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Faialaga NH, Danheiser RL. Total Synthesis of (-)-Herbindoles A, B, and C and (+)- trans-Herbindole A via a Convergent Benzannulation Strategy. J Org Chem 2025; 90:6844-6853. [PMID: 40366091 DOI: 10.1021/acs.joc.5c00653] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/15/2025]
Abstract
The herbindoles are cyclopent[g]indole alkaloids whose structures incorporate a fully substituted benzenoid ring and, as such, have served as useful platforms for the testing and refinement of methods for the construction of highly substituted indoles. Herein we report efficient and convergent total syntheses of four herbindole alkaloids, including the first enantioselective total synthesis of trans-(+)-herbindole A. The pivotal step in the synthetic strategy is the application of our vinylketene-based benzannulation in which a thermal Wolff rearrangement generates a vinylketene which combines with an ynamide derivative in the first step of a pericyclic cascade that produces a highly substituted aniline intermediate primed for cyclization to form the cyclopent[g]indole ring system. Subsequent cross-coupling reactions allow for the elaboration of a common precursor to herbindoles of the A, B, and C series.
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Affiliation(s)
- Nathan H Faialaga
- Department of Chemistry, Massachusetts Institute of Technology Cambridge, Massachusetts 02139, United States
| | - Rick L Danheiser
- Department of Chemistry, Massachusetts Institute of Technology Cambridge, Massachusetts 02139, United States
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2
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Nambu H, Amano R, Tamura T, Yakura T. Rhodium(II)‐Catalyzed Site‐Selective Intramolecular Insertion of Aryldiazoacetates into Unactivated Primary C−H Bond: A Direct Route to 2‐Unsubstituted Indanes. Adv Synth Catal 2022. [DOI: 10.1002/adsc.202200115] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Hisanori Nambu
- Faculty of Pharmaceutical Sciences University of Toyama Sugitani Toyama 930-0194 Japan
| | - Ryoya Amano
- Faculty of Pharmaceutical Sciences University of Toyama Sugitani Toyama 930-0194 Japan
| | - Takafumi Tamura
- Faculty of Pharmaceutical Sciences University of Toyama Sugitani Toyama 930-0194 Japan
| | - Takayuki Yakura
- Faculty of Pharmaceutical Sciences University of Toyama Sugitani Toyama 930-0194 Japan
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3
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Salib MN, Molinski TF. Six Trikentrin-like Cyclopentanoindoles from Trikentrion flabelliforme. Absolute Structural Assignment by NMR and ECD. J Org Chem 2018; 83:1278-1286. [PMID: 29320183 DOI: 10.1021/acs.joc.7b02813] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Six new cyclopenta[g]indoles were isolated from a West Australian sponge, Trikentrion flabelliforme Hentschel, 1912, and their structures elucidated by integrated spectroscopic analysis. The compounds are analogues of previously described trikentrins, herbindoles, and trikentramides from related Axinellid sponges. The assignment of absolute configuration of the new compounds was carried out largely by comparative analysis of specific rotation, calculated and measured ECD, and exploiting van't Hoff's principle of optical superposition. Five of the new compounds were chemically interconverted to establish their stereochemical relationships, leading to a simple chiroptical mnemonic for assignment of the this family of chiral indoles. The first biosynthetic hypothesis is advanced to explain the origin of the trikentrin-herbinole family and proposes a pyrrole-carboxylic thioester-initiated polyketide synthase mechanism.
