Effects of fluorine-substitution on the molecular properties of dimethyl ethers: A theoretical investigation

Thermodynamic Properties: Enthalpy, Entropy, Heat Capacity, and Bond Energies of Fluorinated Carboxylic Acids

Fluorinated carboxylic acids and their radicals are becoming more prevalent in environmental waters and soils as they have been produced and used for numerous commercial applications. Understanding the thermochemical properties of fluorinated carboxylic acids will provide insights into the stability and reaction paths of these molecules in the environment, in body fluids, and in biological and biochemical processes. Structures and thermodynamic properties for over 50 species related to fluorinated carboxylic acids with two and three carbons are determined with density functional computational calculations B3LYP, M06-2X, and MN15 and higher ab initio levels CBS-QB3, CBS-APNO, and G4 of theory. The lowest energy structures, moments of inertia, vibrational frequencies, and internal rotor potentials of each target species are determined. Standard enthalpies of formation, Δ_fH₂₉₈^°, from CBS-APNO calculations show the smallest standard deviation among methods used in this work. Δ_fH₂₉₈^° values are determined via several series of isodesmic and/or isogyric reactions. Enthalpies of formation are determined for fluorinated acetic and propionic acids and their respective radicals corresponding to the loss of hydrogen and fluorine atoms. Heat capacities as a function of temperature, C_p(T), and entropy at 298 K, S₂₉₈^°, are determined. Thermochemical properties for the fluorinated carbon groups used in group additivity are also developed. Bond dissociation energies (BDEs) for the carbon-hydrogen, carbon-fluorine, and oxygen-hydrogen (C-H, C-F, and O-H BDEs) in the acids are reported. The C-H, C-F, and O-H bond energies of the fluorinated carboxylic acids are in the range of 89-104, 101-125, and 109-113 kcal mol^-1, respectively. General trends show that the O-H bond energies on the acid group increase with the increase in the fluorine substitution. The strong carbon fluorine bonds in a fluorinated acid support the higher stability of the perfluorinated acids in the environment.

The Conformational Map of Volatile Anesthetics: Enflurane Revisited

Previous ambiguities in the conformational and structural landscape of the volatile anesthetic enflurane have been solved combining microwave spectroscopy in a jet expansion and ab initio calculations. The broadband (2-18 GHz) rotational spectra identified three different rotamers, sharing a common trans ether skeleton but differing in the ±gauche/trans position of the terminal chlorine atom. For each chlorine conformation two different gauche orientations were predicted for the opposite difluoromethyl group, but only one is experimentally observable due to collisional relaxation in the jet. The experimental dataset comprised nine different isotopologues ((35) Cl, (37) Cl, (13) C) and a large number (>6500) of rotational transitions. The inertial data provided structural information using the substitution and effective procedures. The structural preferences were rationalized with additional ab initio, natural-bond-orbital and non-covalent-interaction analysis, which suggest that plausible anomeric effects at the difluoromethyl group could be overridden by other intramolecular effects. The difluoromethyl orientation thus reflects a minimization of inter-fluorine repulsions while maximizing F⋅⋅⋅H attractive interactions. A comparison with previous electron diffraction and spectroscopic data in the gas and condensed phases finally resulted in a comprehensive description of this ether, completing a rotational description of the most common multi-halogenated anesthetics.

A theoretical investigation on the conformation and the interaction of CHF₂OCF₂CHF₂ (desflurane II) with one water molecule

The conformation and the interaction of CHF₂OCF₂CHF₂ (desflurane II) with one water molecule is investigated theoretically using the ab initio MP2/aug-cc-pvdz and DFT-based M062X/6-311++G(d,p) methods. The calculations include the optimized geometries, the harmonic frequencies of relevant vibrational modes along with a natural bond orbital (NBO) analysis including the NBO charges, the hybridization of the C atom and the intra- and intermolecular hyperconjugation energies. In the two most stable conformers, the CH bond of the F2HCO- group occupies the gauche position. The hyperconjugation energies are about the same for both conformers and the conformational preference depends on the interaction between the non-bonded F and H atoms. The deprotonation enthalpies of the CH bonds are about the same for both conformers, the proton affinity of the less stable conformer being 3 kcal mol−1 higher. Both conformers of desflurane II interact with water forming cyclic complexes characterized by CH…O and OH…F hydrogen bonds. The binding energies are moderate, ranging from −2.4 to −3.2 kcal mol−1 at the MP2 level. The origin of the blue shifts of the ν(CH) vibrations is analyzed. In three of the complexes, the water molecule acts as an electron donor. Interestingly, in these cases a charge transfer is also directed to the non bonded OH group of the water molecule. This effect seems to be a property of polyfluorinated ethers.

