1
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Li Y, Yue X, Li Z, Huang Z, Chen F. Asymmetric Synthesis of Sterically Hindered 1-Substituted Tetrahydro-β-carbolines Enabled by Imine Reductase: Enzyme Discovery, Protein Engineering, and Reaction Development. Org Lett 2023; 25:1285-1289. [PMID: 36802632 DOI: 10.1021/acs.orglett.3c00147] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/22/2023]
Abstract
We report the discovery of a new imine reductase (IRED), named AtIRED, by genome mining. Site-saturation mutagenesis on AtIRED generated two single mutants M118'L and P120'G and the double mutant M118'L/P120'G with improved specific activity toward sterically hindered 1-substituted dihydro-β-carbolines. The synthetic potential of these engineered IREDs was showcased by the preparative-scale synthesis of nine chiral 1-substituted tetrahydro-β-carbolines (THβCs), including (S)-1-t-butyl-THβC and (S)-1-t-pentyl-THβC, in 30-87% isolated yields with excellent optical purities (98-99% ee).
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Affiliation(s)
- Yitong Li
- Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University, Chengdu 610041, P.R. China
| | - Xiaoping Yue
- Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University, Chengdu 610041, P.R. China
| | - Zhining Li
- Department of Chemistry, Engineering Center of Catalysis and Synthesis for Chiral Molecules, Fudan University, Shanghai Engineering Research Center of Industrial Asymmetric Cataly sis of Chiral Drugs, 220 Handan Road, Shanghai 200433, P.R. China
| | - Zedu Huang
- Department of Chemistry, Engineering Center of Catalysis and Synthesis for Chiral Molecules, Fudan University, Shanghai Engineering Research Center of Industrial Asymmetric Cataly sis of Chiral Drugs, 220 Handan Road, Shanghai 200433, P.R. China
| | - Fener Chen
- Sichuan Research Center for Drug Precision Industrial Technology, West China School of Pharmacy, Sichuan University, Chengdu 610041, P.R. China.,Department of Chemistry, Engineering Center of Catalysis and Synthesis for Chiral Molecules, Fudan University, Shanghai Engineering Research Center of Industrial Asymmetric Cataly sis of Chiral Drugs, 220 Handan Road, Shanghai 200433, P.R. China
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2
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Zhu J, Yang L, Wu J, Deng Z, Qu X. Engineering Imine Reductase for Efficient Biosynthesis of 1-Aryl-Tetrahydro-β-Carbolines and Their N-Methylation Products. ACS Catal 2022. [DOI: 10.1021/acscatal.1c06012] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Affiliation(s)
- Jinmei Zhu
- Collaborative Innovation Center of Yangtze River Delta Region Green Pharmaceuticals, Zhejiang University of Technology, Hangzhou 310014, Zhejiang, China
- Key Laboratory of Combinatorial Biosynthesis and Drug Discovery Ministry of Education, School of Pharmaceutical Sciences, Wuhan University, Wuhan 430071, China
| | - Lu Yang
- Key Laboratory of Combinatorial Biosynthesis and Drug Discovery Ministry of Education, School of Pharmaceutical Sciences, Wuhan University, Wuhan 430071, China
- State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, 200240 Shanghai, China
| | - Jiequn Wu
- Collaborative Innovation Center of Yangtze River Delta Region Green Pharmaceuticals, Zhejiang University of Technology, Hangzhou 310014, Zhejiang, China
| | - Zixin Deng
- Key Laboratory of Combinatorial Biosynthesis and Drug Discovery Ministry of Education, School of Pharmaceutical Sciences, Wuhan University, Wuhan 430071, China
- State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, 200240 Shanghai, China
| | - Xudong Qu
- Key Laboratory of Combinatorial Biosynthesis and Drug Discovery Ministry of Education, School of Pharmaceutical Sciences, Wuhan University, Wuhan 430071, China
- State Key Laboratory of Microbial Metabolism and School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, 200240 Shanghai, China
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3
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Cigan E, Eggbauer B, Schrittwieser JH, Kroutil W. The role of biocatalysis in the asymmetric synthesis of alkaloids - an update. RSC Adv 2021; 11:28223-28270. [PMID: 35480754 PMCID: PMC9038100 DOI: 10.1039/d1ra04181a] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2021] [Accepted: 07/30/2021] [Indexed: 12/19/2022] Open
Abstract
Alkaloids are a group of natural products with interesting pharmacological properties and a long history of medicinal application. Their complex molecular structures have fascinated chemists for decades, and their total synthesis still poses a considerable challenge. In a previous review, we have illustrated how biocatalysis can make valuable contributions to the asymmetric synthesis of alkaloids. The chemo-enzymatic strategies discussed therein have been further explored and improved in recent years, and advances in amine biocatalysis have vastly expanded the opportunities for incorporating enzymes into synthetic routes towards these important natural products. The present review summarises modern developments in chemo-enzymatic alkaloid synthesis since 2013, in which the biocatalytic transformations continue to take an increasingly 'central' role.
