1
|
Thota VN, Fers-Lidou A, Nodwell M, McDonagh AW, Gilormini PA, Wang Y, Leung C, Vocadlo DJ, Britton R. A gram-scale synthesis of β-L-carbafucose for engineering antibody glycans. Commun Chem 2025; 8:139. [PMID: 40329042 PMCID: PMC12056183 DOI: 10.1038/s42004-025-01523-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2024] [Accepted: 04/11/2025] [Indexed: 05/08/2025] Open
Abstract
Afucosylated antibodies often exhibit superior properties compared to their fucosylated counterparts including, among others, enhanced antibody-dependent cell cytotoxicity (ADCC). While several recombinant and biochemical strategies have been identified for generating afucosylated antibodies, small molecule metabolic inhibitors provide a potentially more straightforward option. We recently reported that β-L-carbafucose is an inhibitor of antibody fucosylation and is not incorporated into the antibody glycans. To support the further study of β-L-carbafucose, a gram-scale synthesis was needed. Here, we report our investigation of three distinct synthetic routes, including a highly efficient chromatography-free synthesis. Further, we demonstrate multi-gram production of afucosylated Herceptin (Trastuzumab®) in 10 L bioreactors using β-L-carbafucose. We expect this new synthetic process will support the widespread adoption of β-L-carbafucose for producing afucosylated antibodies for discovery and development purposes.
Collapse
Affiliation(s)
| | - Anthony Fers-Lidou
- Department of Chemistry, Simon Fraser University, Burnaby, BC, V5A 1S6, Canada
| | - Matthew Nodwell
- Department of Chemistry, Simon Fraser University, Burnaby, BC, V5A 1S6, Canada
| | - Anthony W McDonagh
- Department of Chemistry, Simon Fraser University, Burnaby, BC, V5A 1S6, Canada
| | | | - Yang Wang
- Department of Chemistry, Simon Fraser University, Burnaby, BC, V5A 1S6, Canada
| | - Carolyn Leung
- Department of Chemistry, Simon Fraser University, Burnaby, BC, V5A 1S6, Canada
| | - David J Vocadlo
- Department of Chemistry, Simon Fraser University, Burnaby, BC, V5A 1S6, Canada.
| | - Robert Britton
- Department of Chemistry, Simon Fraser University, Burnaby, BC, V5A 1S6, Canada.
| |
Collapse
|
2
|
Seoane GA, Daher GM. Readily accessible azido-alkyne-functionalized monomers for the synthesis of cyclodextrin analogues using click chemistry. Org Biomol Chem 2022; 20:1690-1698. [DOI: 10.1039/d1ob02496e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A set of linear and cyclic oligomers were synthesized starting from a suitable azido-alkyne monomer through click oligomerization. The synthesis of these monomers starting from bromobenzene features an enzymatic dihydroxylation...
Collapse
|
3
|
Brindisi C, Vázquez S, Suescun L, Seoane G, Martín VS, Brovetto M. Chemoenzymatic Total Synthesis and Structural Revision of Ampelomins B, D, E, and epi-Ampelomin B. J Org Chem 2019; 84:15997-16002. [PMID: 31746213 DOI: 10.1021/acs.joc.9b02472] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Enantioselective synthesis of ampelomin B and epi-ampelomin B, D, and E was accomplished starting from toluene, through a chemoenzymatic sequence, in which stereoselective hydrogenation, Mitsunobu reaction, and regio- and stereoselective nucleophilic opening of an epoxide were used as the main transformations. Structural revision and absolute configuration of the natural compounds were carried out.
