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For: Goodarzi M, Heyden YV, Funar-Timofei S. Towards better understanding of feature-selection or reduction techniques for Quantitative Structure–Activity Relationship models. Trends Analyt Chem 2013. [DOI: 10.1016/j.trac.2012.09.008] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]

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Number Cited by Other Article(s)
1
Feng Y, Zhu X, Wang Y. Application of spectroscopic technology with machine learning in Chinese herbs from seeds to medicinal materials: The case of genus Paris. J Pharm Anal 2025;15:101103. [PMID: 40034863 PMCID: PMC11874543 DOI: 10.1016/j.jpha.2024.101103] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2024] [Revised: 08/11/2024] [Accepted: 09/10/2024] [Indexed: 03/05/2025]  Open
2
Pucetti P, Valadares Filho SDC, Roque JV, da Silva JT, de Oliveira KR, Silva FAS, Cardoso WJ, e Silva FF, Swanson KC. Predicting ruminal degradability and chemical composition of corn silage using near-infrared spectroscopy and multivariate regression. PLoS One 2024;19:e0296447. [PMID: 38635552 PMCID: PMC11025743 DOI: 10.1371/journal.pone.0296447] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2023] [Accepted: 12/13/2023] [Indexed: 04/20/2024]  Open
3
Bui TBC, Iida D, Kitamura Y, Kokawa M. Utilization of multiple-dilution fluorescence fingerprint facilitates prediction of chemical attributes in spice extracts. Food Chem 2024;438:138028. [PMID: 38091861 DOI: 10.1016/j.foodchem.2023.138028] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2023] [Accepted: 11/14/2023] [Indexed: 12/28/2023]
4
Sidorov P, Tsuji N. A Primer on 2D Descriptors in Selectivity Modeling for Asymmetric Catalysis. Chemistry 2024;30:e202302837. [PMID: 38010242 DOI: 10.1002/chem.202302837] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2023] [Revised: 11/21/2023] [Accepted: 11/23/2023] [Indexed: 11/29/2023]
5
A partial least squares and artificial neural network study for a series of arylpiperazines as antidepressant agents. J Mol Model 2021;27:297. [PMID: 34558019 DOI: 10.1007/s00894-021-04906-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2021] [Accepted: 09/08/2021] [Indexed: 10/20/2022]
6
Shamsi E, Rahati A, Dehghanian E. A modified binary particle swarm optimization with a machine learning algorithm and molecular docking for QSAR modelling of cholinesterase inhibitors. SAR AND QSAR IN ENVIRONMENTAL RESEARCH 2021;32:745-767. [PMID: 34494463 DOI: 10.1080/1062936x.2021.1971761] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/05/2021] [Accepted: 08/19/2021] [Indexed: 06/13/2023]
7
Kuang ZK, Cheng XY, Yang ZX, Guo YX, Huang YQ, Su ZD. In silico prediction of GLP-1R agonists using machine learning approach. CHEMICAL PAPERS 2021. [DOI: 10.1007/s11696-021-01600-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
8
Alsenan S, Al-Turaiki I, Hafez A. A deep learning approach to predict blood-brain barrier permeability. PeerJ Comput Sci 2021;7:e515. [PMID: 34179448 PMCID: PMC8205267 DOI: 10.7717/peerj-cs.515] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2020] [Accepted: 04/08/2021] [Indexed: 06/13/2023]
9
Andries JPM, Goodarzi M, Heyden YV. Improvement of quantitative structure-retention relationship models for chromatographic retention prediction of peptides applying individual local partial least squares models. Talanta 2020;219:121266. [PMID: 32887157 DOI: 10.1016/j.talanta.2020.121266] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2020] [Revised: 06/02/2020] [Accepted: 06/03/2020] [Indexed: 10/24/2022]
10
Sheikhpour R, Sarram MA, Gharaghani S, Chahooki MAZ. A robust graph-based semi-supervised sparse feature selection method. Inf Sci (N Y) 2020. [DOI: 10.1016/j.ins.2020.03.094] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
11
Moscetti R, Massantini R, Fidaleo M. Application on-line NIR spectroscopy and other process analytical technology tools to the characterization of soy sauce desalting by electrodialysis. J FOOD ENG 2019. [DOI: 10.1016/j.jfoodeng.2019.06.022] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
12
An approach to identify new antihypertensive agents using Thermolysin as model: In silico study based on QSARINS and docking. ARAB J CHEM 2019. [DOI: 10.1016/j.arabjc.2016.10.003] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]  Open
13
