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Caraballo LAS, Filho LASF, Sena LS, Biagiotti D, de Moura JDS, de Sousa Júnior A, Rocha AO, de Sousa FCB, da Silva Santos NP, Sarmento JLR. Genome-wide association study applied to prolificacy in Santa Inês sheep. Trop Anim Health Prod 2025; 57:169. [PMID: 40214842 DOI: 10.1007/s11250-025-04424-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2024] [Accepted: 04/04/2025] [Indexed: 05/01/2025]
Abstract
This study aimed to identify genomic regions associated with prolificacy in Santa Inês sheep raised in tropical conditions. The prolificacy of the dam was defined as single (only one lamb born per ewe per lambing) or multiple (more than one animal born per ewe per lambing). After quality control of phenotypic data, 1584 lambing records of 715 females occurred between the years 2000 and 2018 were used. The animals were genotyped with the OvineSNP50 BeadChip panel (Illumina Inc.). After quality control of genomic data, information of 46,714 SNPs and 388 samples and females was used for the subsequent analyses. The single-step GWAS (ssGWAS) methodology was used to estimate the effects of genetic markers and their association with the prolificacy. A total of 21 windows of 10 adjacent SNPs that explained at least 0.5% of the additive genetic variance for prolificacy were identified. In such regions, genes associated with different reproductive functions in the female were found: CACNA1E, NTRK1, PLCH1, SMAD3, CENPF, TOPBP1, IL33, DRD2, MID1, HCCS, and ARHGAP6. Some candidate regions related to prolificacy harbor genes that were not previously described and genes without known functions. These results can help to identify genes associated with prolificacy and could be used in genomic reproductive studies on prolificacy, as well as in the selection of the most prolific ewes in the population.
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Affiliation(s)
- Luis Andrés Salazar Caraballo
- Agrarian Sciences Center (CCA), Federal University of Piauí (UFPI), Campus Universitário Ministro Petrônio Portella, Teresina, PI, Brazil
| | | | - Luciano Silva Sena
- Phd in Animal Science, Graduate Program in Animal Science, Agrarian Sciences Center (CCA), UFPI, Campus Universitário Ministro Petrônio Portella, Teresina, Brazil
| | - Daniel Biagiotti
- Technical College of Teresina, UFPI, Campus Ministro Petrônio Portella, Teresina, PI, Brazil
| | - José Dos Santos de Moura
- Federal Institute of Education, Science and Technology of Piauí, IFPI, José de Freitas, PI, Brazil
| | - Antônio de Sousa Júnior
- Technical College of Teresina, UFPI, Campus Ministro Petrônio Portella, Teresina, PI, Brazil
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Castillo-Hernández G, González-Luna S, Castillo-Hernández L, Torres-Hernández G, Maldonado-Jáquez JA. Pre and post weaning performance of Columbia sheep under an intensive system of the central Mexico: an alternative to enhance meat production. Trop Anim Health Prod 2025; 57:137. [PMID: 40113628 DOI: 10.1007/s11250-025-04382-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2024] [Accepted: 03/07/2025] [Indexed: 03/22/2025]
Abstract
The aim of this study was to evaluate the pre and post-weaning performance of Columbia lambs under an intensive system in central Mexico. Productive data of 657 Columbia lambs (346 males and 5.3 kg at birth; 311 Females and 4.9 kg at birth) in the period from 2017 to 2020 were considered. Live weight data were collected by sex, birth weight (BW), pre-weaning average daily gain (preADG) and post-weaning average daily gain (postADG), weaning weight (WW), final weight (FW), final age (FA) and mortality percentage data. No significant interactions between year, sex and litter size were found (p > 0.05). Differences were detected among years for all variables (p < 0.05). When comparing males vs. females, the highest values were found in males in almost all the variables (p < 0.05) except for FW and mortality (p > 0.05). The age to achieve final weight was greater in females (p < 0.05). Regarding litter size, singles were heavier and had more preADG than twins (p < 0.05). The phenotypic correlations showed significant (p < 0.05) and positive relationships between 1) BW with preADG and postADG, 2) preADG with WW and 3) FW with FA. On the contrary, negative correlations were detected (p < 0.05) between 1) WW with postADG and 2) postADG with FW. In conclusion, Columbia breed lambs could played an important role to improve meat production in intensive systems in central Mexico.
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Affiliation(s)
- Gabriela Castillo-Hernández
- Facultad de Estudios Superiores Cuautitlán, Universidad Nacional Autónoma de México, 54714, Cuautitlán Izcalli, Estado de México, México
- Colegio de Postgraduados-Campus Montecillo. Programa de GanaderíaEstado de México, 56230, Montecillo, Estado de México, México
| | - Sandra González-Luna
- Facultad de Estudios Superiores Cuautitlán, Universidad Nacional Autónoma de México, 54714, Cuautitlán Izcalli, Estado de México, México
| | - Laura Castillo-Hernández
- Facultad de Estudios Superiores Cuautitlán, Universidad Nacional Autónoma de México, 54714, Cuautitlán Izcalli, Estado de México, México
| | - Glafiro Torres-Hernández
- Colegio de Postgraduados-Campus Montecillo. Programa de GanaderíaEstado de México, 56230, Montecillo, Estado de México, México
| | - Jorge A Maldonado-Jáquez
- Colegio de Postgraduados-Campus Montecillo. Programa de GanaderíaEstado de México, 56230, Montecillo, Estado de México, México.
- Instituto Nacional de Investigaciones Forestales, Agrícolas y Pecuarias. Campo Experimental La Laguna, 27440, Matamoros, Coahuila, México.
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Wilson CS, Taylor JB, Notter DR, Murphy TW, Stewart WC, Lewis RM. Benchmarking performance in Targhee sheep in development of a genetic reference flock. Transl Anim Sci 2024; 8:txae176. [PMID: 39749213 PMCID: PMC11694661 DOI: 10.1093/tas/txae176] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2024] [Accepted: 12/14/2024] [Indexed: 01/04/2025] Open
Abstract
The Targhee breed is important to range sheep production in the Western United States. The objective of this research was to integrate industry sires participating in national genetic evaluation through the National Sheep Improvement Program (NSIP) into the U.S. Sheep Experiment Station (USSES) flock, where the breed originated, to benchmark sire performance. Estimated breeding values (EBV) of industry sires (n = 16) and USSES sires (n = 12) from the 2023 NSIP Targhee genetic evaluation differed (P < 0.05) only for the NSIP Number Born EBV. This difference, and small (nonsignificant) differences favoring industry sires for maternal weaning weight, yearling fiber diameter, and yearling staple length EBV also resulted in greater (P < 0.05) Western Range Index scores for industry sires. The performance of sires' direct progeny born 2016 to 2018 was compared for 17 traits. After data cleaning, there were 664 progeny (417 from industry sires and 247 from USSES sires) with 146 to 664 records per trait. Least squares means differed (P < 0.05) for grease fleece weight, side fiber diameter, and britch fiber diameter in favor of the industry sires. Production traits were measured from the progeny and other retained descendants of both sire genetic groups from 2016 through 2022. After data cleaning, there was a range of 1,138 to 1,493 records per trait. A three-generation pedigree was constructed and the proportional assignment of each lamb to each genetic group (e.g., 0.5 industry, 0.5 USSES) was included in an augmented relationship matrix. A univariate animal model was fitted for each lamb trait and a repeated measures model for each of the three ewe traits was fitted to estimate variance components and predict breeding values. Genetic group solutions did not differ (P > 0.05) for any of these traits but provided a means by which to compare the two groups. Establishment of a Targhee genetic reference flock at USSES has been initiated, which can be used to address issues of importance to the industry.
