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Mvundura M, Ngwira LG, Shrestha KB, Tuladhar R, Gauld J, Kerr C, Barnes K, Anscombe C, Sharma B, Feasey N. Cost-effectiveness of wastewater-based environmental surveillance for SARS-CoV-2 in Blantyre, Malawi and Kathmandu, Nepal: A model-based study. PLOS GLOBAL PUBLIC HEALTH 2025; 5:e0004439. [PMID: 40273116 PMCID: PMC12021199 DOI: 10.1371/journal.pgph.0004439] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/28/2024] [Accepted: 04/01/2025] [Indexed: 04/26/2025]
Abstract
Wastewater-based environmental surveillance (ES) has been demonstrated to provide an early warning signal to predict variant-driven waves of pathogens such as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). Our study evaluated the potential cost-effectiveness of ES for SARS-CoV-2 compared with clinical testing alone. We used the Covasim agent-based model of COVID-19 to simulate disease transmission for hypothetical populations in Blantyre, Malawi, and Kathmandu, Nepal. We simulated the introduction of a new immune-escaping variant over 6 months and estimated health outcomes (cases, deaths, and disability-adjusted life years [DALYs]) and economic impact when using ES to trigger a moderate proactive behavioral intervention (e.g., increased use of masks, social distancing) by policymakers versus no ES and hence a delayed reactive intervention. Costs considered included for ES, clinical testing, treatment, and productivity loss for the entire population due to implementation of the behavioral intervention. We calculated the incremental cost-effectiveness ratios and compared these with local willingness-to-pay thresholds: $61 for Malawi and $249 for Nepal. We performed sensitivity analyses to evaluate the impact of key assumptions on the results. Costs are reported in 2022 US dollars. We estimate that if ES were implemented, approximately 600 DALYs would be averted in Blantyre and approximately 300 DALYs averted in Kathmandu, over the six-month period. Considering health system costs, ES was cost-effective in Blantyre and cost-saving in Kathmandu. Cost-effectiveness of ES was highest in settings with low clinical surveillance, high disease severity, and high intervention effectiveness. However, from the societal perspective, ES may not be cost-effective depending on the magnitude of population-wide productivity losses associated with the proactive behavioral intervention and the cost-effectiveness threshold. SARS-CoV-2 ES has the potential to be a cost-saving or cost-effective tool from the health system perspective when linked to an effective public health response. From the societal perspective, however, the length of the behavioral intervention and its consequences for productivity losses of the entire population may make ES not cost-effective. Implementing ES for multiple pathogens may improve its cost-effectiveness.
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Affiliation(s)
- Mercy Mvundura
- Medical Devices and Health Technologies, PATH, Seattle, Washington, United States of America
| | - Lucky G. Ngwira
- Malawi-Liverpool Wellcome Programme, Kamuzu University of Health Sciences, Blantyre, Malawi
- Health Economics and Policy Unit, Kamuzu University of Health Sciences, Blantyre, Malawi
| | | | - Reshma Tuladhar
- Central Department of Microbiology, Tribhuvan University, Kathmandu, Nepal
| | - Jillian Gauld
- Institute for Disease Modeling, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America
| | - Cliff Kerr
- Institute for Disease Modeling, Bill & Melinda Gates Foundation, Seattle, Washington, United States of America
| | - Kayla Barnes
- Malawi-Liverpool Wellcome Programme, Kamuzu University of Health Sciences, Blantyre, Malawi
- Broad Institute, Boston, Massachusetts, United States of America
- Liverpool School of Tropical Medicine, Liverpool, United Kingdom
- Harvard School of Public Health, Boston, Massachusetts, United States of America
| | - Catherine Anscombe
- Malawi-Liverpool Wellcome Programme, Kamuzu University of Health Sciences, Blantyre, Malawi
| | - Bhawana Sharma
- Environment and Public Health Organisation, Kathmandu, Nepal
| | - Nicholas Feasey
- Malawi-Liverpool Wellcome Programme, Kamuzu University of Health Sciences, Blantyre, Malawi
- Liverpool School of Tropical Medicine, Liverpool, United Kingdom
- School of Medicine, University of St. Andrews, St. Andrews, United Kingdom
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Hamilton KA, Wade MJ, Barnes KG, Street RA, Paterson S. Wastewater-based epidemiology as a public health resource in low- and middle-income settings. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2024; 351:124045. [PMID: 38677460 DOI: 10.1016/j.envpol.2024.124045] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/09/2023] [Revised: 02/14/2024] [Accepted: 04/23/2024] [Indexed: 04/29/2024]
Abstract
In the face of emerging and re-emerging diseases, novel and innovative approaches to population scale surveillance are necessary for the early detection and quantification of pathogens. The last decade has seen the rapid development of wastewater and environmental surveillance (WES) to address public health challenges, which has led to establishment of wastewater-based epidemiology (WBE) approaches being deployed to monitor a range of health hazards. WBE exploits the fact that excretions and secretions from urine, and from the gut are discharged in wastewater, particularly sewage, such that sampling sewage systems provides an early warning system for disease outbreaks by providing an early indication of pathogen circulation. While WBE has been mainly used in locations with networked wastewater systems, here we consider its value for less connected populations typical of lower-income settings, and in assess the opportunity afforded by pit latrines to sample communities and localities. We propose that where populations struggle to access health and diagnostic facilities, and despite several additional challenges, sampling unconnected wastewater systems remains an important means to monitor the health of large populations in a relatively cost-effective manner.
