1
|
Flor-López AF, Matute RA, Jaque P. Identifying reactive normal modes and their effect on regioselectivity in Myers-Saito and Schmittel cyclization of enyne-allenes: a combined perspective between the reaction force constant and statistical tools. Phys Chem Chem Phys 2025; 27:797-812. [PMID: 39660408 DOI: 10.1039/d4cp03431g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2024]
Abstract
This paper presents a theoretical study on the distinguishable regiodivergent C2-C7 Myers-Saito and C2-C6 Schmittel routes of benzannelated enyne-allene cycloaromatizations, in which substitutions on the terminal alkyne by alkyl (-CH3, -CH2CH3, -CH(CH3)2 and -C(CH3)3) and aryl (-C6H5 and -C6H2(CH3)3) groups were included. Mechanistic differences were found between substituents attached to alkynes with and without α-H, whereas in the former the Schmittel cyclization proceeds together with 1,8-H migration, in the latter it does so as the sole primitive event. It was also observed that bulky substituents preferentially favor the C2-C6 Schmittel route, and the statistical prediction of regioselectivity is greatly affected when the ratio of accessible vibrational microstates of the transition states is included, especially in highly competing routes, i.e., ΔΔG‡ → 0. Aiming to gain a deeper understanding, an analysis based on reaction force F(ξ) and reaction force constant κ(ξ) was performed to gain insights into the competing routes. The reactive normal modes were unveiled by means of the correlation between κ(ξ) and the force constant of reaction modes κi(ξ), given by a statistical protocol based on the partial least square with vector importance in projection (PLS-VIP) method. These findings suggest how the vibrational energy can be reorganized in competing paths from a static approach.
Collapse
Affiliation(s)
- Andrés F Flor-López
- Departamento de Química Orgánica y Fisicoquímica, Facultad de Ciencias Químicas y Farmacéuticas, Universidad de Chile, Chile.
- Centro de Modelamiento Molecular, Biofísica y Bioinformática, CM2B2, Universidad de Chile, Sergio Livingstone 1007, Independencia, Santiago, Chile
| | - Ricardo A Matute
- Departamento de Química, Universidad Técnica Federico Santa María, Valparaíso 2340000, Chile.
- Noyes Laboratory of Chemical Physics, Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, USA
| | - Pablo Jaque
- Departamento de Química Orgánica y Fisicoquímica, Facultad de Ciencias Químicas y Farmacéuticas, Universidad de Chile, Chile.
- Centro de Modelamiento Molecular, Biofísica y Bioinformática, CM2B2, Universidad de Chile, Sergio Livingstone 1007, Independencia, Santiago, Chile
| |
Collapse
|
2
|
Tummanapalli S, Gulipalli KC, Bodige S, Pommidi AK, Boya R, Choppadandi S, Bakangari MR, Punna SK, Medaboina S, Mamindla DY, Kanuka A, Endoori S, Ganapathi VK, Kottam SD, Kalbhor D, Valluri M. Cu-Catalyzed Tandem C-N and C-C Bond Formation Leading to 4( 1H)-Quinolones: A Scaffold with Diverse Biological Properties from Totally New Raw Materials in a Single Step. J Org Chem 2024; 89:1609-1617. [PMID: 38238153 DOI: 10.1021/acs.joc.3c02215] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2024]
Abstract
A novel Cu-catalyzed tandem C-N and C-C bond-formation reaction has been developed to furnish 2-substituted-4-(1H)-quinolones. 4-(1H)-quinolones play an important role in medicinal chemistry. Many 2-aryl(alkyl)-4(1H)-quinolones are found to exhibit diverse biological properties. While traditional methods have inherent issues [like starting materials with incompatible functional groups (NH2 and keto groups)], many modern methods either require activated starting materials (like Ynones) or employ expensive metals (Pd, Rh, Au, etc.) involving carbonylation using CO or metal complexes. Our protocol presents an environmentally friendly one-step method for the construction of these useful 2-substituted-4-(1H)-quinolones from easily available aryl boronic acid (or pinacolate ester) and nitriles as new raw materials, using a cheap Cu-catalyst and O2 (air) as a green oxidant. We further extended its application to the synthesis of various natural products, including the first formal total synthesis of punarnavine. A plausible mechanism involving an aryl nitrilium ion (formed due to the intermolecular C-N bond-forming coupling between aryl boron species and the nitrile group) followed by tandem intramolecular C-C bond formation has been proposed.
