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Koshizuka M, Shinoda K, Makino K, Shimada N. Concise Synthesis of 2,5-Diketopiperazines via Catalytic Hydroxy-Directed Peptide Bond Formations. J Org Chem 2023. [PMID: 37125993 DOI: 10.1021/acs.joc.3c00195] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
2,5-Diketopiperazines (DKPs) with hydroxymethyl functional groups are essential structures found in many bioactive molecules and functional materials. We have established a simple protocol for the concise synthesis of this type of DKPs through diboronic acid anhydride-catalyzed hydroxy-directed peptide bond formations. The sequential reactions in this report, which consist of three steps, an intermolecular catalytic condensation reaction in which water is the only byproduct, a simple deprotection of the nitrogen-protecting group, and an intramolecular cyclization, enabled the synthesis of functionalized DKPs in high to excellent yields without any intermediate purification. The utility of this protocol has been demonstrated by synthesizing natural products, phomamide and Cyclo(Deala-l-Leu).
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Affiliation(s)
- Masayoshi Koshizuka
- Laboratory of Organic Chemistry for Drug Development and Medical Research Laboratories, Department of Pharmaceutical Sciences, Kitasato University, Tokyo 108-8641, Japan
| | - Kaito Shinoda
- Laboratory of Organic Chemistry for Drug Development and Medical Research Laboratories, Department of Pharmaceutical Sciences, Kitasato University, Tokyo 108-8641, Japan
| | - Kazuishi Makino
- Laboratory of Organic Chemistry for Drug Development and Medical Research Laboratories, Department of Pharmaceutical Sciences, Kitasato University, Tokyo 108-8641, Japan
| | - Naoyuki Shimada
- Laboratory of Organic Chemistry for Molecular Transformations, Department of Chemistry and the Institute of Natural Sciences, Nihon University, Tokyo 156-8550, Japan
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Ichitsuka T, Komatsuzaki S, Masuda K, Koumura N, Sato K, Kobayashi S. Stereoretentive N-Arylation of Amino Acid Esters with Cyclohexanones Utilizing a Continuous-Flow System. Chemistry 2021; 27:10844-10848. [PMID: 33909295 DOI: 10.1002/chem.202101439] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2021] [Indexed: 01/29/2023]
Abstract
The N-arylation of chiral amino acid esters with minimal racemization is a challenging transformation because of the sensitivity of the α-stereocenter. A versatile synthetic method was developed to prepare N-arylated amino acid esters using cyclohexanones as aryl sources under continuous-flow conditions. The designed flow system, which consists of a coil reactor and a packed-bed reactor containing a Pd(OH)2 /C catalyst, efficiently afforded the desired N-arylated amino acids without significant racemization, accompanied by only small amounts of easily removable co-products (i. e., H2 O and alkanes). The efficiency and robustness of this method allowed for the continuous synthesis of the desired product in very high yield and enantiopurity with high space-time yield (74.1 g L-1 h-1 ) and turnover frequency (5.9 h-1 ) for at least 3 days.
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Affiliation(s)
- Tomohiro Ichitsuka
- Interdisciplinary Research Center for Catalytic Chemistry, National Institute of Advanced Industrial Science and Technology (AIST), Central 5, Higashi 1-1-1, Tsukuba, Ibaraki, 305-8565, Japan.,Research Institute of Chemical Process Technology, National Institute of Advanced Industrial Science and Technology (AIST), Nigatake 4-2-1, Sendai, Miyagi, 983-8551, Japan
| | - Shingo Komatsuzaki
- Interdisciplinary Research Center for Catalytic Chemistry, National Institute of Advanced Industrial Science and Technology (AIST), Central 5, Higashi 1-1-1, Tsukuba, Ibaraki, 305-8565, Japan
| | - Koichiro Masuda
- Interdisciplinary Research Center for Catalytic Chemistry, National Institute of Advanced Industrial Science and Technology (AIST), Central 5, Higashi 1-1-1, Tsukuba, Ibaraki, 305-8565, Japan
| | - Nagatoshi Koumura
- Interdisciplinary Research Center for Catalytic Chemistry, National Institute of Advanced Industrial Science and Technology (AIST), Central 5, Higashi 1-1-1, Tsukuba, Ibaraki, 305-8565, Japan
| | - Kazuhiko Sato
- Interdisciplinary Research Center for Catalytic Chemistry, National Institute of Advanced Industrial Science and Technology (AIST), Central 5, Higashi 1-1-1, Tsukuba, Ibaraki, 305-8565, Japan
| | - Shū Kobayashi
- Interdisciplinary Research Center for Catalytic Chemistry, National Institute of Advanced Industrial Science and Technology (AIST), Central 5, Higashi 1-1-1, Tsukuba, Ibaraki, 305-8565, Japan.,Department of Chemistry, School of Science, The University of Tokyo Hongo, Bunkyo-ku, Tokyo, 113-0033, Japan
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Kim SW, Hume PA, Sperry J. Bioinspired Synthesis of the Furopyrazine Alkaloid Hyrtioseragamine A. J Org Chem 2021; 86:4779-4785. [PMID: 33686852 DOI: 10.1021/acs.joc.1c00174] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
A biosynthetic hypothesis proposed herein was used to guide the total synthesis of the marine-derived alkaloid hyrtioseragamine A. In the key biomimetic step, an enedione underwent acid-mediated isomerization-cyclodehydration to form the rare furopyrazine core of the natural product. The spectroscopic data for the synthetic sample is in full agreement with that described in the isolation report.