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Affiliation(s)
- Carrie S Wilson
- USDA, ARS, Range Sheep Production Efficiency Research Unit, U.S. Sheep Experiment Station, Dubois, ID
| | - J Bret Taylor
- USDA, ARS, Range Sheep Production Efficiency Research Unit, U.S. Sheep Experiment Station, Dubois, ID
| | - David R Notter
- School of Animal Sciences, Virginia Tech, Blacksburg, VA
| | - Thomas W Murphy
- USDA, ARS, Livestock Bio-Systems Research Unit, Roman L. Hruska U.S. Meat Animal Research Center, Clay Center, NE
| | | | - Ronald M Lewis
- Department of Animal Science, University of Nebraska-Lincoln, Lincoln, NE
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Ehsaninia J. A study on the genetic and phenotypic factors affecting specific ewe productivity traits in Sangsari sheep. Trop Anim Health Prod 2024; 56:309. [PMID: 39352556 DOI: 10.1007/s11250-024-04124-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2024] [Accepted: 09/11/2024] [Indexed: 12/11/2024]
Abstract
The study's objectives were to assess the genetic parameters of reproductive characteristics in Sangsari sheep. A data set of reproductive information with pedigree details from 1995 to 2016 was used. Studied traits were litter size at birth (LSB), litter size at weaning (LSW), litter mean weight per lamb born (LMWLB), litter mean weight per lamb weaned (LMWLW), total litter weight at birth (TLWB) and total litter weight at weaning (TLWW). Test significance of the environmental factors to be included in the model was conducted using the general linear model procedure of the SAS program. All traits were significantly affected by the year of lambing and ewe age at lambing (P < 0.01). The AI-REML procedure of the Wombat program was used to evaluate genetic parameters. A series of bivariate animal models were employed to calculate genetic (rg) and phenotypic (rp) correlations between traits. The total least square means ± standard error of LSB and LSW were 1.04 ± 0.05 and 0.96 ± 0.03, while LMWLB, LMWLW, TLWB, and TLWW were 3.12 ± 0.08, 15.40 ± 0.13, 3.28 ± 0.04, and 19.31 ± 0.16 kg, respectively. The estimates of h2 were relatively low (P < 0.01) and ranged from 0.063 ± 0.028 for LSW to 0.181 ± 0.063 for TLWW. Repeatability estimates varied from 0.101 for LSW to 0.241 for TLWW. The sire service effects for LMWLB, TLWB, and TLWW were 0.012 ± 0.004, 0.023 ± 0.006, and 0.039 ± 0.009, respectively. The traits studied showed a greater magnitude of genetic correlation than phenotypic correlation, with values ranging from - 0.59 (LSB-LMWLB) to 0.87 (LMWLB-TLWB). It appears that focusing on TLWW for selection could result in more significant improvements in the reproductive performance of Sangsari ewes.
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Affiliation(s)
- Jamshid Ehsaninia
- Department of Agriculture, Minab Higher Education Center, University of Hormozgan, Bandar Abbas, Iran.
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Besufkad S, Goshme S, Abebe A, Bisrat A, Abebe A, Getachew T, Zewdie T, Lemma S, Areaya A, Gizaw S. Estimates of genetic parameters for growth traits in dorper crossbred sheep population. Trop Anim Health Prod 2024; 56:264. [PMID: 39302545 DOI: 10.1007/s11250-024-04170-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2023] [Accepted: 09/11/2024] [Indexed: 09/22/2024]
Abstract
The study was carried out to estimate genetic and phenotypic parameters for growth traits in Dorper crossbred sheep. The data set consisted of 5717 growth records from 1347 individuals of Dorper 50% crossbred sheep descended from 43 sires and 344 dams born between the years 2012 and 2022 at Debre Birhan Agricultural Research Center sheep research station, Ethiopia. Studied traits were birth weight (WT0), weaning weight (WT3), six months weight (WT6), yearling weight (WT12), average daily gain from birth to weaning (ADG1), average daily gain from weaning to six months (ADG2), average daily gain from six months to yearling (ADG3). The (co)variance components were estimated by fitting six different univariate animal models using Average Information Restricted Maximum Likelihood (AI-REML) procedure. Contrary to the genetic trend, phenotypic performance for all studied traits showed a declining trend over the years. Direct heritability estimates of 0.10 ± 0.06, 0.29 ± 0.09, 0.37 ± 0.10, 0.10 ± 0.09, 0.43 ± 0.15, 0.04 ± 0.05, and 0.14 ± 0.09 were obtained for WT0, WT3, WT6, WT12, ADG1, ADG2 and ADG3, respectively. Genetic correlations among the studied traits ranged from -0.43 (between ADG2 and ADG3) to 0.99 (between WT3 and ADG1). Selection for weaning, six months and pre-weaning average daily gain would be expected to yield good response as these traits were found moderately heritable. Strong to moderate genetic correlation of WT3 with WT6, WT12, and ADG1 suggested that selection based on WT3 would result in improvement of other growth traits due to correlated response.
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Affiliation(s)
- Shanbel Besufkad
- Debre Birhan Agricultural Research Center, Debre Birhan, Ethiopia.
