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Ponomarev AV, Danilkina NA, Okuneva JS, Vidyakina AA, Khmelevskaya EA, Bunev AS, Rumyantsev AM, Govdi AI, Suarez T, Alabugin IV, Balova IA. Facile synthesis of diiodoheteroindenes and understanding their Sonogashira cross-coupling selectivity for the construction of unsymmetrical enediynes. Org Biomol Chem 2024; 22:4096-4107. [PMID: 38695707 DOI: 10.1039/d4ob00530a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/23/2024]
Abstract
Electrophile-promoted cyclizations of functionalized alkynes offer a useful tool for constructing halogen-substituted heterocycles primed for further derivatization. Preinstallation of an iodo-substituent at the alkyne prior to iodo-cyclization opens access to ortho di-iodinated heterocyclic precursors for the preparation of unsymmetrical heterocycle-fused enediynes. This general approach was used to prepare 2,3-diiodobenzothiophene, 2,3-diiodoindole, and 2,3-diiodobenzofuran, a useful family of substrates for systematic studies of the role of heteroatoms on the regioselectivity of cross-coupling reactions. Diiodobenzothiophene showed much higher regioselectivity for Sonogashira cross-coupling at C2 than diiodoindole and diiodobenzofuran. As a result, benzothiophene can be conveniently involved in a one-pot sequential coupling with two different alkynes, yielding unsymmetrical benzothiophene-fused enediynes. On the other hand, the Sonogashira reaction of diiodoindole and diiodobenzofuran formed considerable amounts of di-substituted enediynes in addition to the monoalkyne product by coupling at C2. Interestingly, no C3-monocoupling products were observed for all of the diiodides, suggesting that the incorporation of the 1st alkyne at C2 activates the C3 position for the 2nd coupling. Additional factors affecting regioselectivity were detected, discussed and connected, through computational analysis, to transmetalation being the rate-determining step for the Sonogashira reaction. Several enediynes synthesized showed cytotoxic activity, which is not associated with DNA strand breaks typical of natural enediyne antibiotics.
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Affiliation(s)
- Alexander V Ponomarev
- Institute of Chemistry, Saint Petersburg State University (SPbU), Saint Petersburg, 199034, Russia.
| | - Natalia A Danilkina
- Institute of Chemistry, Saint Petersburg State University (SPbU), Saint Petersburg, 199034, Russia.
| | - Julia S Okuneva
- Institute of Chemistry, Saint Petersburg State University (SPbU), Saint Petersburg, 199034, Russia.
| | - Aleksandra A Vidyakina
- Institute of Chemistry, Saint Petersburg State University (SPbU), Saint Petersburg, 199034, Russia.
| | - Ekaterina A Khmelevskaya
- Institute of Chemistry, Saint Petersburg State University (SPbU), Saint Petersburg, 199034, Russia.
| | - Alexander S Bunev
- Medicinal Chemistry Center, Tolyatti State University, 445020 Tolyatti, Russia
| | - Andrey M Rumyantsev
- Department of Genetics and Biotechnology, Saint Petersburg State University (SPbU), Saint Petersburg, 199034, Russia
| | - Anastasia I Govdi
- Institute of Chemistry, Saint Petersburg State University (SPbU), Saint Petersburg, 199034, Russia.
| | - Thomas Suarez
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee, FL 32306, USA.
| | - Igor V Alabugin
- Department of Chemistry and Biochemistry, Florida State University, Tallahassee, FL 32306, USA.
| | - Irina A Balova
- Institute of Chemistry, Saint Petersburg State University (SPbU), Saint Petersburg, 199034, Russia.
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Fang S, Chen W, Jiang H, Ma R, Wu W. Palladium-catalyzed oxidative C-H activation/annulation of N-alkylanilines with bromoalkynes: access to functionalized 3-bromoindoles. Chem Commun (Camb) 2022; 58:9666-9669. [PMID: 35946388 DOI: 10.1039/d2cc03298h] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A straightforward approach to the synthesis of 3-bromoindoles via palladium-catalyzed oxidative C-H activation/annulation of N-alkylanilines with bromoalkynes has been described. This protocol features high atom economy, excellent chemo- and regioselectivities, and good functional group tolerance. Moreover, the resultant 3-bromoindoles can be transformed to various functionalized indole derivatives, which demonstrates the practicability of this method in organic synthesis.