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Affiliation(s)
- Shi-Wei Kim
- School of Chemical Sciences, University of Auckland, 23 Symonds Street, Auckland 1010, New Zealand
| | - Paul A Hume
- School of Chemical and Physical Sciences, Victoria University of Wellington, and MacDiarmid Institute for Advanced Materials and Nanotechnology, Wellington 6010, New Zealand
| | - Jonathan Sperry
- School of Chemical Sciences, University of Auckland, 23 Symonds Street, Auckland 1010, New Zealand
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Takenaga N, Dohi T, China H, Kumar R. Azido, Cyano, and Nitrato Cyclic Hypervalent Iodine(III) Reagents in Heterocycle Synthesis. HETEROCYCLES 2021. [DOI: 10.3987/rev-20-sr(k)5] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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Affiliation(s)
- Takumi Abe
- Faculty of Pharmaceutical Sciences, Health Sciences University of Hokkaido
| | - Koji Yamada
- Faculty of Pharmaceutical Sciences, Health Sciences University of Hokkaido
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Maity A, Roy A, Das MK, De S, Naskar M, Bisai A. Oxidative cyanation of 2-oxindoles: formal total synthesis of (±)-gliocladin C. Org Biomol Chem 2020; 18:1679-1684. [PMID: 32052001 DOI: 10.1039/c9ob02752a] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Efficient oxidative direct cyanations of 3-alkyl/aryl 2-oxindoles using Cyano-1,2-BenziodoXol-3(1H)-one (CBX) (2a) have been reported under 'transition metal-free' conditions to synthesize a wide variety of 3-cyano 3-alkyl/aryl 2-oxindoles sharing an all-carbon quaternary center under additive-free conditions. The application of this process is shown by the formal total synthesis of (±)-gliocladin C (11c) in a few steps.
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Affiliation(s)
- Arindam Maity
- Department of Chemistry, Indian Institute of Science Education and Research Bhopal, Bhopal Bypass Road, Bhauri, Bhopal - 462 066, Madhya Pradesh, India.
| | - Avishek Roy
- Department of Chemistry, Indian Institute of Science Education and Research Bhopal, Bhopal Bypass Road, Bhauri, Bhopal - 462 066, Madhya Pradesh, India.
| | - Mrinal Kanti Das
- Department of Chemistry, Indian Institute of Science Education and Research Bhopal, Bhopal Bypass Road, Bhauri, Bhopal - 462 066, Madhya Pradesh, India.
| | - Subhadip De
- Department of Chemistry, Indian Institute of Science Education and Research Bhopal, Bhopal Bypass Road, Bhauri, Bhopal - 462 066, Madhya Pradesh, India.
| | - Malay Naskar
- Department of Chemistry, Indian Institute of Science Education and Research Bhopal, Bhopal Bypass Road, Bhauri, Bhopal - 462 066, Madhya Pradesh, India.
| | - Alakesh Bisai
- Department of Chemistry, Indian Institute of Science Education and Research Bhopal, Bhopal Bypass Road, Bhauri, Bhopal - 462 066, Madhya Pradesh, India. and Department of Chemical Sciences, Indian Institute of Science Education and Research Kolkata, Mohanpur, Nadia - 741 246, West Bengal, India.
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Abe T, Aoyama S, Ohmura M, Taniguchi M, Yamada K. Revisiting Furodiindolines: One-Pot Synthesis of Furodiindolines Using Indole 2,3-Epoxide Surrogates and Their Synthetic Applications. Org Lett 2019; 21:3367-3371. [PMID: 30997809 DOI: 10.1021/acs.orglett.9b01108] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Furodiindolines have emerged as versatile intermediates in various transformations, which are easily obtained from indole 2,3-epoxide surrogates via a one-pot procedure and allowed access to heterocyclic compounds with structural diversity and complexity. Four types of transformations from the furodiindolines have been achieved: (i) dehydrative rearrangement to afford 2,3'-biindoles, (ii) hydrolysis/cyclization to give 3,4-disubstituted quinolines, (iii) ring-opening/cyclization to give pyrroloindolines, and (iv) aminal cleavage to give a 3,3-disubstituted 2-oxindole.
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Affiliation(s)
- Takumi Abe
- Faculty of Pharmaceutical Sciences , Health Sciences University of Hokkaido , Ishikari-tobetsu, Hokkaido 0610293 , Japan
| | - Sakura Aoyama
- Faculty of Pharmaceutical Sciences , Health Sciences University of Hokkaido , Ishikari-tobetsu, Hokkaido 0610293 , Japan
| | - Masami Ohmura
- Faculty of Pharmaceutical Sciences , Health Sciences University of Hokkaido , Ishikari-tobetsu, Hokkaido 0610293 , Japan
| | - Masato Taniguchi
- Faculty of Pharmaceutical Sciences , Health Sciences University of Hokkaido , Ishikari-tobetsu, Hokkaido 0610293 , Japan
| | - Koji Yamada
- Faculty of Pharmaceutical Sciences , Health Sciences University of Hokkaido , Ishikari-tobetsu, Hokkaido 0610293 , Japan
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