| | - Shenkute Goshme
- Debre Birhan Agricultural Research Center, Debre Birhan, Ethiopia
| | - Aschalew Abebe
- Debre Birhan Agricultural Research Center, Debre Birhan, Ethiopia
| | - Asfaw Bisrat
- Debre Birhan Agricultural Research Center, Debre Birhan, Ethiopia
| | - Ayele Abebe
- Debre Birhan Agricultural Research Center, Debre Birhan, Ethiopia
| | - Tesfaye Getachew
- International Centre for Agricultural Research in the Dry Areas (ICARDA), Addis Ababa, Ethiopia
| | - Tesfaye Zewdie
- Debre Birhan Agricultural Research Center, Debre Birhan, Ethiopia
| | - Sisay Lemma
- Debre Birhan Agricultural Research Center, Debre Birhan, Ethiopia
| | - Alemnew Areaya
- Debre Birhan Agricultural Research Center, Debre Birhan, Ethiopia
| | - Solomon Gizaw
- International Livestock Research Institute (ILRI), Addis Ababa, Ethiopia
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Liu W, Lu Q, Tang S, Pu X, Wang Y, Wu C, Hu X, Hong W, Fu X. Comparison of different animal models for estimating genetic parameters for early growth traits and reproductive traits in Tianmu Sainuo sheep. Front Vet Sci 2024; 11:1349790. [PMID: 38818492 PMCID: PMC11137196 DOI: 10.3389/fvets.2024.1349790] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2023] [Accepted: 04/09/2024] [Indexed: 06/01/2024] Open
Abstract
As the economic level of individuals rises, so too does the demand for mutton. Enhancing the breeds of mutton sheep not only boosts production efficiency and economic benefits but also fosters the sustainable growth of the mutton sheep breeding industry. Thus, this study examines the early growth and reproductive traits of Tianmu Sainuo sheep, analyzing the genetic interactions among these traits to furnish a theoretical foundation for refining breeding strategies and expediting the genetic advancement of this breed. The investigation compiled 29,966 data entries, involving 111 sires for birth weight (BWT) and 113 for other metrics. The data encompassed 10,415 BWT records from 1,633 dams, 12,753 weaning weight (WWT) records from 1,570 dams, 12,793 average daily gain (ADG) records from 1,597 dams, and 13,594 litter size (LS) records from 1,499 dams. Utilizing the GLM procedure in SAS 9.2 software, the study analyzed the non-genetic influences on lamb BWT, WWT, ADG, and LS. Concurrently, DMU software estimated the variance components across various animal models for each trait. Employing the Akaike Information Criterion (AIC) and likelihood ratio test (LRT), six models were tested, incorporating or excluding maternal inheritance and environmental impacts, to identify the optimal model for deriving genetic parameters. The findings reveal that birth year (BY), birth quarter (BQ), birth type (BT), age of mother (AM), and birth sex (BS) exerted significant impacts on BWT, WWT, and ADG (p < 0.01). Additionally, BQ and AM significantly influenced LS (p < 0.01). The most accurate genetic evaluation model determined the heritability of BWT, WWT, ADG, and LS to be 0.0695, 0.0849, 0.0777, and 0.1252, respectively.
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Affiliation(s)
- Wenna Liu
- College of Animal Science, Xinjiang Agricultural University, Urumqi, Xinjiang, China
- Key Laboratory of Genetics Breeding and Reproduction of Xinjiang Wool-sheep & Cashmere-goat (XJYS1105), Institute of Animal Science, Xinjiang Academy of Animal Sciences, Urumqi, Xinjiang, China
| | - Qingwei Lu
- College of Animal Science, Xinjiang Agricultural University, Urumqi, Xinjiang, China
- Key Laboratory of Genetics Breeding and Reproduction of Xinjiang Wool-sheep & Cashmere-goat (XJYS1105), Institute of Animal Science, Xinjiang Academy of Animal Sciences, Urumqi, Xinjiang, China
| | - Sen Tang
- Key Laboratory of Animal Genetic Breeding & Reproduction of Ministry of Agriculture, Xinjiang Academy of Animal Science, Urumqi, Xinjiang, China
| | - Xue Pu
- Key Laboratory of Genetics Breeding and Reproduction of Xinjiang Wool-sheep & Cashmere-goat (XJYS1105), Institute of Animal Science, Xinjiang Academy of Animal Sciences, Urumqi, Xinjiang, China
- Key Laboratory of Special Species Conservation and Regulatory Biology, Key Laboratory of Plant Stress Biology in Arid Land, College of Life Science, Xinjiang Normal University, Urumqi, Xinjiang, China
| | - Yaqian Wang
- College of Animal Science, Xinjiang Agricultural University, Urumqi, Xinjiang, China
- Key Laboratory of Genetics Breeding and Reproduction of Xinjiang Wool-sheep & Cashmere-goat (XJYS1105), Institute of Animal Science, Xinjiang Academy of Animal Sciences, Urumqi, Xinjiang, China
| | - Cuiling Wu
- Key Laboratory of Special Species Conservation and Regulatory Biology, Key Laboratory of Plant Stress Biology in Arid Land, College of Life Science, Xinjiang Normal University, Urumqi, Xinjiang, China
| | - Xiangrong Hu
- Key Laboratory of Genetics Breeding and Reproduction of Xinjiang Wool-sheep & Cashmere-goat (XJYS1105), Institute of Animal Science, Xinjiang Academy of Animal Sciences, Urumqi, Xinjiang, China
| | - Wei Hong
- Zhejiang Sainuo Ecological Agriculture Company, Hangzhou, Lingan, China
| | - Xuefeng Fu
- Key Laboratory of Genetics Breeding and Reproduction of Xinjiang Wool-sheep & Cashmere-goat (XJYS1105), Institute of Animal Science, Xinjiang Academy of Animal Sciences, Urumqi, Xinjiang, China
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Besufkad S, Goshme S, Bisrat A, Abebe A, Abebe A, Getachew T, Areaya A, Zewdie T, Gizaw S. Estimation of genetic parameters for growth traits and kleiber ratio in dorper sheep breed. Heliyon 2024; 10:e24971. [PMID: 38312652 PMCID: PMC10835326 DOI: 10.1016/j.heliyon.2024.e24971] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2022] [Revised: 12/13/2023] [Accepted: 01/17/2024] [Indexed: 02/06/2024] Open
Abstract
The study aimed to estimate genetic and phenotypic parameters for growth traits and Kleiber ratio in Dorper sheep breed. Data used in this study were collected over 12 years (2012-2023) at Debre Birhan Agricultural Research Center sheep research station in Ethiopia. Studied traits were body weights at birth (WT0), weaning (WT3), six month (WT6), and yearling (WT12) age; average daily gains from birth to weaning (ADG0-3), from weaning to six months (ADG3-6), from six months to yearling (ADG6-12); and Kleiber ratios from birth to weaning (KR1) and from weaning to six months (KR2). The (co)variance components were estimated with different animal models using Average Information Restricted Maximum Likelihood (AI-REML) procedure. The best-fitted model for each trait was determined using likelihood ratio tests. Phenotypic performance for WT3, WT6, WT12, ADG0-3 and ADG3-6 showed a decline trend at a rate of 0.216 kg, 0.794 kg, 0.671 kg, 2.601 g and 4.865 g over years respectively. However, WT3, WT6, WT12, ADG0-3 showed a positive genetic improvement trend at a rate of 0.029 kg, 0.043 kg, 0.049 kg and 0.257 g over years respectively. Year of birth had a significant effect (P < 0.001) on all studied traits. Model including direct genetic as well as permanent environmental effect (Model 2) was chosen as the most appropriate model for WT0. Model which included only direct genetic effect (Model 1) was the best-fit model for all other studied traits. Direct heritability estimates based on suitable models were 0.07 ± 0.06, 0.11 ± 0.06, 0.09 ± 0.07, 0.11 ± 0.09 0.11 ± 0.06, 0.00 ± 0.04, 0.15 ± 0.07 and 0.00 ± 0.04 for WT0, WT3, WT6, WT12, ADG0-3, ADG3-6, KR1 and KR2 respectively. The variance ratio for the permanent environmental effect was 0.13 ± 0.04 for WT0. Genetic correlations among the traits ranged from negative (-0.39) for WT0-KR1 to high (0.99) for WT3-ADG0-3 and phenotypic correlations ranged from negative (-0.31) for WT0-KR1 to high (0.98) for WT3-ADG0-3. The low direct heritability estimates for the studied traits indicated that genetic improvement by direct selection might be difficult. Further investigation for the unexpected declined trend of phenotypic performance over years need to be required.
