and Temporal Variations of Heavy Metals' Bioavailability in Soils Regulated by a Combined Material of Calcium Sulfate and Ferric Oxide

Heavy metal pollution in soils threatens food safety and human health. Calcium sulfate and ferric oxide are commonly used to immobilize heavy metals in soils. However, the spatial and temporal variations of the heavy metals' bioavailability in soils regulated by a combined material of calcium sulfate and ferric oxide (CSF) remain unclear. In this work, two soil column experiments were conducted to investigate the spatial and temporal variations of CSF immobilized Cd, Pb, and As. In the horizontal soil column, the results showed that CSF's immobilization range for Cd increased over time, and adding CSF in the center of the soil column decreased the concentrations of bioavailable Cd significantly, up to 8 cm away by day 100. The CSF immobilization effect on Pb and As only existed in the center of the soil column. The CSF's immobilization depths for Cd and Pb in the vertical soil column increased over time and extended to 20 cm deep by day 100. However, the CSF's immobilization depths for As only extended to between 5 and 10 cm deep after 100 days of incubation. Overall, the results from this study can serve as a guide to determine the CSF application frequency and spacing distance for the in-situ immobilization of heavy metals in soils.

Humic acid and fulvic acid facilitate the formation of vivianite and the transformation of cadmium via microbially-mediated iron reduction

The effects of humic acids (HA) and fulvic acids (FA) on the fate of Cd in anaerobic environment upon microbial reduction of Cd-bearing ferrihydrite (Fh) with Geobacter metallireducens were investigated. The results showed that HA and FA could promote the reductive dissolution of Fh and the formation of vivianite. After incubation of 38 d, vivianite accounted for 47.19%, 59.22%, and 48.53% of total Fe in biological control batch (BCK), HA and FA batches (C/Fe molar ratio of 1.0), respectively, by Mössbauer spectroscopy analysis. In terms of Cd, HA and FA could promote the release of adsorbed Cd during the initial bioreduction process, but reassuringly, after 38 d the dissolved Cd with HA and FA addition batches were 0.58-0.91 and 0.99-1.08 times of the BCK, respectively. The proportions of residual Cd in HA batches were higher than FA and BCK batches, indicating that HA was better than FA in immobilizing Cd. This might be because the quinone groups in HA could act as electron shuttle. This study showed that HA facilitated the transformation of vivianite better than FA, and Cd can be stabilized by resorption or co-precipitation with vivianite, providing a theoretical support for the translocation of Cd in sediment-water interface.

First-principle study on the stability of Cd passivates in soil

The stable existence of heavy metals in soil under natural conditions is the core issue in heavy metal pollution solidification and remediation technology. However, the existing research is limited to soil passivation tests of different materials or biochar adsorption tests and cannot reveal the internal mechanism of functional groups of different compounds in soil passivation. This paper takes the common heavy metal ion Cd2+ as an example to analyze the stability of the combination of heavy metal ions and common ion groups in soil. The stability and existing form of Cd are analyzed by using first-principle calculations, and the free energy, band structure, and partial density of states of CdCO3, CdSO4, CdCl2, and CdSiO3 are computed. The stability of Cd binding to common anions in soil is determined. Results show the descending order of structural stability of cadmium compounds is CdSiO3, CdSO4, CdCO3, and CdCl2. SO42- and SiO32- can be used as preferred functional groups for cadmium pollution passivation. Anhydrous sodium sulfate and sodium silicate are promising passivators.

A chrysotile-based Fe/Ti nanoreactor enables efficient arsenic capture for sustainable environmental remediation

Iron-based materials for arsenic (As) immobilization in practical groundwater and soil remediation suffer from a low removal capacity and an insufficient long-term stability. Herein, a unique chrysotile-based nanoreactor has been developed by incorporating iron/titanium oxides into the cylindrical cavity of chrysotile (TiFe-Chy), providing sufficient internal reaction sites for As immobilization. Results reveal that the adsorption capacities of TiFe-Chy for As(III) and As(V) are considerably higher than the commonly used amendments, i.e., layered double hydroxide (LDH) and Phoslock®, respectively. More importantly, TiFe-Chy exhibits a strong anti-interference capability of As immobilization in soils compared to those commercial products due to this unique incorporation approach. Fixed-bed leaching experiments indciate that this TiFe-Chy nanoreactor can efficiently decrase the As(III) and As(V) concentrations by 81.8-87.3% within a period of ten years, significantly improving the long-term stability of As immobilization in soils. Life cycle assessment analysis reveals that TiFe-Chy can reduce negative environmental impacts (such as carbon emissions), resulting in a low cost for soils and groundwater remediation. The findings of this work open a new avenue for sustainable heavy metal(loid)s remediation in groundwater and soils.