Collapse
Affiliation(s)
- Satyanarayana Tummanapalli
- Curia India Pvt. Ltd (Formerly Albany Molecular Research Hyderabad Research Centre), Plot # 9, MN Park, Turkapally, Shameerpet, Genome Valley, RR District, Hyderabad 500078, India
| | - Kali Charan Gulipalli
- Curia India Pvt. Ltd (Formerly Albany Molecular Research Hyderabad Research Centre), Plot # 9, MN Park, Turkapally, Shameerpet, Genome Valley, RR District, Hyderabad 500078, India
| | - Srinu Bodige
- Curia India Pvt. Ltd (Formerly Albany Molecular Research Hyderabad Research Centre), Plot # 9, MN Park, Turkapally, Shameerpet, Genome Valley, RR District, Hyderabad 500078, India
| | - Anil Kumar Pommidi
- Curia India Pvt. Ltd (Formerly Albany Molecular Research Hyderabad Research Centre), Plot # 9, MN Park, Turkapally, Shameerpet, Genome Valley, RR District, Hyderabad 500078, India
| | - Ravi Boya
- Curia India Pvt. Ltd (Formerly Albany Molecular Research Hyderabad Research Centre), Plot # 9, MN Park, Turkapally, Shameerpet, Genome Valley, RR District, Hyderabad 500078, India
| | - Suresh Choppadandi
- Curia India Pvt. Ltd (Formerly Albany Molecular Research Hyderabad Research Centre), Plot # 9, MN Park, Turkapally, Shameerpet, Genome Valley, RR District, Hyderabad 500078, India
| | - Mahendar Reddy Bakangari
- Curia India Pvt. Ltd (Formerly Albany Molecular Research Hyderabad Research Centre), Plot # 9, MN Park, Turkapally, Shameerpet, Genome Valley, RR District, Hyderabad 500078, India
| | - Shiva Kumar Punna
- Curia India Pvt. Ltd (Formerly Albany Molecular Research Hyderabad Research Centre), Plot # 9, MN Park, Turkapally, Shameerpet, Genome Valley, RR District, Hyderabad 500078, India
| | - Srinivas Medaboina
- Curia India Pvt. Ltd (Formerly Albany Molecular Research Hyderabad Research Centre), Plot # 9, MN Park, Turkapally, Shameerpet, Genome Valley, RR District, Hyderabad 500078, India
| | - Devender Yadav Mamindla
- Curia India Pvt. Ltd (Formerly Albany Molecular Research Hyderabad Research Centre), Plot # 9, MN Park, Turkapally, Shameerpet, Genome Valley, RR District, Hyderabad 500078, India
| | - Ashok Kanuka
- Curia India Pvt. Ltd (Formerly Albany Molecular Research Hyderabad Research Centre), Plot # 9, MN Park, Turkapally, Shameerpet, Genome Valley, RR District, Hyderabad 500078, India
| | - Srinivas Endoori
- Curia India Pvt. Ltd (Formerly Albany Molecular Research Hyderabad Research Centre), Plot # 9, MN Park, Turkapally, Shameerpet, Genome Valley, RR District, Hyderabad 500078, India
| | - Vijay Kumar Ganapathi
- Curia India Pvt. Ltd (Formerly Albany Molecular Research Hyderabad Research Centre), Plot # 9, MN Park, Turkapally, Shameerpet, Genome Valley, RR District, Hyderabad 500078, India
| | - Sainath Dharmavaram Kottam
- Curia India Pvt. Ltd (Formerly Albany Molecular Research Hyderabad Research Centre), Plot # 9, MN Park, Turkapally, Shameerpet, Genome Valley, RR District, Hyderabad 500078, India
| | - Dinesh Kalbhor
- Curia India Pvt. Ltd (Formerly Albany Molecular Research Hyderabad Research Centre), Plot # 9, MN Park, Turkapally, Shameerpet, Genome Valley, RR District, Hyderabad 500078, India
| | - Muralikrishna Valluri
- Curia India Pvt. Ltd (Formerly Albany Molecular Research Hyderabad Research Centre), Plot # 9, MN Park, Turkapally, Shameerpet, Genome Valley, RR District, Hyderabad 500078, India
| |
Collapse
|
5
|
Döndaş HA, Retamosa MDG, Sansano JM. Recent Development in Palladium-Catalyzed Domino Reactions: Access to Materials and Biologically Important Carbo- and Heterocycles. Organometallics 2019. [DOI: 10.1021/acs.organomet.9b00110] [Citation(s) in RCA: 30] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Affiliation(s)
- H. Ali Döndaş
- Mersin University, Faculty of Pharmacy, Yenisehir Campus 33169, Yenisehir, Mersin, Turkey
| | - María de Gracia Retamosa
- Instituto de Investigaciones Químicas (CSIC-US) and Centro de Innovación en Química Avanzada (ORFEO-CINQA), Avda. Américo Vespucio, 49, 41092 Sevilla, Spain
| | - José M. Sansano
- Departamento de Química Orgánica, Instituto de Síntesis Orgánica (ISO) and Centro de Innovación en Química Avanzada (ORFEO-CINQA), University of Alicante, 03080 Alicante, Spain
| |
Collapse
|