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Affiliation(s)
- Mariam N Salib
- Department of Chemistry and Biochemistry, and §Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California , San Diego, 9500 Gilman Drive MC-0358, La Jolla, California 92093-0358, United States
| | - Tadeusz F Molinski
- Department of Chemistry and Biochemistry, and §Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California , San Diego, 9500 Gilman Drive MC-0358, La Jolla, California 92093-0358, United States
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4
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Leal RA, Bischof C, Lee YV, Sawano S, McAtee CC, Latimer LN, Russ ZN, Dueber JE, Yu JQ, Sarpong R. Application of a Palladium-Catalyzed C−H Functionalization/Indolization Method to Syntheses ofcis-Trikentrin A and Herbindole B. Angew Chem Int Ed Engl 2016; 55:11824-8. [DOI: 10.1002/anie.201605475] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2016] [Indexed: 11/08/2022]
Affiliation(s)
- Raul A. Leal
- Department of Chemistry; University of California, Berkeley; Berkeley CA 94720 USA
| | - Caroline Bischof
- Department of Chemistry; University of California, Berkeley; Berkeley CA 94720 USA
| | - Youjin V. Lee
- Department of Chemistry; University of California, Berkeley; Berkeley CA 94720 USA
| | - Shota Sawano
- Department of Chemistry; University of California, Berkeley; Berkeley CA 94720 USA
| | | | - Luke N. Latimer
- Department of Bioengineering; University of California, Berkeley; Berkeley CA 94720 USA
| | - Zachary N. Russ
- Department of Bioengineering; University of California, Berkeley; Berkeley CA 94720 USA
| | - John E. Dueber
- Department of Bioengineering; University of California, Berkeley; Berkeley CA 94720 USA
| | - Jin-Quan Yu
- Department of Chemistry; The Scripps Research Institute; La Jolla CA 92037 USA
| | - Richmond Sarpong
- Department of Chemistry; University of California, Berkeley; Berkeley CA 94720 USA
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5
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Leal RA, Bischof C, Lee YV, Sawano S, McAtee CC, Latimer LN, Russ ZN, Dueber JE, Yu J, Sarpong R. Application of a Palladium‐Catalyzed C−H Functionalization/Indolization Method to Syntheses of
cis
‐Trikentrin A and Herbindole B. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201605475] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Raul A. Leal
- Department of Chemistry University of California, Berkeley Berkeley CA 94720 USA
| | - Caroline Bischof
- Department of Chemistry University of California, Berkeley Berkeley CA 94720 USA
| | - Youjin V. Lee
- Department of Chemistry University of California, Berkeley Berkeley CA 94720 USA
| | - Shota Sawano
- Department of Chemistry University of California, Berkeley Berkeley CA 94720 USA
| | | | - Luke N. Latimer
- Department of Bioengineering University of California, Berkeley Berkeley CA 94720 USA
| | - Zachary N. Russ
- Department of Bioengineering University of California, Berkeley Berkeley CA 94720 USA
| | - John E. Dueber
- Department of Bioengineering University of California, Berkeley Berkeley CA 94720 USA
| | - Jin‐Quan Yu
- Department of Chemistry The Scripps Research Institute La Jolla CA 92037 USA
| | - Richmond Sarpong
- Department of Chemistry University of California, Berkeley Berkeley CA 94720 USA
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6
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Marsch N, Kock M, Lindel T. Study on the synthesis of the cyclopenta[f]indole core of raputindole A. Beilstein J Org Chem 2016; 12:334-42. [PMID: 26977193 PMCID: PMC4778506 DOI: 10.3762/bjoc.12.36] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2015] [Accepted: 02/05/2016] [Indexed: 12/04/2022] Open
Abstract
The raputindoles from the rutaceous tree Raputia simulans share a cyclopenta[f]indole partial structure the synthesis of which is subject of this investigation. An efficient route to a series of 1,5-di(indol-6-yl)pentenones was developed via Mo/Au-catalyzed Meyer–Schuster rearrangement of tertiary propargylic alcohol precursors. However, none of the enones underwent the desired Nazarov cyclization to a cyclopenta[f]indole. More suitable were 6-hydroxyallylated indolines which gave good yields of cyclopenta[f]indolines after treatment with SnCl4, as soon as sterically demanding β-cyclocitral adducts were reacted. Most successful were Pt(II) and Au(I)-catalyzed cyclizations of N-TIPS-protected indolin-6-yl-substituted propargylacetates which provided the hydrogenated tricyclic cyclopenta[f]indole core system in high yield.
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Affiliation(s)
- Nils Marsch
- Institute of Organic Chemistry, TU Braunschweig, Hagenring 30, 38106 Braunschweig, Germany
| | - Mario Kock
- Institute of Organic Chemistry, TU Braunschweig, Hagenring 30, 38106 Braunschweig, Germany
| | - Thomas Lindel
- Institute of Organic Chemistry, TU Braunschweig, Hagenring 30, 38106 Braunschweig, Germany
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7
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Synthetic Advances in the Indane Natural Product Scaffolds as Drug Candidates. ACTA ACUST UNITED AC 2016. [DOI: 10.1016/b978-0-444-63932-5.00008-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/03/2023]
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8
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Christmann M, Hu J, Kitamura M, Stoltz B. Tetrahedron reports on organic chemistry. Tetrahedron 2015. [DOI: 10.1016/s0040-4020(15)00744-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Abstract
In 1989, the reaction of vinyl magnesium halides with ortho-substituted nitroarenes leading to indoles was discovered. This reaction is now frequently reported as the "Bartoli reaction" or the "Bartoli indole synthesis" (BIS). It has rapidly become the shortest and most flexible route to 7-substituted indoles, because the classical indole syntheses generally fail in their preparation. The flexibility of the Bartoli reaction is great as it can be extended to heteroaromatic nitro derivatives and can be run on solid support. This review will focus on the use of the Bartoli indole synthesis as the key step in preparations of complex indoles, which appeared in the literature in the last few years.