Effects of periodic drying-wetting on microbial dynamics and activity of nitrite/nitrate-dependent anaerobic methane oxidizers in intertidal wetland sediments

Nitrite/nitrate-dependent anaerobic methane oxidation (n-DAMO) plays an important role in methane (CH₄) consumption in intertidal wetlands. However, little is known about the responses of n-DAMO in intertidal wetlands to periodic drying-wetting caused by tidal cycling. Here, comparative experiments (waterlogged, desiccated, reflooded) with the Yangtze estuarine intertidal sediments were performed to examine the effects of periodic tidal changes on n-DAMO microbial communities, abundances, and potential activities. Functional gene sequencing indicated the coexistence of n-DAMO bacteria and archaea in the tide-fluctuating environments and generally higher biodiversity under reflooded conditions than consecutive inundation or emersion. The n-DAMO microbial abundance and associated activity varied significantly during alternative exposure and inundation, with higher abundance and activity under the waterlogged than desiccated conditions. Reflooding of intertidal wetlands might intensify n-DAMO activities, indicating the resilience of n-DAMO microbial metabolisms to the wetting-drying events. Structural equation modeling and correlation analysis showed that n-DAMO activity was highly related to n-DAMO microbial abundance and substrate availability under inundation, whereas salt accumulation in sediment was the primary factor restraining n-DAMO activity under the desiccation. Overall, this study reveals tidal-induced shifts of n-DAMO activity and associated contribution to mitigating CH₄, which may help accurately project CH₄ emission from intertidal wetlands under different tidal scenarios.

Formation of Cr-based layered double hydroxide: effect of the amendments

Chromium is one of the eight most popular inorganic soil pollutants in China, and its bioavailability is determined by the chemical states. Amendments, which are able to change the chemical forms of chromium and decrease its bioavailability, have received considerable attention in recent years. In this work, the formation of Cr-based layered double hydroxides (LDHs) and the immobilization of Cr in solution and soil were systemically investigated. The formation of Cr-based LDHs is strongly depended on the layer charges, aging temperatures and reaction time, as identified by X-ray diffraction (XRD), transmission electron microscope (TEM) and X-ray absorption fine structure (XAFS) spectrum. According to the pot experiment results, the concentration of Cr in the overground part of Brassica Chinensis L. was significantly decreased to 1.50-2.03 µg kg^- 1 in the present of amendments. In total, the finding of LDHs formation on amendments and the thermodynamic stability of LDHs provides a new insight into the remediation of Cr-polluted soils.

Biochar-based microbial agent reduces U and Cd accumulation in vegetables and improves rhizosphere microecology

Microbial remediation of heavy metals in soil has been widely studied. However, bioremediation efficiency is limited in practical applications because of nutritional deficiency, low efficiency, and competition with indigenous microorganisms. Herein, we prepared a biochar-based microbial agent (BMA) by immobilizing the microbial agent (MA, containing Bacillus subtilis, Bacillus cereus, and Citrobacter sp.) on biochar for the remediation of U and Cd in soil. The results showed that BMA increased soil organic matter, cation exchange capacity, and fluorescein diacetate hydrolysis activity and dehydrogenase activity by 58.7%, 38.2%, 42.9%, and 51.1%. The availability of U and Cd were significantly decreased by 67.4% and 54.2% in BMA amended soil, thereby reducing their accumulation in vegetables. BMA greatly promoted vegetable growth. Additionally, BMA significantly altered the structure and function of rhizosphere soil microbial communities. Coincidently, more abundant ecologically beneficial bacteria like Nitrospira, Nitrosomonas, Lysobacter, and Bacillus were observed, whereas plant pathogenic fungi like Fusarium and Alternaria reduced in BMA amended soil. The network analysis revealed that BMA amendment increased the tightness and complexity of microbial communities. Importantly, the compatibility of niches and microbial species within co-occurrence network was enhanced after BMA addition. These findings provide a promising strategy for suppressing heavy metal accumulation in vegetables and promoting their growth.

Typical JUNCAO Overwintering Performance and Optimized Cultivation Conditions of Pennisetum sp. in Guizhou, Southwest China

JUNCAO technology plays a critical role in managing soil ecology and alleviating contradiction between mushroom and forest, as JUNCAO can partially replace the wood chip as mushroom culture medium. At present, few reports focus on exploring the effects of seeding density, nitrogen fertilizers on JUNCAO growth and their overwintering performance. To close the above-mentioned research gaps, five typical types of JUNCAO were evaluated by investigating their grass yield, overwintering germination rates and nutrient adsorption condition. The results indicated that Pennisetum sp. showed the best overwintering performance. In addition, the optimized planting conditions for Pennisetum sp. include cultivation density (60 cm × 50 cm), oblique seeding using stem with double nodes, and 800 kg·ha−1 nitrogen fertilizer. This study gave good insights into low-temperature resisting performance and their overwintering characteristics of diverse JUNCAO species that favor for promoting the safe and efficient productions of the JUNCAO industry in subtropical areas.