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Affiliation(s)
- Shanbel Besufkad
- Debre Birhan Agricultural Research Center, Debre Birhan, Ethiopia
| | - Shenkute Goshme
- Debre Birhan Agricultural Research Center, Debre Birhan, Ethiopia
| | - Asfaw Bisrat
- Debre Birhan Agricultural Research Center, Debre Birhan, Ethiopia
| | - Aschalew Abebe
- Debre Birhan Agricultural Research Center, Debre Birhan, Ethiopia
| | - Ayele Abebe
- Debre Birhan Agricultural Research Center, Debre Birhan, Ethiopia
| | - Tesfaye Getachew
- International Centre for Agricultural Research in the Dry Areas (ICARDA), Addis Ababa, Ethiopia
| | - Alemnew Areaya
- Debre Birhan Agricultural Research Center, Debre Birhan, Ethiopia
| | - Tesfaye Zewdie
- Debre Birhan Agricultural Research Center, Debre Birhan, Ethiopia
| | - Solomon Gizaw
- International Livestock Research Institute (ILRI), Addis Ababa, Ethiopia
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Koçak S, Çinkaya S, Tekerli M, Demirtaş M, Bozkurt Z, Çelikeloğlu K, Hacan Ö, Erdoğan M. Estimation of (Co) Variance Components and Genetic Parameters for Pre- and Post-Weaning Growth Traits in Dağlıç Sheep. Animals (Basel) 2023; 14:108. [PMID: 38200839 PMCID: PMC10777935 DOI: 10.3390/ani14010108] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2023] [Revised: 12/19/2023] [Accepted: 12/25/2023] [Indexed: 01/12/2024] Open
Abstract
The goal of this study was to estimate (co) variance components and genetic parameters for pre- and post-weaning growth traits in Dağlıç sheep, considering the direct additive genetic, maternal genetic, and maternal permanent environmental effects, with different statistical models. The information of 21,735 native Dağlıç lambs born between 2011 and 2021 was used to estimate (co) variance components by the Average Information-Restricted Maximum Likelihood algorithm. The results showed that the most suitable model was Model 3 for birth weight (BW), average daily gain (ADG), and weaning weight (WW). Model 4 was the most appropriate for weight at three (W3), weight at six (W6), and weight at twelve months of age (W12). The direct heritabilities for BW, W3, ADG, WW, W6, and W12 were 0.35 ± 0.02, 0.36 ± 0.03, 0.27 ± 0.02, 0.22 ± 0.02, 0.47 ± 0.05, and 0.47 ± 0.05, respectively. Genetic and phenotypic correlations amongst the traits were in the range of 0.103 ± 0.008 to 0.995 ± 0.002. These results can be used for the improvement of growth traits in the Dağlıç breed of sheep through selection.
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Affiliation(s)
- Serdar Koçak
- Department of Animal Science, Faculty of Veterinary Medicine, Afyon Kocatepe University, Afyonkarahisar 03200, Türkiye; (M.T.); (M.D.); (Z.B.); (K.Ç.); (Ö.H.)
| | - Samet Çinkaya
- Department of Animal Science, Faculty of Veterinary Medicine, Afyon Kocatepe University, Afyonkarahisar 03200, Türkiye; (M.T.); (M.D.); (Z.B.); (K.Ç.); (Ö.H.)
| | - Mustafa Tekerli
- Department of Animal Science, Faculty of Veterinary Medicine, Afyon Kocatepe University, Afyonkarahisar 03200, Türkiye; (M.T.); (M.D.); (Z.B.); (K.Ç.); (Ö.H.)
| | - Mustafa Demirtaş
- Department of Animal Science, Faculty of Veterinary Medicine, Afyon Kocatepe University, Afyonkarahisar 03200, Türkiye; (M.T.); (M.D.); (Z.B.); (K.Ç.); (Ö.H.)
| | - Zehra Bozkurt
- Department of Animal Science, Faculty of Veterinary Medicine, Afyon Kocatepe University, Afyonkarahisar 03200, Türkiye; (M.T.); (M.D.); (Z.B.); (K.Ç.); (Ö.H.)
| | - Koray Çelikeloğlu
- Department of Animal Science, Faculty of Veterinary Medicine, Afyon Kocatepe University, Afyonkarahisar 03200, Türkiye; (M.T.); (M.D.); (Z.B.); (K.Ç.); (Ö.H.)
| | - Özlem Hacan
- Department of Animal Science, Faculty of Veterinary Medicine, Afyon Kocatepe University, Afyonkarahisar 03200, Türkiye; (M.T.); (M.D.); (Z.B.); (K.Ç.); (Ö.H.)
| | - Metin Erdoğan
- Department of Veterinary Biology and Genetics, Faculty of Veterinary Medicine, Afyon Kocatepe University, Afyonkarahisar 03200, Türkiye;
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Balasundaram B, Muralidharan J, Murali N, Cauveri D, Raja A, Okpeku M, Thiruvenkadan AK. Development of selection strategies for genetic improvement in production traits of Mecheri sheep based on a Bayesian multi trait evaluation. PLoS One 2023; 18:e0289460. [PMID: 38096270 PMCID: PMC10721189 DOI: 10.1371/journal.pone.0289460] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2023] [Accepted: 11/30/2023] [Indexed: 12/18/2023] Open
Abstract
The progression of genetic selection techniques to enhance farm animal performance traits is guided by the present level of genetic variation and maternal impact in each trait, as well as the genetic association between traits. This study was conducted on a population of Mecheri sheep maintained from 1980 to 2018 at Mecheri Sheep Research Station, Pottaneri, India, to determine variance and covariance components, as well as genetic parameters for various production performance traits. A total of 2616 lambs, produced by 1044 dams and 226 sires, were examined in the study and the production traits of Mecheri sheep assessed include birth weight (BW), weaning weight (WW), six-month weight (SMW), nine-month weight (NMW), and yearling weight (YW). The Bayesian approach, using the Gibbs sampler, analyzed six animal models with different combinations of additive direct and maternal additive effects. Direct genetics, maternal genetics, and residual effects models were the major contributors to total phenotypic variation for all the production traits studied. Direct heritability estimates of birth weight, WW, SMW, NMW, and YW were 0.25, 0.20, 0.12, 0.14, and 0.13, respectively. The maternal heritability estimated for BW, WW, SMW, NMW, and YW were 0.17, 0.10, 0.12, 0.14, and 0.14, respectively. The maternal effects had a major impact on the pre-weaning production traits. The genetic correlations estimated between different pairs of production traits studied ranged from 0.19 to 0.93. The body weight at birth exhibited a higher genetic relationship with weaning weight than post-weaning growth characteristics, and the genetic correlation between weaning weight and post-weaning attributes was moderate to high (0.52 to 0.72). Based on the additive genetic variance in weaning weight and the correlation estimates of weaning weight with post-weaning traits, weaning weight was proposed as a selection criterion for improving growth traits in Mecheri sheep.