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Affiliation(s)
- Giuseppe Bartoli
- Dipartimento Chimica Industriale 'Toso Montanari', Università di Bologna, Viale Risorgimento 4, I-40136 Bologna, Italy.
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Jagtap PR, Ford L, Deister E, Pohl R, Císařová I, Hodek J, Weber J, Mackman R, Bahador G, Jahn U. Highly functionalized and potent antiviral cyclopentane derivatives formed by a tandem process consisting of organometallic, transition-metal-catalyzed, and radical reaction steps. Chemistry 2014; 20:10298-304. [PMID: 25043655 DOI: 10.1002/chem.201402595] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2014] [Indexed: 11/11/2022]
Abstract
A simple modular tandem approach to multiply substituted cyclopentane derivatives is reported, which succeeds by joining organometallic addition, conjugate addition, radical cyclization, and oxygenation steps. The key steps enabling this tandem process are the thus far rarely used isomerization of allylic alkoxides to enolates and single-electron transfer to merge the organometallic step with the radical and oxygenation chemistry. This controlled lineup of multiple electronically contrasting reactive intermediates provides versatile access to highly functionalized cyclopentane derivatives from very simple and readily available commodity precursors. The antiviral activity of the synthesized compounds was screened and a number of compounds showed potent activity against hepatitis C and dengue viruses.
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Affiliation(s)
- Pratap R Jagtap
- Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, Flemingovo namesti 2, 16610 Prague (Czech Republic)
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12
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Campbell CD, Greenaway RL, Holton OT, Chapman HA, Anderson EA. Palladium-catalyzed cyclization of bromoenynamides to tricyclic azacycles: synthesis of trikentrin-like frameworks. Chem Commun (Camb) 2014; 50:5187-9. [DOI: 10.1039/c3cc45634j] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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13
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Stoltz B, Motherwell W. Tetrahedron reports on organic chemistry. Tetrahedron 2013. [DOI: 10.1016/s0040-4020(13)01252-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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14
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Sarnpitak P, Trongchit K, Kostenko Y, Sathalalai S, Gleeson MP, Ruchirawat S, Ploypradith P. Synthesis of Substituted 2-Arylindanes from E-(2-Stilbenyl)methanols via Lewis Acid-Mediated Cyclization and Nucleophililc Transfer from Trialkylsilyl Reagents. J Org Chem 2013; 78:8281-96. [DOI: 10.1021/jo4013755] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Pakornwit Sarnpitak
- Laboratory
of Medicinal Chemistry, Chulabhorn Research Institute, and Program in Chemical
Biology, Chulabhorn Graduate Institute,
54 Kamphaeng Phet 6, Talat Bangken, Laksi, Bangkok, Thailand 10210
| | - Kanokrat Trongchit
- Laboratory
of Medicinal Chemistry, Chulabhorn Research Institute, and Program in Chemical
Biology, Chulabhorn Graduate Institute,
54 Kamphaeng Phet 6, Talat Bangken, Laksi, Bangkok, Thailand 10210
| | - Yulia Kostenko
- Laboratory
of Medicinal Chemistry, Chulabhorn Research Institute, and Program in Chemical
Biology, Chulabhorn Graduate Institute,
54 Kamphaeng Phet 6, Talat Bangken, Laksi, Bangkok, Thailand 10210
| | - Supaporn Sathalalai
- Laboratory
of Medicinal Chemistry, Chulabhorn Research Institute, and Program in Chemical
Biology, Chulabhorn Graduate Institute,
54 Kamphaeng Phet 6, Talat Bangken, Laksi, Bangkok, Thailand 10210
| | - M. Paul Gleeson
- Department of Chemistry, Kasetsart University, 50 Phahonyothin Road, Bangkok,
Thailand 10900
| | - Somsak Ruchirawat
- Laboratory
of Medicinal Chemistry, Chulabhorn Research Institute, and Program in Chemical
Biology, Chulabhorn Graduate Institute,
54 Kamphaeng Phet 6, Talat Bangken, Laksi, Bangkok, Thailand 10210
- Center of
Excellence on Environmental
Health and Toxicology, Commission on Higher Education (CHE), Ministry of Education, Thailand
| | - Poonsakdi Ploypradith
- Laboratory
of Medicinal Chemistry, Chulabhorn Research Institute, and Program in Chemical
Biology, Chulabhorn Graduate Institute,
54 Kamphaeng Phet 6, Talat Bangken, Laksi, Bangkok, Thailand 10210
- Center of
Excellence on Environmental
Health and Toxicology, Commission on Higher Education (CHE), Ministry of Education, Thailand
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15
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Ishikura M, Abe T, Choshi T, Hibino S. Simple indole alkaloids and those with a non-rearranged monoterpenoid unit. Nat Prod Rep 2013; 30:694-752. [DOI: 10.1039/c3np20118j] [Citation(s) in RCA: 269] [Impact Index Per Article: 22.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
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16