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Affiliation(s)
- Emmanuel Cigan
- Institute of Chemistry, University of Graz, NAWI Graz, BioTechMed Graz, BioHealth Heinrichstrasse 28/II 8010 Graz Austria
| | - Bettina Eggbauer
- Institute of Chemistry, University of Graz, NAWI Graz, BioTechMed Graz, BioHealth Heinrichstrasse 28/II 8010 Graz Austria
| | - Joerg H Schrittwieser
- Institute of Chemistry, University of Graz, NAWI Graz, BioTechMed Graz, BioHealth Heinrichstrasse 28/II 8010 Graz Austria
| | - Wolfgang Kroutil
- Institute of Chemistry, University of Graz, NAWI Graz, BioTechMed Graz, BioHealth Heinrichstrasse 28/II 8010 Graz Austria
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4
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Sathish M, Nachtigall FM, Santos LS. Bifunctional thiosquaramide catalyzed asymmetric reduction of dihydro-β-carbolines and enantioselective synthesis of (-)-coerulescine and (-)-horsfiline by oxidative rearrangement. RSC Adv 2020; 10:38672-38677. [PMID: 35517527 PMCID: PMC9057260 DOI: 10.1039/d0ra07705d] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2020] [Accepted: 10/15/2020] [Indexed: 12/11/2022] Open
Abstract
Tetrahydro-β-carboline (THBC) is a tricyclic ring system that can be found in a large number of bioactive alkaloids. Herein, we report a simple and efficient method for the synthesis of enantiopure THBCs through a chiral thiosquaramide (11b) catalyzed imine reduction of dihydro-β-carbolines (17a-f). The in situ generated Pd-H employed as hydride source in the reaction of differently substituted chiral THBCs (18a-f) afforded high selectivities (R isomers, up to 96% ee) and good isolated yields (up to 88%). Moreover, the chiral thiosquaramide used also afforded exceptional catalyst activity in the syntheses of (-)-coerulescine (5) and (-)-horsfiline (6) with excellent enantioselectivities up to 98% and 93% ee, respectively, via an enantioselective oxidative rearrangement approach.
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Affiliation(s)
- Manda Sathish
- Laboratory of Asymmetric Synthesis, Chemistry Institute of Natural Resources, Universidad de Talca Casilla 747 3460000 Talca Chile
- Núcleo Científico Multidisciplinario-DI, Universidad de Talca Casilla 747 3460000 Talca Chile
| | - Fabiane M Nachtigall
- Instituto de Ciencias Químicas Aplicadas, Universidad Autónoma de Chile Talca 3467987 Chile
| | - Leonardo S Santos
- Laboratory of Asymmetric Synthesis, Chemistry Institute of Natural Resources, Universidad de Talca Casilla 747 3460000 Talca Chile
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5
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Glinsky-Olivier N, Yang S, Retailleau P, Gandon V, Guinchard X. Enantioselective Gold-Catalyzed Pictet–Spengler Reaction. Org Lett 2019; 21:9446-9451. [DOI: 10.1021/acs.orglett.9b03656] [Citation(s) in RCA: 36] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Affiliation(s)
- Nicolas Glinsky-Olivier
- Institut de Chimie des Substances Naturelles, CNRS UPR 2301, Université Paris-Sud, Université Paris-Saclay, 1 avenue de la Terrasse, Gif-sur-Yvette 91198, France
| | - Shengwen Yang
- Institut de Chimie Moléculaire et des Matériaux d’Orsay, CNRS UMR 8182, Université Paris-Sud, Université Paris-Saclay, Bâtiment 420, Orsay CEDEX 91405, France
- Laboratoire de Chimie Moléculaire (LCM), CNRS UMR 9168, Ecole Polytechnique, IP Paris, route de Saclay, Palaiseau CEDEX 91128, France
| | - Pascal Retailleau
- Institut de Chimie des Substances Naturelles, CNRS UPR 2301, Université Paris-Sud, Université Paris-Saclay, 1 avenue de la Terrasse, Gif-sur-Yvette 91198, France
| | - Vincent Gandon
- Institut de Chimie Moléculaire et des Matériaux d’Orsay, CNRS UMR 8182, Université Paris-Sud, Université Paris-Saclay, Bâtiment 420, Orsay CEDEX 91405, France