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Affiliation(s)
- Songjia Fang
- State Key Laboratory of Luminescent Materials and Devices, Key Laboratory of Functional Molecular Engineering of Guangdong Province, School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou 510640, China.
| | - Wenhao Chen
- State Key Laboratory of Luminescent Materials and Devices, Key Laboratory of Functional Molecular Engineering of Guangdong Province, School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou 510640, China.
| | - Huanfeng Jiang
- State Key Laboratory of Luminescent Materials and Devices, Key Laboratory of Functional Molecular Engineering of Guangdong Province, School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou 510640, China.
| | - Ruize Ma
- State Key Laboratory of Luminescent Materials and Devices, Key Laboratory of Functional Molecular Engineering of Guangdong Province, School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou 510640, China.
| | - Wanqing Wu
- State Key Laboratory of Luminescent Materials and Devices, Key Laboratory of Functional Molecular Engineering of Guangdong Province, School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou 510640, China.
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Abstract
AbstractPalladium-catalyzed cross-coupling reactions of polyhalogenated heterocycles provide a convenient access to multifold arylated and alkynylated ring systems with a broad spectrum of physical and medicinal properties. Products include thiophenes, selenophenes, pyrroles, indoles, furans, benzofurans, pyrazoles, pyridines, quinolines, pyrimidines, pyrazines, naphthyridines, quinoxalines, and others. The regioselectivity of the coupling reactions is controlled by a combination of electronic and steric parameters. While a number of couplings can be carried out essentially under standard conditions, others require the use of more sophisticated ligands and a thorough optimization of the conditions, such as solvent, temperature, or reaction time. The present Account provides a personalized overview of coupling reactions of polyhalogenated heterocycles.1 Introduction2 Thiophenes3 Selenophenes4 Pyrroles and Indoles5 Furans and Benzofurans6 Pyrazoles7 Pyridines8 Quinolines9 Pyrimidines and Pyrazines10 Naphthyridines and Quinoxalines11 Miscellaneous12 Conclusions
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Affiliation(s)
- Peter Langer
- Institut für Chemie, Universität Rostock
- Leibniz-Institut für Katalyse an der Universität Rostock e. V
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4
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Elumalai V, Hansen JH. Synthesis of 5,7-diarylindoles via Suzuki-Miyaura coupling in water. Org Biomol Chem 2021; 19:10343-10347. [PMID: 34812462 DOI: 10.1039/d1ob02058g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The synthesis of novel 5,7-diaryl and diheteroaryl indoles has been explored via efficient double Suzuki-Miyaura coupling. The method notably employs a low catalyst loading of Pd(PPh3)4 (1.5 mol%/coupling) and water as the reaction solvent to obtain 5,7-diarylated indoles without using N-protecting groups in up to 91% yield. The approach is also suitable for N-protected and 3-substituted indoles and constitutes an important green and convenient arylation strategy for the benzenoid ring of indoles. The synthesized diarylindoles are fluorescent.
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Affiliation(s)
- Vijayaragavan Elumalai
- Chemical Synthesis and Analysis Division, Department of Chemistry, UiT The Arctic University of Norway, Hansine Hansens veg 54, 9037 Tromsø, Norway.
| | - Jørn H Hansen
- Chemical Synthesis and Analysis Division, Department of Chemistry, UiT The Arctic University of Norway, Hansine Hansens veg 54, 9037 Tromsø, Norway.