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17
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Evano G, Theunissen C, Pradal A. Impact of copper-catalyzed cross-coupling reactions in natural product synthesis: the emergence of new retrosynthetic paradigms. Nat Prod Rep 2013; 30:1467-89. [DOI: 10.1039/c3np70071b] [Citation(s) in RCA: 90] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
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18
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Tébéka IRM, Longato GB, Craveiro MV, de Carvalho JE, Ruiz ALTG, Silva LF. Total Synthesis of (+)-trans-Trikentrin A. Chemistry 2012; 18:16890-901. [DOI: 10.1002/chem.201202413] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2012] [Revised: 09/04/2012] [Indexed: 11/06/2022]
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19
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González M, Rodríguez RÁ, Cid MM, López CS. A stepwise retro-imino-ene as a key step in the mechanism of allene formation via the Crabbé acetylene homologation. J Comput Chem 2012; 33:1236-9. [PMID: 22389177 DOI: 10.1002/jcc.22954] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2011] [Revised: 01/24/2012] [Accepted: 01/24/2012] [Indexed: 11/11/2022]
Abstract
The mechanism of the acetylene homologation procedure accidentally discovered and further developed by Crabbé and coworkers is unknown. Kinetic isotope effect (KIE) experiments, however, suggest that an intramolecular hydrogen shift is the key step of the transformation. In this work, we present a computational study of this mechanism. We found that the reaction proceeds via an unexpected stepwise retro-imino-ene rearrangement. This mechanism justifies the role of Cu(I) as a reaction catalyst and is also compatible with the KIE experiments reported.
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Affiliation(s)
- Marta González
- Departamento de Química Orgánica, Facultade de Química, Universidade de Vigo, Lagoas, Marcosende, Vigo 36310, Spain
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20
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Saito N, Ichimaru T, Sato Y. Total synthesis of (-)-herbindoles A, B, and C via transition-metal-catalyzed intramolecular [2 + 2 + 2] cyclization between ynamide and diynes. Org Lett 2012; 14:1914-7. [PMID: 22452396 DOI: 10.1021/ol300571b] [Citation(s) in RCA: 55] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
Abstract
The total syntheses of (-)-herbindoles A, B, and C as naturally occurring forms were accomplished for the first time through transition-metal-catalyzed intramolecular [2 + 2 + 2] cyclization between ynamide and diynes. This strategy provided a highly efficient synthetic route to all three herbindoles from an identical indoline derivative as a common intermediate.
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Affiliation(s)
- Nozomi Saito
- Faculty of Pharmaceutical Sciences, Hokkaido University, Sapporo 060-0812, Japan.
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21
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Liu W, Lim HJ, RajanBabu TV. Asymmetric hydrovinylation of vinylindoles. A facile route to cyclopenta[g]indole natural products (+)-cis-trikentrin A and (+)-cis-trikentrin B. J Am Chem Soc 2012; 134:5496-9. [PMID: 22394308 DOI: 10.1021/ja3004733] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Vinylindoles undergo Ni(II)-catalyzed asymmetric hydrovinylation under very mild conditions (-78 °C, 1 atm ethylene, 4 mol % catalyst) to give the corresponding 2-but-3-enyl derivatives in excellent yields and enantioselectivities. Hydroboration of the alkene and oxidation to an acid, followed by Friedel-Crafts annulation, gives an indole-annulated cyclopentanone that is a suitable precursor for the syntheses of cis-trikentrins and all known herbindoles. For example, the cyclopentanone from 4-ethyl-7-vinylindole is converted into (+)-cis-trikentin A in four steps (Wittig reaction, alkene isomerization, diastereoselective hydrogenation, and nitrogen deprotection). The previous synthesis of this molecule from (S)-(-)-malic acid involved more than 20 steps and a preparative HPLC separation of diastereomeric intermediates.
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Affiliation(s)
- Wang Liu
- Department of Chemistry, The Ohio State University, Columbus, Ohio 43210, United States
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22
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Stoltz B, Motherwell W. Tetrahedron reports on organic chemistry. Tetrahedron 2011. [DOI: 10.1016/s0040-4020(11)00770-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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23
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Stoltz B, Motherwell W. Tetrahedron reports on organic chemistry. Tetrahedron 2010. [DOI: 10.1016/s0040-4020(10)01735-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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