- Laboratoire de Chimie Moléculaire (LCM), CNRS UMR 9168, Ecole Polytechnique, IP Paris, route de Saclay, Palaiseau CEDEX 91128, France
| | - Xavier Guinchard
- Institut de Chimie des Substances Naturelles, CNRS UPR 2301, Université Paris-Sud, Université Paris-Saclay, 1 avenue de la Terrasse, Gif-sur-Yvette 91198, France
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6
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Pressnitz D, Fischereder E, Pletz J, Kofler C, Hammerer L, Hiebler K, Lechner H, Richter N, Eger E, Kroutil W. Asymmetric Synthesis of (
R
)‐1‐Alkyl‐Substituted Tetrahydro‐ß‐carbolines Catalyzed by Strictosidine Synthases. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201803372] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Desiree Pressnitz
- Department of Chemistry, Organic und Bioorganic ChemistryUniversity of Graz, NAWI Graz, BioTechMed Graz Heinrichstrasse 28 8010 Graz Austria
| | - Eva‐Maria Fischereder
- Department of Chemistry, Organic und Bioorganic ChemistryUniversity of Graz, NAWI Graz, BioTechMed Graz Heinrichstrasse 28 8010 Graz Austria
| | - Jakob Pletz
- Department of Chemistry, Organic und Bioorganic ChemistryUniversity of Graz, NAWI Graz, BioTechMed Graz Heinrichstrasse 28 8010 Graz Austria
| | - Christina Kofler
- Department of Chemistry, Organic und Bioorganic ChemistryUniversity of Graz, NAWI Graz, BioTechMed Graz Heinrichstrasse 28 8010 Graz Austria
| | - Lucas Hammerer
- Department of Chemistry, Organic und Bioorganic ChemistryUniversity of Graz, NAWI Graz, BioTechMed Graz Heinrichstrasse 28 8010 Graz Austria
- ACIB GmbH—Austrian Center of Industrial Biotechnology Petersgasse 14 8010 Graz Austria
| | - Katharina Hiebler
- Department of Chemistry, Organic und Bioorganic ChemistryUniversity of Graz, NAWI Graz, BioTechMed Graz Heinrichstrasse 28 8010 Graz Austria
| | - Horst Lechner
- Department of Chemistry, Organic und Bioorganic ChemistryUniversity of Graz, NAWI Graz, BioTechMed Graz Heinrichstrasse 28 8010 Graz Austria
| | - Nina Richter
- ACIB GmbH—Austrian Center of Industrial Biotechnology Petersgasse 14 8010 Graz Austria
| | - Elisabeth Eger
- Department of Chemistry, Organic und Bioorganic ChemistryUniversity of Graz, NAWI Graz, BioTechMed Graz Heinrichstrasse 28 8010 Graz Austria
| | - Wolfgang Kroutil
- Department of Chemistry, Organic und Bioorganic ChemistryUniversity of Graz, NAWI Graz, BioTechMed Graz Heinrichstrasse 28 8010 Graz Austria
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7
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Pressnitz D, Fischereder E, Pletz J, Kofler C, Hammerer L, Hiebler K, Lechner H, Richter N, Eger E, Kroutil W. Asymmetric Synthesis of (R)-1-Alkyl-Substituted Tetrahydro-ß-carbolines Catalyzed by Strictosidine Synthases. Angew Chem Int Ed Engl 2018; 57:10683-10687. [PMID: 29852524 PMCID: PMC6146909 DOI: 10.1002/anie.201803372] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2018] [Revised: 05/15/2018] [Indexed: 01/18/2023]
Abstract
Stereoselective methods for the synthesis of tetrahydro-ß-carbolines are of significant interest due to the broad spectrum of biological activity of the target molecules. In the plant kingdom, strictosidine synthases catalyze the C-C coupling through a Pictet-Spengler reaction of tryptamine and secologanin to exclusively form the (S)-configured tetrahydro-ß-carboline (S)-strictosidine. Investigating the biocatalytic Pictet-Spengler reaction of tryptamine with small-molecular-weight aliphatic aldehydes revealed that the strictosidine synthases give unexpectedly access to the (R)-configured product. Developing an efficient expression method for the enzyme allowed the preparative transformation of various aldehydes, giving the products with up to >98 % ee. With this tool in hand, a chemoenzymatic two-step synthesis of (R)-harmicine was achieved, giving (R)-harmicine in 67 % overall yield in optically pure form.