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Affiliation(s)
- Balakrishnan Balasundaram
- Department of Animal Genetics and Breeding, Veterinary College and Research Institute, Tamil Nadu Veterinary and Animal Sciences University, Orathanadu, Tamil Nadu, India
| | - Jaganadhan Muralidharan
- Mecheri Sheep Research Station, Tamil Nadu Veterinary and Animal Sciences University, Salem, Tamil Nadu, India
| | - Nagarajan Murali
- Department of Animal Genetics and Breeding, Veterinary College and Research Institute, Tamil Nadu Veterinary and Animal Sciences University, Namakkal, Tamil Nadu, India
| | - Doraiswamy Cauveri
- Department of Animal Genetics and Breeding, Madras Veterinary College, Tamil Nadu Veterinary and Animal Sciences University, Chennai, Tamil Nadu, India
| | - Angamuthu Raja
- Department of Animal Genetics and Breeding, Veterinary College and Research Institute, Tamil Nadu Veterinary and Animal Sciences University, Namakkal, Tamil Nadu, India
| | - Moses Okpeku
- Discipline of Genetics, School of Life Sciences, University of KwaZulu-Natal, Westville Campus, Durban, South Africa
| | - Aranganoor Kannan Thiruvenkadan
- Department of Animal Genetics and Breeding, Veterinary College and Research Institute, Tamil Nadu Veterinary and Animal Sciences University, Namakkal, Tamil Nadu, India
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Besufkad S, Goshme S, Abebe A, Bisrat A, Abebe A, Zewdie T, Areaya A, Alemayehu L, Kebede A, Getachew T. Genetic evaluation of growth rate and efficiency-related traits in Dorper × local crossbred sheep population. Trop Anim Health Prod 2023; 55:249. [PMID: 37353596 DOI: 10.1007/s11250-023-03669-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2022] [Accepted: 06/15/2023] [Indexed: 06/25/2023]
Abstract
The present study was carried out to estimate genetic and phenotypic parameters for growth rate and efficiency-related traits in Dorper crossbred sheep population. Data on body weight collected from 2012 to 2021 at Debre Birhan Agricultural Research Center, Amhara Regional State, Ethiopia, were used to estimate phenotypic and genetic parameters for daily gain from birth to weaning (DG0-3), daily gain from weaning to 6 months (DG3-6), and daily gain from 6 months to yearling (DG6-12) and corresponding Kleiber ratios (KR0-3, KR3-6, KR6-12), efficiency of growth (GE0-3, GE3-6, GE6-12), and relative growth rate (RG0-3, RG3-6, RG6-12). Genetic parameters were estimated by restricted maximum likelihood (REML) procedure fitting six different univariate animal models and the most appropriate model for each trait was determined by log-likelihood ratio test. Multivariate analysis was carried out to estimate correlations between traits. Year and season of birth had a significant effect (p<0.001) in all studied traits. Direct heritability estimates for DG0-3, DG3-6, DG6-12, KR0-3, KR3-6, KR6-12, GE0-3, GE3-6, GE6-12, GR0-3, GR3-6, and GR6-12 were 0.45±0.15, 0.04±0.06, 0.15±0.11, 0.30±0.08, 0.13±0.11, 0.14±0.12, 0.34±0.15, 0.39±0.17, 0.31±0.14, 0.25±0.08, 0.23±0.13, and 0.23±0.13 respectively. Genetic correlation estimates between DG3-6 and other traits were positive and high in magnitude to their respective growth phase (0.95, 0.86, and 0.91 for KR3-6, GE3-6, and GR3-6 respectively). As the Dorper crossbred sheep are reaches market weight at about 6 months of age, focusing on improving traits measured during weaning to 6 months of age is more feasible. Selection based on DG3-6 is recommended to improve efficiency-related traits.
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Affiliation(s)
- Shanbel Besufkad
- Debre Birhan Agricultural Research Center, Debre Birhan, Ethiopia.
| | - Shenkute Goshme
- Debre Birhan Agricultural Research Center, Debre Birhan, Ethiopia
| | - Aschalew Abebe
- Debre Birhan Agricultural Research Center, Debre Birhan, Ethiopia
| | - Asfaw Bisrat
- Debre Birhan Agricultural Research Center, Debre Birhan, Ethiopia
| | - Ayele Abebe
- Debre Birhan Agricultural Research Center, Debre Birhan, Ethiopia
| | - Tesfaye Zewdie
- Debre Birhan Agricultural Research Center, Debre Birhan, Ethiopia
| | - Alemnew Areaya
- Debre Birhan Agricultural Research Center, Debre Birhan, Ethiopia
| | | | - Ashenafi Kebede
- Debre Birhan Agricultural Research Center, Debre Birhan, Ethiopia
| | - Tesfaye Getachew
- International Centre for Agricultural Research in the Dry Areas (ICARDA), Addis Ababa, Ethiopia
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11
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Oberpenning J, Bohlouli M, Engel P, Hümmelchen H, Wagner H, Wehrend A, König S. Multiple-trait and structural equation modelling approaches to infer genetic relationships between tail length and weight traits in Merinoland sheep. J Anim Breed Genet 2023; 140:132-143. [PMID: 36583443 DOI: 10.1111/jbg.12752] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2022] [Accepted: 12/08/2022] [Indexed: 12/31/2022]
Abstract
Tail docking is routinely conducted in long-tailed sheep breeds to prevent flystrike infections, but it is not in agreement with legal guidelines and animal welfare issues. Selection on short tails is a sustainable alternative in this regard, but side effects on other breeding goal traits are unclear. In consequence, the present study aimed to estimate genetic parameters for tail length (TL) at birth, birth weight (BW), weaning weight (WW) and postweaning weight (PWW) at the slaughtering date considering single-trait (STM), multiple-trait (MTM) and structural equation models (SEM) with different random effects, and accordingly, different covariance structures. The SEM considered time-lagged recursive relationships among response variables in three different pathways. The first path pertained to the effect of TL on WW and of WW on PWW. The second path reflected the effect of BW on WW and of WW on PWW. The third path was the recursive effect of TL on PWW. The phenotypic data consisted of 2803 records for TL, 13,042 records for BW, 1556 records for WW and 3986 records for PWW from Merinoland lambs. Lambs were born in the period from 1995 to 2021 and kept at the university Gießen research station, Germany, with their naturally long tails. Genetic statistical model evaluation based on Bayesian and Akaike's information criteria suggested models simultaneously considering direct genetic, maternal genetic and maternal permanent environmental effects and respective covariances. For statistical models including the same random effects and covariance structures, SEM were superior over MTM. The direct heritability for TL from the best-fitting STM was 0.60 ± 0.08, indicating the potential for genetic reduction of tail length within a few generations. For growth traits, the direct heritabilities ranged from 0.16 ± 0.03 for BW to 0.31 ± 0.09 for PWW. The maternal heritabilities were 0.03 ± 0.03 for TL, 0.12 ± 0.02 for BW, 0.04 ± 0.03 for WW and 0.07 ± 0.03 for PWW, reflecting small, but the non-significant influence of uterine characteristics on the tail development. The direct genetic correlations between TL and all weight traits were positive and very similar to MTM and SEM but reflected antagonistic genetic relationships from a breeding perspective. Oppositely, the structural equation coefficients reflecting trait associations phenotypically were negative (favourable) for the time-lagged effects of TL on WW and on PWW. As an explanation, lambs with long and woolly tails have an increased risk for contamination with dirt and dust causing infections, which in turn impairs the body weight development. In conclusion, breeding on short tails should consider trait-associated environmental risk factors, for example, disease susceptibility, which can be mimicked via SEM approaches.