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Affiliation(s)
- K A Hamilton
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, L69 7ZB, United Kingdom; International Livestock Research Institute, Nairobi, Kenya, PO Box 30709-00100.
| | - M J Wade
- Data, Analytics & Surveillance Group, UK Health Security Agency, London United Kingdom
| | - K G Barnes
- Malawi-Liverpool-Wellcome Programme (MLW), Blantyre, Malawi; Harvard School of Public Health, Boston, MA, USA; Broad Institute of MIT and Harvard, Cambridge, MA, USA
| | - R A Street
- South African Medical Research Council, Cape Town, Western Cape, South Africa
| | - S Paterson
- Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, L69 7ZB, United Kingdom
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Chen J, Long JE, Vannice K, Shewchuk T, Kumar S, Duncan Steele A, Zaidi AKM. Taking on Typhoid: Eliminating Typhoid Fever as a Global Health Problem. Open Forum Infect Dis 2023; 10:S74-S81. [PMID: 37274535 PMCID: PMC10236514 DOI: 10.1093/ofid/ofad055] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/06/2023] Open
Abstract
Typhoid fever is a significant global health problem that impacts people living in areas without access to clean water and sanitation. However, collaborative international partnerships and new research have improved both knowledge of the burden in countries with endemic disease and the tools for improved surveillance, including environmental surveillance. Two typhoid conjugate vaccines (TCVs) have achieved World Health Organization prequalification, with several more in the development pipeline. Despite hurdles posed by the coronavirus disease 2019 pandemic, multiple TCV efficacy trials have been conducted in high-burden countries, and data indicate that TCVs provide a high degree of protection from typhoid fever, are safe to use in young children, provide lasting protection, and have the potential to combat typhoid antimicrobial resistance. Now is the time to double down on typhoid control and elimination by sustaining progress made through water, sanitation, and hygiene improvements and accelerating TCV introduction in high-burden locations.
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Affiliation(s)
- Jessie Chen
- Enteric and Diarrheal Diseases, Global Health, Bill & Melinda Gates Foundation, Seattle, Washington, USA
| | - Jessica E Long
- Enteric and Diarrheal Diseases, Global Health, Bill & Melinda Gates Foundation, Seattle, Washington, USA
| | - Kirsten Vannice
- Enteric and Diarrheal Diseases, Global Health, Bill & Melinda Gates Foundation, Seattle, Washington, USA
| | - Tanya Shewchuk
- Enteric and Diarrheal Diseases, Global Health, Bill & Melinda Gates Foundation, Seattle, Washington, USA
| | - Supriya Kumar
- Enteric and Diarrheal Diseases, Global Health, Bill & Melinda Gates Foundation, Seattle, Washington, USA
| | - A Duncan Steele
- Enteric and Diarrheal Diseases, Global Health, Bill & Melinda Gates Foundation, Seattle, Washington, USA
| | - Anita K M Zaidi
- Enteric and Diarrheal Diseases, Global Health, Bill & Melinda Gates Foundation, Seattle, Washington, USA
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Uzzell CB, Troman CM, Rigby J, Raghava Mohan V, John J, Abraham D, Srinivasan R, Nair S, Meschke JS, Elviss N, Kang G, Feasey NA, Grassly NC. Environmental surveillance for Salmonella Typhi as a tool to estimate the incidence of typhoid fever in low-income populations. Wellcome Open Res 2023. [DOI: 10.12688/wellcomeopenres.17687.1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023] Open
Abstract
Background: The World Health Organisation recommends prioritised use of recently prequalified typhoid conjugate vaccines in countries with the highest incidence of typhoid fever. However, representative typhoid surveillance data are lacking in many low-income countries because of the costs and challenges of diagnostic clinical microbiology. Environmental surveillance (ES) of Salmonella Typhi in sewage and wastewater using molecular methods may offer a low-cost alternative, but its performance in comparison with clinical surveillance has not been assessed. Methods: We developed a harmonised protocol for typhoid ES and its implementation in communities in India and Malawi where it will be compared with findings from hospital-based surveillance for typhoid fever. The protocol includes methods for ES site selection based on geospatial analysis, grab and trap sample collection at sewage and wastewater sites, and laboratory methods for sample processing, concentration and quantitative polymerase chain reaction (PCR) to detect Salmonella Typhi. The optimal locations for ES sites based on digital elevation models and mapping of sewage and river networks are described for each community and their suitability confirmed through field investigation. We will compare the prevalence and abundance of Salmonella Typhi in ES samples collected each month over a 12-month period to the incidence of blood culture confirmed typhoid cases recorded at referral hospitals serving the study areas. Conclusions: If environmental detection of Salmonella Typhi correlates with the incidence of typhoid fever estimated through clinical surveillance, typhoid ES may be a powerful and low-cost tool to estimate the local burden of typhoid fever and support the introduction of typhoid conjugate vaccines. Typhoid ES could also allow the impact of vaccination to be assessed and rapidly identify circulation of drug resistant strains.