Roque JV, Cardoso W, Peternelli LA, Teófilo RF. Comprehensive new approaches for variable selection using ordered predictors selection. Anal Chim Acta 2019;1075:57-70. [DOI: 10.1016/j.aca.2019.05.039] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2019] [Revised: 05/15/2019] [Accepted: 05/16/2019] [Indexed: 01/21/2023]
14
Ma Y, Cui P, Wang Y, Zhu Z, Wang Y, Gao J. A review of extractive distillation from an azeotropic phenomenon for dynamic control. Chin J Chem Eng 2019. [DOI: 10.1016/j.cjche.2018.08.015] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
15
Identification of novel monoamine oxidase selective inhibitors employing a hierarchical ligand-based virtual screening strategy. Future Med Chem 2019;11:801-816. [PMID: 31140884 DOI: 10.4155/fmc-2018-0596] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]  Open
16
Replacement Orthogonal Wavelengths Selection as a new method for multivariate calibration in spectroscopy. Microchem J 2019. [DOI: 10.1016/j.microc.2018.11.054] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
17
Zhang J, Cui X, Cai W, Shao X. A variable importance criterion for variable selection in near-infrared spectral analysis. Sci China Chem 2018. [DOI: 10.1007/s11426-018-9368-9] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
18
Sheikhpour R, Sarram MA, Sheikhpour E. Semi-supervised sparse feature selection via graph Laplacian based scatter matrix for regression problems. Inf Sci (N Y) 2018. [DOI: 10.1016/j.ins.2018.08.035] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
19
Chibli LA, Schmidt TJ, Nonato MC, Calil FA, Da Costa FB. Natural products as inhibitors of Leishmania major dihydroorotate dehydrogenase. Eur J Med Chem 2018;157:852-866. [PMID: 30145372 DOI: 10.1016/j.ejmech.2018.08.033] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2018] [Revised: 08/09/2018] [Accepted: 08/11/2018] [Indexed: 12/19/2022]
20
De Benedetti PG, Fanelli F. Computational modeling approaches to quantitative structure-binding kinetics relationships in drug discovery. Drug Discov Today 2018;23:1396-1406. [PMID: 29574212 DOI: 10.1016/j.drudis.2018.03.010] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2017] [Revised: 02/22/2018] [Accepted: 03/19/2018] [Indexed: 11/22/2022]
21
Sheikhpour R, Sarram MA, Rezaeian M, Sheikhpour E. QSAR modelling using combined simple competitive learning networks and RBF neural networks. SAR AND QSAR IN ENVIRONMENTAL RESEARCH 2018;29:257-276. [PMID: 29372662 DOI: 10.1080/1062936x.2018.1424030] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/14/2017] [Accepted: 01/02/2018] [Indexed: 06/07/2023]
22
Moscetti R, Raponi F, Ferri S, Colantoni A, Monarca D, Massantini R. Real-time monitoring of organic apple (var. Gala) during hot-air drying using near-infrared spectroscopy. J FOOD ENG 2018. [DOI: 10.1016/j.jfoodeng.2017.11.023] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
23
A combined Fisher and Laplacian score for feature selection in QSAR based drug design using compounds with known and unknown activities. J Comput Aided Mol Des 2017;32:375-384. [DOI: 10.1007/s10822-017-0094-6] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2017] [Accepted: 12/15/2017] [Indexed: 10/18/2022]
24
Real-Time Monitoring of Organic Carrot (var. Romance) During Hot-Air Drying Using Near-Infrared Spectroscopy. FOOD BIOPROCESS TECH 2017. [DOI: 10.1007/s11947-017-1975-3] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
25
Multi-objective feature selection for warfarin dose prediction. Comput Biol Chem 2017;69:126-133. [DOI: 10.1016/j.compbiolchem.2017.06.002] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2016] [Revised: 06/06/2017] [Accepted: 06/22/2017] [Indexed: 02/05/2023]
26
Shoombuatong W, Prathipati P, Owasirikul W, Worachartcheewan A, Simeon S, Anuwongcharoen N, Wikberg JES, Nantasenamat C. Towards the Revival of Interpretable QSAR Models. CHALLENGES AND ADVANCES IN COMPUTATIONAL CHEMISTRY AND PHYSICS 2017. [DOI: 10.1007/978-3-319-56850-8_1] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
27
Aniceto N, Freitas AA, Bender A, Ghafourian T. A novel applicability domain technique for mapping predictive reliability across the chemical space of a QSAR: reliability-density neighbourhood. J Cheminform 2016. [PMCID: PMC5395519 DOI: 10.1186/s13321-016-0182-y] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]  Open

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28
Qi M, Wang T, Yi Y, Gao N, Kong J, Wang J. Joint L2,1 Norm and Fisher Discrimination Constrained Feature Selection for Rational Synthesis of Microporous Aluminophosphates. Mol Inform 2016;36. [PMID: 27863104 DOI: 10.1002/minf.201600076] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2016] [Accepted: 10/21/2016] [Indexed: 11/11/2022]