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Affiliation(s)
- Jennifer Oberpenning
- Institute of Animal Breeding and Genetics, Justus-Liebig-University Gießen, Gießen, Germany
| | - Mehdi Bohlouli
- Institute of Animal Breeding and Genetics, Justus-Liebig-University Gießen, Gießen, Germany
| | - Petra Engel
- Institute of Animal Breeding and Genetics, Justus-Liebig-University Gießen, Gießen, Germany
| | - Hannah Hümmelchen
- Clinic for Obstetrics, Gynaecology and Andrology of Large and Small Animals, University of Giessen, Giessen, Germany
| | - Henrik Wagner
- Clinic for Obstetrics, Gynaecology and Andrology of Large and Small Animals, University of Giessen, Giessen, Germany
| | - Axel Wehrend
- Clinic for Obstetrics, Gynaecology and Andrology of Large and Small Animals, University of Giessen, Giessen, Germany
| | - Sven König
- Institute of Animal Breeding and Genetics, Justus-Liebig-University Gießen, Gießen, Germany
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12
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Ehsaninia J. Growth rate and efficiency-related traits in Kermani lambs: estimations of (co)variance components and genetic parameters. Trop Anim Health Prod 2023; 55:92. [PMID: 36802285 DOI: 10.1007/s11250-023-03503-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2022] [Accepted: 02/11/2023] [Indexed: 02/23/2023]
Abstract
Using Kermani sheep, the current study estimated (co)variance components and genetic parameters for average daily gain, Kleiber's ratio, growth efficiency, and relative growth rate. Data were analyzed by the average information restricted maximum likelihood (AI-REML) method using six animal models with different combinations of direct and maternal effects. The best-fitting model was determined after testing for improvement in log-likelihood values. The estimates of h2 for average daily gain (ADG), Klieber's ratio (KR), growth efficiency (GE), and relative growth rate (RGR) in pre- and post-weaning phases were 0.13 ± 0.6 and 0.17 ± 0.02, 0.12 ± 0.04, and 0.16 ± 0.03; 0.05 ± 0.05 and 0.07 ± 0.03 and 0.06 ± 0.02 and 0.07 ± 0.01, respectively. Maternal heritabilities (m2) ranged from 0.03 ± 0.01 for relative growth rate in pre-weaning phase to 0.11 ± 0.04 for average daily gain in post-weaning period. The maternal permanent environmental component (Pe2) accounted for 3 to 13% to the phenotypic variance for all the studied traits. Estimated values of additive coefficient of variations (CVA) ranged from 2.79% for relative growth rate at 6 months of age to 23.74% for growth efficiency at yearling age. Genetic and phenotypic correlations among traits were ranged from -0.687 to 0.946 and -0.648 to 0.918, respectively. The result indicated that selection for growth rate and efficiency-related traits would also be less effective in achieving genetic change, because there was little additive genetic variation among Kermani lambs.
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Affiliation(s)
- Jamshid Ehsaninia
- Department of Agriculture, Minab Higher Education Center, University of Hormozgan, Bandar Abbas, Iran.
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13
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Multi-trait Bayesian analysis and genetic parameter estimates in production characters of Mecheri sheep of India. Trop Anim Health Prod 2023; 55:8. [DOI: 10.1007/s11250-022-03425-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2022] [Accepted: 12/06/2022] [Indexed: 12/23/2022]
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14
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Neves ACC, Prado OR, Blaschi W, Barreiros TRR, Deiss L, Lahoz B, Folch J, Alabart JL, de Morais RN, de Camargo Campos L, Monteiro ALG. ANTI-MULLERIAN HORMONE AS A PREDICTIVE ENDOCRINE MARKER FOR SELECTION OF WHITE DORPER EWE LAMBS AT PREPUBERTAL AGE. Small Rumin Res 2023. [DOI: 10.1016/j.smallrumres.2023.106932] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/21/2023]
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15
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da Silva MS, Browning R, Leite-Browning ML, Lobo RNB. GENETIC PARAMETERS FOR FECAL EGGS COUNT AND REPRODUCTIVE/MATERNAL EFFICIENCY OF DOES RAISED IN HUMID SUBTROPICAL CLIMATE. Small Rumin Res 2023. [DOI: 10.1016/j.smallrumres.2023.106929] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/11/2023]
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16
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Genetic Parameters of Growth Traits and Quantitative Genetic Metrics for Selection and Conservation of Mecheri Sheep of Tamil Nadu. Animals (Basel) 2023; 13:ani13030454. [PMID: 36766344 PMCID: PMC9913403 DOI: 10.3390/ani13030454] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2022] [Revised: 01/01/2023] [Accepted: 01/27/2023] [Indexed: 02/01/2023] Open
Abstract
Determining the genetic and non-genetic sources of variation in a breed is vital for the formulation of strategies for its conservation and improvement. The present study was aimed at estimating the (co)variance components and genetic parameters of Mecheri sheep by fitting six different animal models in the restricted maximum likelihood method, with a preliminary investigation on the performance of animals for non-genetic sources of variation. A total of 2616 lambs were studied, and varying levels of significance were found for the effects of period, season, parity of dam, and birth type on different body-weight traits. Direct heritability estimates derived from the best animal model for body weight at birth, three months, six months, nine months, and twelve months were 0.21, 0.24, 0.10, 0.15, and 0.09, respectively, and the maternal heritability of the corresponding traits was 0.12, 0.05, 0.04, 0.04, and 0.04, respectively. The genetic correlations between the body-weight traits were all positive and moderate-to-strong, except for the correlation between birth weight and the other body-weight traits. The significance of non-genetic factors studied in this work demanded a correction to improve the accuracy of the direct selection of lambs for body-weight traits. The estimated genetic parameters identified the weaning weight as a selection criterion for the improvement in body weight of Mecheri lambs at different ages. Inbred individuals accounted for approximately 13% of the total population in the Mecheri sheep population studied. There were 877 founders in the population, and the actual effective population size was 128.48. The population's mean generation interval was 3.26. The mean inbreeding values ranged from 0.005 to 0.010 across generations. The population's average relatedness ranged from 0.001 to 0.014 across generations. Individual inbreeding was found to be 0.45 per cent for the entire population and 3.4 per cent for the inbred population.
