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Zamysłowski T, Gorczyca K, Zhang Y, Poterała M, Malinowski M. Operationally simple enzymatic deprotection of C-3 position on 3,4,6-tri-O-acetyl-d-glucal. Carbohydr Res 2023; 529:108848. [PMID: 37224731 DOI: 10.1016/j.carres.2023.108848] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2023] [Revised: 05/05/2023] [Accepted: 05/16/2023] [Indexed: 05/26/2023]
Abstract
The new strategies to obtain selectively protected hydroxyl function on sugar derivatives are still of the high value for the progress of glycochemistry and organic synthesis. Herein, we describe an interesting enzymatic deprotection strategy that was applied to the most commonly used glycal derivative - 3,4,6-tri-O-acetyl-d-glucal. The procedure is operationally simple, easy to scale-up and the biocatalyst might be effortlessly recycled from the reaction mixture. Resulting product - 4,6-di-O-acetyl-D-glucal we then challenged to synthesize two glycal synthons armed with 3 different protecting group - a synthetic target difficult to achieve with traditional methods.
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Affiliation(s)
- Tomasz Zamysłowski
- Faculty of Chemistry, Warsaw University of Technology, Ul. Noakowskiego 3, 00-664, Warsaw, Poland
| | - Katarzyna Gorczyca
- Faculty of Chemistry, Warsaw University of Technology, Ul. Noakowskiego 3, 00-664, Warsaw, Poland
| | - Yuqing Zhang
- CY Cergy-Paris Université, BioCIS, CNRS, 5 Mail Gay-Lussac, 95000, Cergy-Pontoise cedex, France; Université Paris-Saclay, BioCIS, CNRS, 5, Rue J-B Clément, 92296, Châtenay-Malabry cedex, France
| | - Marcin Poterała
- Faculty of Chemistry, Warsaw University of Technology, Ul. Noakowskiego 3, 00-664, Warsaw, Poland
| | - Maciej Malinowski
- Faculty of Chemistry, Warsaw University of Technology, Ul. Noakowskiego 3, 00-664, Warsaw, Poland.
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2
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Sato K, Chiba A, Shiraishi T, Ogawa Y, Hara RI, Wada T. Solid-phase synthesis of N-trichloroacetyl mannosamine 1-phosphate repeating units Mimicking capsular polysaccharide derived from Neisseria meningitidis serotype A. Carbohydr Res 2022; 518:108585. [DOI: 10.1016/j.carres.2022.108585] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2021] [Revised: 05/06/2022] [Accepted: 05/09/2022] [Indexed: 11/02/2022]
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3
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Preparation of menisdaurigenin and related compounds. J Nat Med 2018; 73:236-243. [PMID: 30094599 DOI: 10.1007/s11418-018-1235-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2018] [Accepted: 07/31/2018] [Indexed: 10/28/2022]
Abstract
Menisdaurin (1), a cyano glucoside, was first isolated in 1978 from Menispermum dauricum (Menispermaceae) and named after the plant. It has been also isolated from several plant sources. The stereochemistry of the aglycone part was first reported as (Z,4R,6S)-enantiomer of (4,6-dihydroxy-2-cyclohexen-1-ylidene)acetonitrile based on the CD spectrum of menisdaurilide (2), the α,β-unsaturated γ-lactone obtained by an acid hydrolysis of menisdaurin. Later, the absolute stereochemistry was revised as (Z,4S,6R) by X-ray crystal analysis of 1 isolated from Saniculiphyllum guangxiens. The aglycone part of menisdaurin (1) has not been obtained from 1, because an acid hydrolysis of 1 gave menisdaurilide (2), and enzymatic hydrolysis with emulsin did not give the aglycone. On the other hand, a compound named coculauril (3) was isolated from Cocculus lauriforius. This compound has the same planner structure corresponding to the aglycone of 1, but the stereochemistry was reported to be (E,4R,6S). Here, we confirmed the absolute stereochemistry of 1 by Mosher's method to be (Z,4S,6R), and prepared the aglycone of 1, i.e., menisdaurigenin (4) by an enzymatic hydrolysis of 1. We also revealed that 4 is a different compound from 3 and unstable in water and MeOH.