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Abstract
AbstractOrganofluorine compounds have gained interest in the fields of pharmaceuticals, agrochemicals, diagnostics, materials, and catalysis. Suzuki–Miyaura coupling reactions of fluorinated arenes made a tremendous impact in chemical and biological research and made organofluorinated molecules more readily available. This review gives a brief summary of Suzuki–Miyaura coupling reactions of fluorinated benzene derivatives. In this context, various aspects, such as regioselectivity, efficiency, and applications, are discussed.1 Introduction2 Organofluorine Compounds3 Suzuki–Miyaura Reactions of Fluorohalobenzenes3.1 Fluorophthalates3.2 Reactions of Pentafluorohalobenzenes3.3 Tetrafluorohalobenzenes3.4 Trifluorohalobenzenes3.5 Difluorohalobenzenes3.6 Monofluorohalobenzenes3.7 Halo(trifluoromethyl)benzenes3.8 Trifluoromethyl Pyridines4 S Summary
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Affiliation(s)
- Peter Langer
- Institut für Chemie, Universität Rostock
- Leibniz-Institut für Katalyse an der Universität Rostock e. V
| | - Shoaib Iqbal
- Institut für Chemie, Universität Rostock
- Leibniz-Institut für Katalyse an der Universität Rostock e. V
- Department of Chemistry, COMSATS Institute of Information Technology
| | - Muhammad Sharif
- Institut für Chemie, Universität Rostock
- Leibniz-Institut für Katalyse an der Universität Rostock e. V
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Zinad DS, Mahal A, Al-Amiery A. An Efficient Synthesis of Novel Imidazo-Aminopyridinyl Derivatives from 2-Chloro-4-cyanopyridine. ORG PREP PROCED INT 2020. [DOI: 10.1080/00304948.2020.1767491] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Affiliation(s)
- Dhafer S. Zinad
- Applied Science Department, University of Technology, Baghdad, Iraq
| | - Ahmed Mahal
- Key Laboratory of Plant Resources Conservation and Sustainable Utilization and Guangdong Provincial Key Laboratory of Applied Botany, South China Botanical Garden, Chinese Academy of Sciences, Guangzhou, China
- Guangzhou HC Pharmaceutical Co., Ltd., Guangzhou, China
| | - Ahmed Al-Amiery
- Energy and Renewable Energies Technology Center, University of Technology, Baghdad, Iraq
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7
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Chirkova ZV, Filimonov SI, Abramov IG. C-3 Bromination of 1-Hydroxypyrrolo[3,4-f]indole-5,7-diones. RUSS J GEN CHEM+ 2019. [DOI: 10.1134/s1070363219060331] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Abstract
The compound 2′-chloro-4-(1-methyl-1H-imidazol-2-yl)-2,4′-bipyridine was obtained with a good yield by the reaction of 2-chloro-4-(1-methyl-1H-imidazol-2-yl)pyridine with (2-chloropyridin-4-yl)boronic acid and structurally characterized by nuclear magnetic resonance (1H-NMR and 13C-NMR), thin-layer chromatography–mass spectrometry (TLC–MS), HPLC, gas chromatography–mass spectrometry (GC–MS), and elemental analysis. The functionalization of the pyridine was achieved by the palladium-catalyzed Suzuki–Miyaura carbon–carbon cross-coupling reaction that afforded the target compound.
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Polák P, Tobrman T. The synthesis of polysubstituted indoles from 3-bromo-2-indolyl phosphates. Org Biomol Chem 2018; 15:6233-6241. [PMID: 28702629 DOI: 10.1039/c7ob01127j] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A novel methodology for the synthesis of functionalised indoles based on the cross-coupling reactions of 3-bromo-2-indolyl phosphates is described. The preparation involves the conversion of easily available 2-oxindoles to 3,3-dibromo-2-oxindoles followed by the Perkow reaction affording 3-bromo-2-indolyl phosphates. Then bromine atom is substituted regioselectively by the Suzuki coupling reaction. We observed that aluminum chloride promoted the reaction of 3-substituted-2-indolyl phosphates with organozinc reagents furnishing 2,3-disubstituted indoles as final products. The overall diversity and efficiency of the methodology was demonstrated by the synthesis of bioactive molecule from easily available substances.
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Affiliation(s)
- Peter Polák
- Department of Organic Chemistry, University of Chemistry and Technology, Prague, Technická 5, 166 28 Prague 6, Czech Republic.
| | - Tomáš Tobrman
- Department of Organic Chemistry, University of Chemistry and Technology, Prague, Technická 5, 166 28 Prague 6, Czech Republic.