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17
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Habtegiorgis K, Haile A, Getachew T, Kirmani MA, Gemiyo D. Analysis of genetic parameters and genetic trends for early growth and reproductive traits of Doyogena sheep managed under community-based breeding program. Heliyon 2022; 8:e09749. [PMID: 35785225 PMCID: PMC9243177 DOI: 10.1016/j.heliyon.2022.e09749] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2022] [Revised: 03/21/2022] [Accepted: 06/16/2022] [Indexed: 11/24/2022] Open
Abstract
This study aims to estimate genetic parameters and genetic trends for early growth and reproductive traits of Doyogena sheep. Data used in the study were collected over 6 years (2013–2018). Studied traits were birth weight (BWT), weaning weight (WWT), 6-month weight (SMWT), average daily gains from birth to weaning (ADG0-3), average daily gains from weaning to 6-month age (ADG3-6), average daily gain from birth to 6-month age (ADG0-6), litter size (LS), lambing interval (LI), age at first lambing (AFL), and annual reproductive rate (ARR). (Co) variance components and genetic parameters were estimated using restricted maximum likelihood (REML). The analyses were carried out using WOMBAT program. Univariate analysis was applied to estimate genetic parameters. Six different animal models were fitted by including or excluding maternal effects. The direct heritability estimates for BWT, WWT, SMWT, ADG0-3, ADG3-6 and ADG0-6 were 0.33 ± 0.06, 0.31 ± 0.06, 0.14 ± 0.06, 0.13 ± 0.04, 0.11 ± 0.07, and 0.02 ± 0.05 respectively. Direct heritability for LS, LI, and AFL were 0.28 ± 0.12, 0.20 ± 0.5, and 0.001 ± 0.3, respectively. The maternal heritability estimates for BWT, WWT, and LS were 0.24 ± 0.12, 0.60 ± 0.07, and 0.24 ± 0.08, respectively. The genetic correlation between BWT with WWT and BWT with SMWT were 0.21 ± 0.07 and 0.21 ± 0.09, respectively. Genetic progress for most of the studied traits has shown promising improvements. Thus, continuation of selection, therefore, suggested for more improvements in the performance of Doyogena sheep. Direct heritability estimates decrease as lamb age increases and selection based on earlier body weight will be more efficient.
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Affiliation(s)
- Kebede Habtegiorgis
- Southern Agricultural Research Institute, Areka Agricultural Research Center, P.O. Box 79, Areka, Ethiopia
- Corresponding author.
| | - Aynalem Haile
- International Center for Agricultural Research in the Dry Areas, P.O. Box. 5689, Addis Ababa, Ethiopia
| | - Tesfaye Getachew
- International Center for Agricultural Research in the Dry Areas, P.O. Box. 5689, Addis Ababa, Ethiopia
| | - Manzoor Ahmed Kirmani
- Jmma University College of Agriculture and Veterinary Medicine, P.O. Box, 307, Jimma, Ethiopia
| | - Deribe Gemiyo
- Southern Agricultural Research Institute, Areka Agricultural Research Center, P.O. Box 79, Areka, Ethiopia
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Öziş Altınçekiç Ş, Hanoğlu Oral H, Duru S. Estimation of Breeding Values and Genetic Trend of Some Growth Traits in Merino Sheep. Small Rumin Res 2022. [DOI: 10.1016/j.smallrumres.2022.106727] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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19
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Oyieng E, Mrode R, Ojango JM, Ekine-Dzivenu CC, Audho J, Okeyo AM. Genetic parameters and genetic trends for growth traits of the Red Maasai sheep and its crosses to Dorper sheep under extensive production system in Kenya. Small Rumin Res 2022. [DOI: 10.1016/j.smallrumres.2021.106588] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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20
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Fuerst-Waltl B, Fuerst C. Development of a routine genetic evaluation and a total merit index for sheep breeds with focus on meat production. Small Rumin Res 2021. [DOI: 10.1016/j.smallrumres.2021.106467] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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21
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Ehsaninia J. Estimates of (co)variance components and genetic parameters for pre-weaning body weight traits and Kleiber ratio in Sangsari sheep breed. ITALIAN JOURNAL OF ANIMAL SCIENCE 2021. [DOI: 10.1080/1828051x.2021.1908860] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Jamshid Ehsaninia
- Department of Agriculture, Minab Higher Education Center, University of Hormozgan, Bandar Abbas, Iran
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22
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Latifi M, Naderi Y, Mortazavi A, Bohlouli M, Sadeghi S. Variation in autosomal and sex-linked genetic effects for growth traits in Markhoz goat using multivariate animal models. Trop Anim Health Prod 2020; 52:2917-2923. [PMID: 32588360 DOI: 10.1007/s11250-020-02300-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2019] [Accepted: 05/13/2020] [Indexed: 12/01/2022]
Abstract
The present study was conducted to estimate autosomal and sex-linked genetic parameters by restricted maximum likelihood method using four different multivariate models for growth traits in Markhoz goat. Data were collected over a period of 23 years (1992-2014) from the breeding station of Markhoz goat. The studied growth traits were birth weight (BW), weaning weight (WW), 6-month weight (6WT), 9-month weight (9WT), and 12-month weight (12WT). The best model was determined by Akaike's information criterion. Based on the best model, direct autosomal heritabilities of 0.18, 0.10, 0.12, 0.22, and 0.24 were obtained for BW, WW, 6WT, 9WT, and 12WT, respectively. On the other hand, estimates of direct sex-linked heritability for BW, WW, 6WT, 9WT, and 12WT were 0.02, 0.01, 0.002, 0.03, and 0.04, respectively. The maternal permanent environmental component was remarkable for growth traits. Direct autosomal additive genetic correlations among the traits were positive and varied from 0.11 between BW and 9WT to 0.95 between BW and WW. The positive correlations were also estimated for direct sex-linked additive genetic effect except between BW-6WT (- 0.07) and WW-6WT (-0.19). The result of this study indicated that sex-linked chromosome effect had more considerable influence at post-weaning traits.