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4
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Buttar S, Caine J, Goné E, Harris R, Gillman J, Atienza R, Gupta R, Sogi KM, Jain L, Abascal NC, Levine Y, Repka LM, Rojas CM. Glycal Metallanitrenes for 2-Amino Sugar Synthesis: Amidoglycosylation of Gulal-, Allal-, Glucal-, and Galactal 3-Carbamates. J Org Chem 2018; 83:8054-8080. [PMID: 29979042 PMCID: PMC6662188 DOI: 10.1021/acs.joc.8b00893] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
The rhodium(II)-catalyzed oxidative cyclization of glycal 3-carbamates with in situ incorporation of an alcohol nucleophile at the anomeric position provides access to a range of 2-amino sugars having 1,2-trans-2,3-cis stereochemistry, a structural motif present in compounds of medicinal and biological significance such as the streptothricin group of antibiotics and the Chitinase inhibitor allosamidin. All of the diastereomeric d-glycal 3-carbamates have been investigated, revealing significant differences in anomeric stereoselectivity depending on substrate stereochemistry and protecting groups. In addition, some substrates were prone to forming C3-oxidized dihydropyranone byproducts under the reaction conditions. Allal- and gulal 3-carbamates provided uniformly high stereo- and chemoselectivity, while for glucal substrates, acyclic, electron-withdrawing protecting groups at the 4 O and 6 O positions were required. Galactal 3-carbamates have been the most challenging substrates; formation of their amidoglycosylation products is most effective with an electron-withdrawing 6 O-Ts substituent and a sterically demanding 4 O-TBS group. These results suggest a mechanism whereby conformational and electronic factors determine the partitioning of an intermediate acyl nitrenoid between alkene addition, leading to amidoglycosylation, and C3-H insertion, providing the dihydropyranone byproduct. Along the amidoglycosylation pathway, high anomeric selectivity results when a glycosyl aziridine intermediate is favored over an aziridine-opened oxocarbenium donor.
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Affiliation(s)
- Simran Buttar
- Department of Chemistry, Barnard College, 3009 Broadway, New York, New York 10027, United States
| | - Julia Caine
- Department of Chemistry, Barnard College, 3009 Broadway, New York, New York 10027, United States
| | - Evelyne Goné
- Department of Chemistry, Barnard College, 3009 Broadway, New York, New York 10027, United States
| | - Reneé Harris
- Department of Chemistry, Barnard College, 3009 Broadway, New York, New York 10027, United States
| | - Jennifer Gillman
- Department of Chemistry, Barnard College, 3009 Broadway, New York, New York 10027, United States
| | - Roxanne Atienza
- Department of Chemistry, Barnard College, 3009 Broadway, New York, New York 10027, United States
| | - Ritu Gupta
- Department of Chemistry, Barnard College, 3009 Broadway, New York, New York 10027, United States
| | - Kimberly M. Sogi
- Department of Chemistry, Barnard College, 3009 Broadway, New York, New York 10027, United States
| | - Lauren Jain
- Department of Chemistry, Barnard College, 3009 Broadway, New York, New York 10027, United States
| | - Nadia C. Abascal
- Department of Chemistry, Barnard College, 3009 Broadway, New York, New York 10027, United States
| | - Yetta Levine
- Department of Chemistry, Barnard College, 3009 Broadway, New York, New York 10027, United States
| | - Lindsay M. Repka
- Department of Chemistry, Barnard College, 3009 Broadway, New York, New York 10027, United States
| | - Christian M. Rojas
- Department of Chemistry, Barnard College, 3009 Broadway, New York, New York 10027, United States
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5
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Synthesis of densely functionalized cispentacin derivatives through selective aziridination and aziridine opening reactions: orthogonally protected di- and triaminocyclopentanecarboxylates. Tetrahedron 2014. [DOI: 10.1016/j.tet.2014.09.071] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
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6
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Chemoenzymatic synthesis of sialosides containing C7-modified sialic acids and their application in sialidase substrate specificity studies. Carbohydr Res 2014; 389:100-11. [PMID: 24680514 DOI: 10.1016/j.carres.2014.02.021] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2013] [Accepted: 02/20/2014] [Indexed: 01/12/2023]
Abstract
Modifications at the glycerol side chain of sialic acid in sialosides modulate their recognition by sialic acid-binding proteins and sialidases. However, limited work has been focused on the synthesis and functional studies of sialosides with C7-modified sialic acids. Here we report chemical synthesis of C4-modified ManNAc and mannose and their application as sialic acid precursors in a highly efficient one-pot three-enzyme system for chemoenzymatic synthesis of α2-3- and α2-6-linked sialyl para-nitrophenyl galactosides in which the C7-hydroxyl group in sialic acid (N-acetylneuraminic acid, Neu5Ac, or 2-keto-3-deoxynonulosonic acid, Kdn) was systematically substituted by -F, -OMe, -H, and -N3 groups. Substrate specificity study of bacterial and human sialidases using the obtained sialoside library containing C7-modified sialic acids showed that sialosides containing C7-deoxy Neu5Ac were selective substrates for all bacterial sialidases tested but not for human NEU2. The information obtained from sialidase substrate specificity can be used to guide the design of new inhibitors that are selective against bacterial sialidases.
