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Akter S, Anower AKMM, Hossain MMK, Alim MA, Jahan N, Bhuyan AA, Salimullah M, Alam J. Genotyping of κ-casein and β-lactoglobulin genes in native cattle from Barishal region of Bangladesh. Anim Biotechnol 2020; 33:110-115. [PMID: 32567473 DOI: 10.1080/10495398.2020.1781145] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
Abstract
The study was conducted to determine the genetic variants of κ-casein and β-lactoglobulin genes in native cattle. DNA was extracted from blood samples (n = 80) collected from Babuganj, Barishal followed by PCR with gene-specific primers. Genotyping was done by RFLP with HindIII, and HaeIII restriction enzymes. Allelic and genotypic frequencies, genetic diversity, heterozygosity and Hardy-Weinberg equilibrium were estimated using the Popgen32 software. A total 80 samples were genotyped and three genotypes, namely AA, AB and BB, were detected for both the genes. In case of κ-casein gene, higher frequency was observed for AA genotype (0.73) followed by AB (0.23) and BB (0.04) genotype. A allele (0.84) was found to dominate over B allele (0.16). For β-lactoglobulin gene, BB genotype (0.66) was found more frequently than AB (0.18) and AA (0.16) genotypes. Highest frequency was found for B (0.75) followed by A (0.25) allele. The average genetic diversity (He) was 0.38. The result indicated differences between observed (Ho) and expected (He) heterozygosity and it was out of equilibrium genetics, assumed that selection pressure was in population. To the best of our knowledge, this is the first reported study on κ-casein and β-lactoglobulin gene variants analysis in cattle in Bangladesh.
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Affiliation(s)
- Salma Akter
- Department of Microbiology and Public Health, Patuakhali Science and Technology University, Babuganj Campus, Barishal, Bangladesh.,National Institute of Biotechnology, Ganakbari, Ashulia, Savar, Dhaka, Bangladesh
| | - A K M Mostafa Anower
- Department of Microbiology and Public Health, Patuakhali Science and Technology University, Babuganj Campus, Barishal, Bangladesh
| | - M M Kamal Hossain
- National Institute of Biotechnology, Ganakbari, Ashulia, Savar, Dhaka, Bangladesh
| | - Md Abdul Alim
- National Institute of Biotechnology, Ganakbari, Ashulia, Savar, Dhaka, Bangladesh
| | - Nusrat Jahan
- National Institute of Biotechnology, Ganakbari, Ashulia, Savar, Dhaka, Bangladesh
| | - Anjuman Ara Bhuyan
- National Institute of Biotechnology, Ganakbari, Ashulia, Savar, Dhaka, Bangladesh
| | - Md Salimullah
- National Institute of Biotechnology, Ganakbari, Ashulia, Savar, Dhaka, Bangladesh
| | - Jahangir Alam
- National Institute of Biotechnology, Ganakbari, Ashulia, Savar, Dhaka, Bangladesh
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Mohlatlole RP, Dzomba EF, Muchadeyi FC. Addressing production challenges in goat production systems of South Africa: The genomics approach. Small Rumin Res 2015; 131:43-9. [DOI: 10.1016/j.smallrumres.2015.08.003] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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Pazzola M, Dettori M, Pira E, Noce A, Paschino P, Vacca G. Effect of polymorphisms at the casein gene cluster on milk renneting properties of the Sarda goat. Small Rumin Res 2014. [DOI: 10.1016/j.smallrumres.2013.12.004] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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