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Affiliation(s)
- Desiree Pressnitz
- Department of Chemistry, Organic und Bioorganic ChemistryUniversity of Graz, NAWI Graz, BioTechMed GrazHeinrichstrasse 288010GrazAustria
| | - Eva‐Maria Fischereder
- Department of Chemistry, Organic und Bioorganic ChemistryUniversity of Graz, NAWI Graz, BioTechMed GrazHeinrichstrasse 288010GrazAustria
| | - Jakob Pletz
- Department of Chemistry, Organic und Bioorganic ChemistryUniversity of Graz, NAWI Graz, BioTechMed GrazHeinrichstrasse 288010GrazAustria
| | - Christina Kofler
- Department of Chemistry, Organic und Bioorganic ChemistryUniversity of Graz, NAWI Graz, BioTechMed GrazHeinrichstrasse 288010GrazAustria
| | - Lucas Hammerer
- Department of Chemistry, Organic und Bioorganic ChemistryUniversity of Graz, NAWI Graz, BioTechMed GrazHeinrichstrasse 288010GrazAustria
- ACIB GmbH—Austrian Center of Industrial BiotechnologyPetersgasse 148010GrazAustria
| | - Katharina Hiebler
- Department of Chemistry, Organic und Bioorganic ChemistryUniversity of Graz, NAWI Graz, BioTechMed GrazHeinrichstrasse 288010GrazAustria
| | - Horst Lechner
- Department of Chemistry, Organic und Bioorganic ChemistryUniversity of Graz, NAWI Graz, BioTechMed GrazHeinrichstrasse 288010GrazAustria
| | - Nina Richter
- ACIB GmbH—Austrian Center of Industrial BiotechnologyPetersgasse 148010GrazAustria
| | - Elisabeth Eger
- Department of Chemistry, Organic und Bioorganic ChemistryUniversity of Graz, NAWI Graz, BioTechMed GrazHeinrichstrasse 288010GrazAustria
| | - Wolfgang Kroutil
- Department of Chemistry, Organic und Bioorganic ChemistryUniversity of Graz, NAWI Graz, BioTechMed GrazHeinrichstrasse 288010GrazAustria
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8
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Li H, Luan ZJ, Zheng GW, Xu JH. Efficient Synthesis of Chiral Indolines using an Imine Reductase from Paenibacillus lactis. Adv Synth Catal 2015. [DOI: 10.1002/adsc.201500160] [Citation(s) in RCA: 56] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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9
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10
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Gamenara D, Domínguez de María P. Enantioselective imine reduction catalyzed by imine reductases and artificial metalloenzymes. Org Biomol Chem 2015; 12:2989-92. [PMID: 24695640 DOI: 10.1039/c3ob42205d] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Adding value to organic synthesis. Novel imine reductases enable the enantioselective reduction of imines to afford optically active amines. Likewise, novel bioinspired artificial metalloenzymes can perform the same reaction as well. Emerging proof-of-concepts are herein discussed.
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Affiliation(s)
- Daniela Gamenara
- Organic Chemistry Department, Universidad de la República (UdelaR), Gral. Flores 2124, 11800 Montevideo, Uruguay.
