Agga GE, Durso LM, Sistani KR. Poultry litter as a soil amendment enriches antibiotic resistant enterococci.
ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2025;
380:126531. [PMID:
40436098 DOI:
10.1016/j.envpol.2025.126531]
[Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2024] [Revised: 05/22/2025] [Accepted: 05/24/2025] [Indexed: 06/01/2025]
Abstract
While raw poultry litter from broiler houses is used as organic fertilizer for crop production, it may also enrich antibiotic resistant bacteria in the soil. In a randomized field trial, we evaluated the impact of poultry litter as a soil amendment on antimicrobial resistant enterococci in corn fields. Two winter cropping systems (fallow, and cover crop) were assigned to whole plots while three spring applied fertilizer treatments (untreated control, poultry litter, and chemical fertilizer) were randomly assigned to subplots. Soil samples were collected from the top 15 cm on days 0 (baseline, May 1), 7 (May 15), 28 (June 6), 70 (July 17), 98 (August 14), and 172 (October 27) post treatment (pt) in 2017. Samples were cultured for the enumeration and detection of generic (with no antibiotics), erythromycin- (ERYr), and tetracycline-resistant (TETr) enterococci. Resistant subpopulations were characterized for phenotypic and genotypic resistance. Poultry litter amendment significantly (P < 0.05) increased the levels of generic-, ERYr-, and TETr-enterococci on days 7 and 28 pt, compared to untreated control or chemical fertilizer. Beyond d 28 pt, enterococci levels, regardless of resistance status, did not significantly (P > 0.05) differ by fertilizer treatment, and returned to the baseline by d 70 pt. Cover crop significantly increased the concentration of generic enterococci, with no significant effects on the resistant subpopulations. Poultry litter amendment enriched ERYrEnterococcus casseliflavus while the most clinically important species, E. faecalis, was readily detected, regardless of fertilizer treatment. ERY and TET resistance were conferred mainly by ermB and tetM genes, respectively. Raw poultry litter amendment enriches total and antimicrobial resistant enterococci populations in the soil temporarily. However, further studies are needed to elucidate mechanisms behind this reduction after a temporary increase at the site of poultry litter application, and its impact beyond the agronomic fields.
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