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Kordić B, Kovačević M, Sloboda T, Vidović A, Jović B. FT-IR and NIR spectroscopic investigation of hydrogen bonding in indole-ether systems. J Mol Struct 2017. [DOI: 10.1016/j.molstruc.2017.05.035] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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11
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Almond-Thynne J, Blakemore DC, Pryde DC, Spivey AC. Site-selective Suzuki-Miyaura coupling of heteroaryl halides - understanding the trends for pharmaceutically important classes. Chem Sci 2017; 8:40-62. [PMID: 28451148 PMCID: PMC5304707 DOI: 10.1039/c6sc02118b] [Citation(s) in RCA: 126] [Impact Index Per Article: 15.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2016] [Accepted: 08/04/2016] [Indexed: 12/22/2022] Open
Abstract
Suzuki-Miyaura cross-coupling reactions of heteroaryl polyhalides with aryl boronates are surveyed. Drawing on data from literature sources as well as bespoke searches of Pfizer's global chemistry RKB and CAS Scifinder® databases, the factors that determine the site-selectivity of these reactions are discussed with a view to rationalising the trends found.
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Affiliation(s)
- Joshua Almond-Thynne
- Department of Chemistry , Imperial College London , South Kensington Campus , London , SW& 2AZ , UK .
| | - David C Blakemore
- Pfizer Worldwide Medicinal Chemistry , The Portway Building, Granta Park, Great Abington , Cambridge , CB21 6GS , UK
| | - David C Pryde
- Pfizer Worldwide Medicinal Chemistry , The Portway Building, Granta Park, Great Abington , Cambridge , CB21 6GS , UK
| | - Alan C Spivey
- Department of Chemistry , Imperial College London , South Kensington Campus , London , SW& 2AZ , UK .
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12
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Błachut D, Szawkało J, Czarnocki Z. A convenient route to symmetrically and unsymmetrically substituted 3,5-diaryl-2,4,6-trimethylpyridines via Suzuki-Miyaura cross-coupling reaction. Beilstein J Org Chem 2016; 12:835-45. [PMID: 27340474 PMCID: PMC4901938 DOI: 10.3762/bjoc.12.82] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2015] [Accepted: 04/08/2016] [Indexed: 12/25/2022] Open
Abstract
A series of differently substituted 3,5-diaryl-2,4,6-trimethylpyridines were prepared and characterized using the Suzuki-Miyaura coupling reaction with accordingly selected bromo-derivatives and arylboronic acids. The reaction conditions were carefully optimized allowing high yield of isolated products and also the construction of unsymmetrically substituted diarylpyridines, difficult to access by other methods.
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Affiliation(s)
- Dariusz Błachut
- Forensic Laboratory, Internal Security Agency, 1 Sierpnia 30A, 02-134 Warsaw, Poland, Tel.: +48 693830760
| | - Joanna Szawkało
- Faculty of Chemistry, University of Warsaw, Pasteura 1, 02-093 Warsaw, Poland
| | - Zbigniew Czarnocki
- Faculty of Chemistry, University of Warsaw, Pasteura 1, 02-093 Warsaw, Poland
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Zhao P, Young MD, Beaudry CM. Regioselective Suzuki couplings of non-symmetric dibromobenzenes: alkenes as regiochemical control elements. Org Biomol Chem 2015; 13:6162-5. [DOI: 10.1039/c5ob00717h] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The regioselective Suzuki coupling of dibromobenzenes has been investigated. The regiochemistry is high when one bromine atom is proximal to an alkene.
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14
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Cho HH, Kim SH. Scope and Limitations on the Site-selective Cross-couplings of Arylzincs with 2,3- and 2,5-Dibromothiophene. B KOREAN CHEM SOC 2014. [DOI: 10.5012/bkcs.2014.35.10.3081] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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15
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Liu C, Miao T, Zhang L, Li P, Zhang Y, Wang L. Palladium-Catalyzed Direct C2 Arylation ofN-Substituted Indoles with 1-Aryltriazenes. Chem Asian J 2014; 9:2584-9. [DOI: 10.1002/asia.201402274] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2014] [Indexed: 01/23/2023]
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