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11
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Hussain S, Leipold F, Man H, Wells E, France SP, Mulholland KR, Grogan G, Turner NJ. An ( R)-Imine Reductase Biocatalyst for the Asymmetric Reduction of Cyclic Imines. ChemCatChem 2015; 7:579-583. [PMID: 27547270 PMCID: PMC4973613 DOI: 10.1002/cctc.201402797] [Citation(s) in RCA: 109] [Impact Index Per Article: 10.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2014] [Revised: 11/10/2014] [Indexed: 11/12/2022]
Abstract
Although the range of biocatalysts available for the synthesis of enantiomerically pure chiral amines continues to expand, few existing methods provide access to secondary amines. To address this shortcoming, we have over‐expressed the gene for an (R)‐imine reductase [(R)‐IRED] from Streptomyces sp. GF3587 in Escherichia coli to create a recombinant whole‐cell biocatalyst for the asymmetric reduction of prochiral imines. The (R)‐IRED was screened against a panel of cyclic imines and two iminium ions and was shown to possess high catalytic activity and enantioselectivity. Preparative‐scale synthesis of the alkaloid (R)‐coniine (90 % yield; 99 % ee) from the imine precursor was performed on a gram‐scale. A homology model of the enzyme active site, based on the structure of a closely related (R)‐IRED from Streptomyces kanamyceticus, was constructed and used to identify potential amino acids as targets for mutagenesis.
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Affiliation(s)
- Shahed Hussain
- School of Chemistry, University of Manchester, Manchester Institute of Biotechnology, 131 Princess Street, Manchester, M1 7DN (UK)
| | - Friedemann Leipold
- School of Chemistry, University of Manchester, Manchester Institute of Biotechnology, 131 Princess Street, Manchester, M1 7DN (UK)
| | - Henry Man
- Department of Chemistry, University of York, Heslington, York, YO10 5DD (UK)
| | - Elizabeth Wells
- Department of Chemistry, University of York, Heslington, York, YO10 5DD (UK)
| | - Scott P France
- School of Chemistry, University of Manchester, Manchester Institute of Biotechnology, 131 Princess Street, Manchester, M1 7DN (UK)
| | - Keith R Mulholland
- Chemical Development, AstraZeneca, Silk Rd Business Park, Macclesfield SK10 2NA (UK)
| | - Gideon Grogan
- Department of Chemistry, University of York, Heslington, York, YO10 5DD (UK)
| | - Nicholas J Turner
- School of Chemistry, University of Manchester, Manchester Institute of Biotechnology, 131 Princess Street, Manchester, M1 7DN (UK)
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12
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Guan Z, Chen YL, Yuan Y, Song J, Yang DC, Xue Y, He YH. Earthworm is a versatile and sustainable biocatalyst for organic synthesis. PLoS One 2014; 9:e105284. [PMID: 25148527 PMCID: PMC4141794 DOI: 10.1371/journal.pone.0105284] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2014] [Accepted: 07/23/2014] [Indexed: 11/20/2022] Open
Abstract
A crude extract of earthworms was used as an eco-friendly, environmentally benign, and easily accessible biocatalyst for various organic synthesis including the asymmetric direct aldol and Mannich reactions, Henry and Biginelli reactions, direct three-component aza-Diels-Alder reactions for the synthesis of isoquinuclidines, and domino reactions for the synthesis of coumarins. Most of these reactions have never before seen in nature, and moderate to good enantioselectivities in aldol and Mannich reactions were obtained with this earthworm catalyst. The products can be obtained in preparatively useful yields, and the procedure does not require any additional cofactors or special equipment. This work provides an example of a practical way to use sustainable catalysts from nature.
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Affiliation(s)
- Zhi Guan
- School of Chemistry and Chemical Engineering, Southwest University, Chongqing, P. R. China
| | - Yan-Li Chen
- School of Chemistry and Chemical Engineering, Southwest University, Chongqing, P. R. China
| | - Yi Yuan
- School of Chemistry and Chemical Engineering, Southwest University, Chongqing, P. R. China
| | - Jian Song
- School of Chemistry and Chemical Engineering, Southwest University, Chongqing, P. R. China
| | - Da-Cheng Yang
- School of Chemistry and Chemical Engineering, Southwest University, Chongqing, P. R. China
| | - Yang Xue
- School of Chemistry and Chemical Engineering, Southwest University, Chongqing, P. R. China
| | - Yan-Hong He
- School of Chemistry and Chemical Engineering, Southwest University, Chongqing, P. R. China
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13
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Leipold F, Hussain S, Ghislieri D, Turner NJ. Asymmetric Reduction of Cyclic Imines Catalyzed by a Whole-Cell Biocatalyst Containing an (S)-Imine Reductase. ChemCatChem 2013. [DOI: 10.1002/cctc.201300539] [Citation(s) in RCA: 112] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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14
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Hill RA, Sutherland A. Hot off the Press. Nat Prod Rep 2013. [DOI: 10.1039/c3np90022c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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