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Affiliation(s)
- Meysam Latifi
- Department of Animal Science, Kurdistan University, Sanandaj, Iran
| | - Yousef Naderi
- Department of Animal Science, Young Researchers and Elite Club, Astara Branch, Islamic Azad University, Astara, Iran.
| | - Amin Mortazavi
- Department of Animal Science, Kurdistan University, Sanandaj, Iran
| | - Mehdi Bohlouli
- Institute of Animal Breeding and Genetics, Justus-Liebig-University Gießen, 35390, Giessen, Germany
| | - Saadat Sadeghi
- Department of Genetics and Animal Breeding, University of Tabriz, Tabriz, Iran
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23
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Mohammadi A, Latifi M. Autosomal and sex-linked (co)variance components and genetic parameters for growth traits of Iranian Zandi sheep. Trop Anim Health Prod 2020; 52:1023-1032. [PMID: 32170649 DOI: 10.1007/s11250-019-02089-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2018] [Accepted: 09/20/2019] [Indexed: 10/24/2022]
Abstract
Separation of autosomal and sex-linked direct additive genetic effects has significant role in sheep breeding programs. Hence, this study was conducted to determine the genetic parameters of autosomal and sex-linked effects for growth traits of Zandi sheep. The data set used in this study contained 7571 Zandi lambs, descendent of 220 sires and 1481 dams, which were collected from Zandi sheep breeding Station at Khojir, Tehran, Iran from 1992 to 2011. The fixed effects included of year (20 classes), season (winter and spring), sex (male or female), birth type (single or twin), and the age of dam (seven classes, 2-8 years old). The data were analyzed using REML methodology by WOMBAT software. In the most appropriate fitted model, based on Akaike's information criterion (AIC) and Bayesian information criterion (BIC), the values of direct autosomal heritabilities of birth weight (BW), kleiber ratio at weaning (KR), 6-month weight (6MW), and 9-month weight (9MW) were 0.12 ± 0.03, 0.29 ± 0.05, 0.14 ± 0.04, and 0.15 ± 0.04, respectively. Furthermore, weaning weight (WW), average daily gain from birth to weaning (ADG), and 12-month weight (12 MW) showed the values of 0.19 ± 0.03 and 0.22 ± 0.03, 0.13 ± 0.05 and 0.15 ± 0.03, and 0.15 ± 0.05 and 0.18 ± 0.05, respectively. Based on the best models through all traits, estimates of the direct sex-linked heritability ranged from 0.0 (WW, ADG, KR, and 6MW) to 0.02 ± 0.03 (12MW). The average of autosomal and sex-linked breeding values (BVs) of body growth traits except KR (for autosomal) and 9MW and 12MW (for sex-linked) were greater than zero. The Pearson's/Spearman's correlation coefficients varied between 0.344 and 0.599/0.30 and 0.61 for autosomal and sex-linked BVs. Direct autosomal and sex-linked additive correlations for growth traits were ranged from - 0.02 (BW-KR) to 0.98 (WW-ADG) and 0.04 (KR-9 MW) to 0.99 (WW-ADG), respectively. Our results revealed that the genetic parameters related to growth traits in Zandi sheep could be more useful in selection strategies.
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Affiliation(s)
- Ali Mohammadi
- Genetics and Animal Breeding, University of Tabriz, Tabriz, Iran
| | - Meysam Latifi
- Genetics and Animal Breeding, University of Kurdistan, Sanandaj, Iran.
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Mahala S, Saini S, Kumar A, Prince L, Gowane G. Effect of non-genetic factors on growth traits of Avikalin sheep. Small Rumin Res 2019. [DOI: 10.1016/j.smallrumres.2019.03.006] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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25
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Sallam AM, Ibrahim AH, Alsheikh SM. Estimation of genetic parameters and variance components of pre-weaning growth traits in Barki lambs. Small Rumin Res 2019. [DOI: 10.1016/j.smallrumres.2018.11.027] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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26
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Kiya CK, Pedrosa VB, Muniz KFA, Gusmão AL, Pinto LFB. Estimates of the genetic parameters of a Dorper flock in Brazil. Small Rumin Res 2019. [DOI: 10.1016/j.smallrumres.2018.12.007] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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27
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Estimates of covariance functions for growth of Kordi sheep in Iran using random regression models. Small Rumin Res 2018. [DOI: 10.1016/j.smallrumres.2018.03.007] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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28
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Estimation of the variance due to parent-of-origin effects for productive and reproductive traits in Lori-Bakhtiari sheep. Small Rumin Res 2018. [DOI: 10.1016/j.smallrumres.2018.01.022] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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29
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Estimates of direct and maternal (co)variance components as well as genetic parameters of growth traits in Nellore sheep. Trop Anim Health Prod 2017; 49:1431-1438. [PMID: 28691136 DOI: 10.1007/s11250-017-1344-2] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2017] [Accepted: 06/22/2017] [Indexed: 10/19/2022]
Abstract
In the present study, (co)variance components and genetic parameters in Nellore sheep were obtained by restricted maximum likelihood (REML) method using six different animal models with various combinations of direct and maternal genetic effects for birth weight (BW), weaning weight (WW), 6-month weight (6MW), 9-month weight (9MW) and 12-month weight (YW). Evaluated records of 2075 lambs descended from 69 sires and 478 dams over a period of 8 years (2007-2014) were collected from the Livestock Research Station, Palamaner, India. Lambing year, sex of lamb, season of lambing and parity of dam were the fixed effects in the model, and ewe weight was used as a covariate. Best model for each trait was determined by log-likelihood ratio test. Direct heritability for BW, WW, 6MW, 9MW and YW were 0.08, 0.03, 0.12, 0.16 and 0.10, respectively, and their corresponding maternal heritabilities were 0.07, 0.10, 0.09, 0.08 and 0.11. The proportions of maternal permanent environment variance to phenotypic variance (Pe2) were 0.07, 0.10, 0.07, 0.06 and 0.10 for BW, WW, 6MW, 9MW and YW, respectively. The estimates of direct genetic correlations among the growth traits were positive and ranged from 0.44(BW-WW) to 0.96(YW-9MW), and the estimates of phenotypic and environmental correlations were found to be lower than those of genetic correlations. Exclusion of maternal effects in the model resulted in biased estimates of genetic parameters in Nellore sheep. Hence, to implement optimum breeding strategies for improvement of traits in Nellore sheep, maternal effects should be considered.
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Yeganehpur Z, Roshanfekr H, Fayazi J, Hossein Beyranvand M. Inbreeding depression on growth traits of Iranian Lori sheep. REV COLOMB CIENC PEC 2016. [DOI: 10.17533/udea.rccp.v29n4a03] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
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