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7
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Kiss L, Fülöp F. Synthesis of carbocyclic and heterocyclic β-aminocarboxylic acids. Chem Rev 2013; 114:1116-69. [PMID: 24299148 DOI: 10.1021/cr300454h] [Citation(s) in RCA: 148] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Loránd Kiss
- Institute of Pharmaceutical Chemistry, University of Szeged , H-6720 Szeged, Eötvös utca 6, Hungary
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8
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Ohba S, Okazaki H, Ueda Y, Hanaya K, Shoji M, Sugai T. (-)-Benzyl 2,3-dide-oxy-β-d-erythro-hex-2-eno-pyran-oside. Acta Crystallogr Sect E Struct Rep Online 2013; 69:o1811. [PMID: 24860294 PMCID: PMC4004438 DOI: 10.1107/s1600536813031140] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2013] [Accepted: 11/13/2013] [Indexed: 11/10/2022]
Abstract
In the title compound, C13H16O4, the six-membered ring of the sugar moiety shows a half-chair conformation. In the crystal, molecules are connected via O—H⋯O hydrogen bonds, forming columns around twofold screw axes along the b-axis direction. There is a disorder of the benzyloxy group, which has two possible orientations with the phenyl group lying on a common plane [site-occupancy factors = 0.589 (9) and 0.411 (9)].
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Affiliation(s)
- Shigeru Ohba
- Research and Education Center for Natural Sciences, Keio University, Hiyoshi 4-1-1, Kohoku-ku, Yokohama 223-8521, Japan
| | - Hayato Okazaki
- Department of Pharmaceutical Science, Keio University, Shibakoen 1-5-30, Minato-ku, Tokyo 105-8512, Japan
| | - Yuji Ueda
- Department of Pharmaceutical Science, Keio University, Shibakoen 1-5-30, Minato-ku, Tokyo 105-8512, Japan
| | - Kengo Hanaya
- Department of Pharmaceutical Science, Keio University, Shibakoen 1-5-30, Minato-ku, Tokyo 105-8512, Japan
| | - Mitsuru Shoji
- Department of Pharmaceutical Science, Keio University, Shibakoen 1-5-30, Minato-ku, Tokyo 105-8512, Japan
| | - Takeshi Sugai
- Department of Pharmaceutical Science, Keio University, Shibakoen 1-5-30, Minato-ku, Tokyo 105-8512, Japan
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9
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Okazaki H, Hanaya K, Shoji M, Hada N, Sugai T. A new route toward 2-acetamido-4-O-methyl-2-deoxy-d-mannopyranose from a Ferrier derivative of tri-O-acetyl-d-glucal, which contributes to aldolase-catalyzed synthesis of laninamivir (CS-8958). Tetrahedron 2013. [DOI: 10.1016/j.tet.2013.07.018] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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10
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Dharuman S, Gupta P, Kancharla PK, Vankar YD. Synthesis of 2-Nitroglycals from Glycals Using the Tetrabutylammonium Nitrate–Trifluoroacetic Anhydride–Triethylamine Reagent System and Base-Catalyzed Ferrier Rearrangement of Acetylated 2-Nitroglycals. J Org Chem 2013; 78:8442-50. [DOI: 10.1021/jo401165y] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Affiliation(s)
- Suresh Dharuman
- Department
of Chemistry, Indian Institute of Technology, Kanpur 208 016, India
| | - Preeti Gupta
- Department
of Chemistry, Indian Institute of Technology, Kanpur 208 016, India
| | - Pavan K. Kancharla
- Department
of Chemistry, Indian Institute of Technology, Kanpur 208 016, India
| | - Yashwant D. Vankar
- Department
of Chemistry, Indian Institute of Technology, Kanpur 208 016, India
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11
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Kiss L, Cherepanova M, Forró E, Fülöp F. A New Access Route to Functionalized Cispentacins from Norbornene β-Amino Acids. Chemistry 2012; 19:2102-7. [DOI: 10.1002/chem.201203183] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2012] [Revised: 11/13/2012] [Indexed: 01/30/2023]
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12