29
Support vector regression-guided unravelling: antioxidant capacity and quantitative structure-activity relationship predict reduction and promotion effects of flavonoids on acrylamide formation. Sci Rep 2016;6:32368. [PMID: 27586851 PMCID: PMC5009353 DOI: 10.1038/srep32368] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2016] [Accepted: 08/08/2016] [Indexed: 11/29/2022]  Open
30
Goodarzi M, Saeys W. Selection of the most informative near infrared spectroscopy wavebands for continuous glucose monitoring in human serum. Talanta 2016;146:155-65. [DOI: 10.1016/j.talanta.2015.08.033] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2015] [Revised: 08/13/2015] [Accepted: 08/15/2015] [Indexed: 10/23/2022]
31
Chen B, Zhang T, Bond T, Gan Y. Development of quantitative structure activity relationship (QSAR) model for disinfection byproduct (DBP) research: A review of methods and resources. JOURNAL OF HAZARDOUS MATERIALS 2015;299:260-79. [PMID: 26142156 DOI: 10.1016/j.jhazmat.2015.06.054] [Citation(s) in RCA: 79] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/31/2015] [Revised: 06/17/2015] [Accepted: 06/21/2015] [Indexed: 05/19/2023]
32
Talebi M, Schuster G, Shellie RA, Szucs R, Haddad PR. Performance comparison of partial least squares-related variable selection methods for quantitative structure retention relationships modelling of retention times in reversed-phase liquid chromatography. J Chromatogr A 2015;1424:69-76. [DOI: 10.1016/j.chroma.2015.10.099] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2015] [Revised: 10/27/2015] [Accepted: 10/29/2015] [Indexed: 11/27/2022]
33
Multivariate calibration of NIR spectroscopic sensors for continuous glucose monitoring. Trends Analyt Chem 2015. [DOI: 10.1016/j.trac.2014.12.005] [Citation(s) in RCA: 82] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
34
Moscetti R, Saeys W, Keresztes JC, Goodarzi M, Cecchini M, Danilo M, Massantini R. Hazelnut Quality Sorting Using High Dynamic Range Short-Wave Infrared Hyperspectral Imaging. FOOD BIOPROCESS TECH 2015. [DOI: 10.1007/s11947-015-1503-2] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
35
Yaroshenko IS, Kirsanov DO, Wang P, Ha D, Wan H, He J, Vlasov YG, Legin AV. Determination of the toxicity of herb preparations of the traditional Chinese medicine with a multisensor system. RUSS J APPL CHEM+ 2015. [DOI: 10.1134/s1070427215010115] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
36
Melo EBD. A structure–activity relationship study of the toxicity of ionic liquids using an adapted Ferreira–Kiralj hydrophobicity parameter. Phys Chem Chem Phys 2015;17:4516-23. [DOI: 10.1039/c4cp04142a] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
37
Jouyban A, Shayanfar A, Ghafourian T, Acree WE. Solubility prediction of pharmaceuticals in dioxane+water mixtures at various temperatures: Effects of different descriptors and feature selection methods. J Mol Liq 2014. [DOI: 10.1016/j.molliq.2014.02.012] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
38
Quantitative structure activity relationship and docking studies of imidazole-based derivatives as P-glycoprotein inhibitors. Med Chem Res 2014. [DOI: 10.1007/s00044-014-1029-6] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
39
Sharma S, Goodarzi M, Ramon H, Saeys W. Performance evaluation of preprocessing techniques utilizing expert information in multivariate calibration. Talanta 2014;121:105-12. [DOI: 10.1016/j.talanta.2013.12.053] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2013] [Revised: 12/18/2013] [Accepted: 12/24/2013] [Indexed: 11/15/2022]
40
Yun YH, Wang WT, Tan ML, Liang YZ, Li HD, Cao DS, Lu HM, Xu QS. A strategy that iteratively retains informative variables for selecting optimal variable subset in multivariate calibration. Anal Chim Acta 2014;807:36-43. [DOI: 10.1016/j.aca.2013.11.032] [Citation(s) in RCA: 133] [Impact Index Per Article: 12.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2013] [Revised: 11/13/2013] [Accepted: 11/14/2013] [Indexed: 11/12/2022]
41
Sharma S, Goodarzi M, Wynants L, Ramon H, Saeys W. Efficient use of pure component and interferent spectra in multivariate calibration. Anal Chim Acta 2013;778:15-23. [DOI: 10.1016/j.aca.2013.03.045] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2012] [Revised: 02/12/2013] [Accepted: 03/19/2013] [Indexed: 11/24/2022]
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