Collapse
Affiliation(s)
| | | | | | | | - Victor S Martín
- Instituto Universitario de Bio-Orgánica Antonio González, Departamento de Química Orgánica , Universidad de La Laguna , Avda. Astrofísico Francisco Sánchez 2 , 38206 La Laguna , Spain
| | | |
Collapse
|
4
|
Hayashi R, Shimizu A, Davies JA, Ishizaki Y, Willis C, Yoshida JI. Metal- and Oxidant-Free Alkenyl C−H/Aromatic C−H Cross-Coupling Using Electrochemically Generated Iodosulfonium Ions. Angew Chem Int Ed Engl 2018; 57:12891-12895. [DOI: 10.1002/anie.201807592] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2018] [Revised: 08/06/2018] [Indexed: 12/26/2022]
Affiliation(s)
- Ryutaro Hayashi
- Department of Synthetic Chemistry and Biological Chemistry; Graduate School of Engineering; Kyoto University, Nishikyo-ku; Kyoto 615-8510 Japan
| | - Akihiro Shimizu
- Department of Synthetic Chemistry and Biological Chemistry; Graduate School of Engineering; Kyoto University, Nishikyo-ku; Kyoto 615-8510 Japan
| | | | - Yu Ishizaki
- Department of Synthetic Chemistry and Biological Chemistry; Graduate School of Engineering; Kyoto University, Nishikyo-ku; Kyoto 615-8510 Japan
| | - Chris Willis
- School of Chemistry; University of Bristol; Bristol BS8 1TS UK
| | - Jun-ichi Yoshida
- National Institute of Technology; Suzuka College; Suzuka Mie 510-0294 Japan
| |
Collapse
|
5
|
Hayashi R, Shimizu A, Davies JA, Ishizaki Y, Willis C, Yoshida JI. Metal- and Oxidant-Free Alkenyl C−H/Aromatic C−H Cross-Coupling Using Electrochemically Generated Iodosulfonium Ions. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201807592] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Ryutaro Hayashi
- Department of Synthetic Chemistry and Biological Chemistry; Graduate School of Engineering; Kyoto University, Nishikyo-ku; Kyoto 615-8510 Japan
| | - Akihiro Shimizu
- Department of Synthetic Chemistry and Biological Chemistry; Graduate School of Engineering; Kyoto University, Nishikyo-ku; Kyoto 615-8510 Japan
| | | | - Yu Ishizaki
- Department of Synthetic Chemistry and Biological Chemistry; Graduate School of Engineering; Kyoto University, Nishikyo-ku; Kyoto 615-8510 Japan
| | - Chris Willis
- School of Chemistry; University of Bristol; Bristol BS8 1TS UK
| | - Jun-ichi Yoshida
- National Institute of Technology; Suzuka College; Suzuka Mie 510-0294 Japan
| |
Collapse
|
6
|
Koyanagi Y, Hamada T, Iwagawa T, Okamura H. Asymmetric synthesis of Ampelomin A and ent-Epiampelomin A. J Oleo Sci 2015; 64:449-54. [PMID: 25833454 DOI: 10.5650/jos.ess14212] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
We synthesized the naturally occurring carbasugar ampelomin A and its epimer from a common starting material. The enantiomerically pure starting material was obtained by base-catalyzed asymmetric Diels-Alder reaction of 3-hydroxy-2-pyrone and chiral acrylate. The total yield of ampelomin A was 14% in seven synthetic steps. The key step of the synthesis of ampelomin A was inversion of the stereochemistry at the C-6 position, which was achieved by stereoselective catalytic hydrogenation of the corresponding methylidene group. Further synthesis of the epimer was straightforward, because all stereogenic centers had already been introduced on the starting material; the total yield was 44% in four synthetic steps. Both the final products were obtained in pure form without contamination with undesired isomers. The reported (1)H NMR chemical shift of the C-7 methyl protons and the H-5axial coupling pattern of natural ampelomin A were inconsistent with those of our synthetic product. After careful comparison of the spectra and examination of the stable conformation obtained through MM2 calculations, we present revised NMR data for ampelomin A.
Collapse
Affiliation(s)
- Yuji Koyanagi
- Department of Chemistry and Bioscience, Graduate School of Kagoshima University
| | | | | | | |
Collapse
|