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Selective nitrile oxide dipolar cycloaddition for the synthesis of highly functionalized β-aminocyclohexanecarboxylate stereoisomers. Tetrahedron 2012. [DOI: 10.1016/j.tet.2012.09.085] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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13
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Kiss L, Forró E, Fülöp F. Selective syntheses of novel highly functionalized β-aminocyclohexanecarboxylic acids. Tetrahedron 2012. [DOI: 10.1016/j.tet.2011.12.065] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
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14
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Barbayianni E, Kokotos G. Biocatalyzed Regio- and Chemoselective Ester Cleavage: Synthesis of Bioactive Molecules. ChemCatChem 2012. [DOI: 10.1002/cctc.201200035] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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15
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Nonn M, Kiss L, Sillanpää R, Fülöp F. Synthesis of highly functionalized β-aminocyclopentanecarboxylate stereoisomers by reductive ring opening reaction of isoxazolines. Beilstein J Org Chem 2012; 8:100-6. [PMID: 22423276 PMCID: PMC3302068 DOI: 10.3762/bjoc.8.10] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2011] [Accepted: 12/23/2011] [Indexed: 11/23/2022] Open
Abstract
A rapid and simple procedure was devised for the synthesis of multifunctionalized cyclic β-amino esters and γ-amino alcohols via the 1,3-dipolar cycloaddition of nitrile oxides to β-aminocyclopentenecarboxylates. The opening of the isoxazoline reductive ring to the corresponding highly functionalized 2-aminocyclopentanecarboxylates occurred stereoselectively with good yields.
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Affiliation(s)
- Melinda Nonn
- Institute of Pharmaceutical Chemistry, University of Szeged, Eötvös u. 6, H-6720 Szeged, Hungary
| | - Loránd Kiss
- Institute of Pharmaceutical Chemistry, University of Szeged, Eötvös u. 6, H-6720 Szeged, Hungary
| | - Reijo Sillanpää
- Department of Chemistry, University of Jyväskylä, FIN-40014 Jyväskylä, Finland
| | - Ferenc Fülöp
- Institute of Pharmaceutical Chemistry, University of Szeged, Eötvös u. 6, H-6720 Szeged, Hungary
- Stereochemistry Research Group of the Hungarian Academy of Sciences, University of Szeged, Eötvös u. 6, H-6720 Szeged, Hungary
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16
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Total Synthesis of Sialic Acid by a Sequential Rhodium-Catalyzed Aziridination and Barbier Allylation of D-Glycal. Angew Chem Int Ed Engl 2011. [DOI: 10.1002/ange.201104516] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
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17
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Lorpitthaya R, Suryawanshi SB, Wang S, Pasunooti KK, Cai S, Ma J, Liu XW. Total Synthesis of Sialic Acid by a Sequential Rhodium-Catalyzed Aziridination and Barbier Allylation of D-Glycal. Angew Chem Int Ed Engl 2011; 50:12054-7. [DOI: 10.1002/anie.201104516] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2011] [Revised: 09/09/2011] [Indexed: 12/15/2022]
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18
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19
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Brovetto M, Gamenara D, Méndez PS, Seoane GA. C-C bond-forming lyases in organic synthesis. Chem Rev 2011; 111:4346-403. [PMID: 21417217 DOI: 10.1021/cr100299p] [Citation(s) in RCA: 169] [Impact Index Per Article: 12.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Affiliation(s)
- Margarita Brovetto
- Grupo de Fisicoquímica Orgánica y Bioprocesos, Departamento de Química Orgánica, DETEMA, Facultad de Química, Universidad de la República (UdelaR), Gral. Flores 2124, 11800 Montevideo, Uruguay
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