Strong hyperconjugative interactions in isolated and water complexes of desflurane: a theoretical investigation

Ab initio MP2/aug-cc-pvDZ and density functional B3LYP calculations with the 6-311++G(d,p) basis set are performed to investigate the conformation of desflurane (CHF2OCHFCF3), its acidity/basicity and its interaction with one water molecule. The calculations include the optimized geometries, the harmonic frequencies of relevant vibrational modes, the binding energies with water, and a detailed natural bond orbital (NBO) analysis Iincluding the NBO charges, the hybridization of the C atoms and the intra- and intermolecular hyperconjugations. The relative energies of the two most stable conformers are discussed as a function of the total hyperconjugative energies resulting from the interaction of lone pairs of the O and F atoms to the different antibonding orbitals of desflurane. The proton affinity is the same for both conformers but the acidity of the CH bond is larger for the less stable conformer. The binding energies of the complexes of two desflurane conformers with one water molecule range from -2.75 to -3.23 kcal mol(-1). Depending on the structure of the complexes, the CH bonds involved in the interaction are contracted or elongated. The σ*(CH) occupation predominates over the hybridization effect in determining the CH bond length. There is an unexpected charge transfer to the external OH bond of the water molecule. This effect is in good agreement with theoretical data on the complexes between fluorinated dimethyl ethers and water and seems to depend on the number of F atoms implanted on the ether molecule.

Methyl formate and its mono and difluoro derivatives: conformational manifolds, basicity, and interaction with HF theoretical investigation

The conformational manifolds, scenarios of protonation, and hydrogen bond propensity of methyl formate and its mono and difluoro derivatives, which possess two oxygen atoms with different basicities, are studied at the B3LYP/6-311++G(3df,3pd) computational level. The optimized geometries of the title molecules, their energetics, and relevant harmonic vibrational frequencies, mainly of the ν(CH) mode of the H-C═O group, are of a primary focus. The Natural Bond Orbital analysis is invoked to obtain the second-order intra- or intermolecular hyperconjugation energies, occupations of antibonding orbitals, and hybridization of the carbon atoms. It is demonstrated that the Z conformers (and their rotamers) of the three title molecules are characterized by a higher stability compared to the E ones. The stabilities depend on the intramolecular hyperconjugative interaction and on the attraction or repulsion nonbonded interaction. The proton affinity of the carbonyl oxygen exceeds, by 15-20 kcal·mol(-1), that of the methoxy oxygen. Fluorine substitution causes a moderate lowering of the proton affinity of the oxygens. Protonation on the oxygen atoms yields a contraction of the C-H bond and large concomitant blue shift of the ν(CH) vibration. These changes are mainly determined by a lowering of the occupation of the corresponding σ*(CH) orbitals. The esters under consideration are probed on the interaction with the HF molecule. The complexes that are formed under this interaction on the oxygen of the H-C═O group are stronger than those formed on the oxygen belonging to the methoxy one. It is deduced that the hydrogen bond energies show a linear dependence on the proton affinities of the corresponding oxygen atoms. Hydrogen-bonded complexes of moderate strength are also formed, while HF interacts with the fluorine atoms of the fluorinated esters.

Theoretical and Experimental Studies of Enflurane. Infrared Spectra in Solution, in Low-Temperature Argon Matrix and Blue Shifts Resulting from Dimerization

Theoretical studies are performed on enflurane (CHFCl-CF(2)-O-CHF(2)) to investigate the conformational properties and vibrational spectra. Calculations are carried out at the B3LYP/6-31G(d) level along with a natural bond orbital (NBO) analysis. Experimental infrared spectra are investigated in carbon tetrachloride solution at room temperature and in argon matrix at 12 K. In agreement with previously reported data (Pfeiffer, A.; Mack, H.-G.; Oberhammer, H. J. Am. Chem. Soc. 1998, 120, 6384), it is shown that the four most stable conformers possess a trans configuration of the C-C-O-C skeleton and a gauche orientation of the CHF(2) group (with respect to the central C-O bond). These conformations are favored by electrostatic interaction between the H atom of the CHF(2) group and the F atoms of the central CF(2) group. Hyperconjugation effects from the O lone pairs to the antibonding orbitals of the neighboring C-H and C-F bonds also contribute to the stability of the four conformers. The vibrational frequencies, infrared intensities, and potential energy distributions are calculated at the same level of theory for the most stable conformers. On the basis of the theoretical results, these conformers are identified in an argon matrix. The influence of the concentration on the nu(CH) vibrations suggests the formations of higher aggregates in solution. Theoretical calculations are carried out on the enflurane dimer. The results show that the dimer is formed between two enflurane conformers having the largest stability. The dimer has an asymmetric cyclic structure, the two enflurane molecules being held together by two nonequivalent C-H...F hydrogen bonds, the C-H bond of the CHFCl group acting as a proton donor, and one of the F atoms of the CHF(2) groups acting as a proton acceptor. The theory predicts a contraction of 0.0014-0.0025 A of the two CH bonds involved in the interaction along with a blue shift of 30-38 cm(-1) of the corresponding nu(C-H) bands, in good agreement with the blue shifts of 35-39 cm(-1) observed in an argon matrix.