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Mathematical Models for Typhoid Disease Transmission: A Systematic Literature Review. MATHEMATICS 2022. [DOI: 10.3390/math10142506] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
Explaining all published articles on the typhoid disease transmission model was carried out. It has been conducted to understand how Salmonella is transmitted among humans and vectors with variation interventions to control the spread of the typhoid disease. Specific objectives were to (1) identify the model developed, (2) describe the studies, and (3) identify the interventions of the model. It systemically searched and reviewed Dimension, Scopus, and ScienceDirect databases from 2013 through to 2022 for articles that studied the spread of typhoid fever through a compartmental mathematical model. This study obtained 111 unique articles from three databases, resulting in 23 articles corresponding to the created terms. All the articles were elaborated on to identify their identities for more explanation. Various interventions were considered in the model of each article, are identified, and then summarized to find out the opportunities for model development in future works. The whole article’s content was identified and outlined regarding how mathematics plays a role in model analysis and study of typhoid disease spread with various interventions. The study of mathematical modeling for typhoid disease transmission can be developed on analysis and creating the model with direct and indirect interventions to the human population for further work.
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Liu P, Ibaraki M, Kapoor R, Amin N, Das A, Miah R, Mukhopadhyay AK, Rahman M, Dutta S, Moe CL. Development of Moore Swab and Ultrafiltration Concentration and Detection Methods for Salmonella Typhi and Salmonella Paratyphi A in Wastewater and Application in Kolkata, India and Dhaka, Bangladesh. Front Microbiol 2021; 12:684094. [PMID: 34335510 PMCID: PMC8320291 DOI: 10.3389/fmicb.2021.684094] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2021] [Accepted: 06/23/2021] [Indexed: 11/16/2022] Open
Abstract
Enteric fever is a severe systemic infection caused by Salmonella enterica serovar Typhi (ST) and Salmonella enterica serovar Paratyphi A (SPA). Detection of ST and SPA in wastewater can be used as a surveillance strategy to determine burden of infection and identify priority areas for water, sanitation, and hygiene interventions and vaccination campaigns. However, sensitive and specific detection of ST and SPA in environmental samples has been challenging. In this study, we developed and validated two methods for concentrating and detecting ST/SPA from wastewater: the Moore swab trap method for qualitative results, and ultrafiltration (UF) for sensitive quantitative detection, coupled with qPCR. We then applied these methods for ST and SPA wastewater surveillance in Kolkata, India and Dhaka, Bangladesh, two enteric fever endemic areas. The qPCR assays had a limit of detection of 17 equivalent genome copies (EGC) for ST and 25 EGC for SPA with good reproducibility. In seeded trials, the Moore swab method had a limit of detection of approximately 0.05–0.005 cfu/mL for both ST and SPA. In 53 Moore swab samples collected from three Kolkata pumping stations between September 2019 and March 2020, ST was detected in 69.8% and SPA was detected in 20.8%. Analysis of sewage samples seeded with known amount of ST and SPA and concentrated via the UF method, followed by polyethylene glycol precipitation and qPCR detection demonstrated that UF can effectively recover approximately 8, 5, and 3 log10 cfu of seeded ST and SPA in 5, 10, and 20 L of wastewater. Using the UF method in Dhaka, ST was detected in 26.7% (8/30) of 20 L drain samples with a range of 0.11–2.10 log10 EGC per 100 mL and 100% (4/4) of 20 L canal samples with a range of 1.02–2.02 log10 EGC per 100 mL. These results indicate that the Moore swab and UF methods provide sensitive presence/absence and quantitative detection of ST/SPA in wastewater samples.
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Affiliation(s)
- Pengbo Liu
- Center for Global Safe Water, Sanitation, and Hygiene, Rollins School of Public Health, Emory University, Atlanta, GA, United States
| | - Makoto Ibaraki
- Center for Global Safe Water, Sanitation, and Hygiene, Rollins School of Public Health, Emory University, Atlanta, GA, United States
| | - Renuka Kapoor
- Center for Global Safe Water, Sanitation, and Hygiene, Rollins School of Public Health, Emory University, Atlanta, GA, United States
| | - Nuhu Amin
- Environmental Interventions Unit, Infectious Disease Division, International Centre for Diarrhoeal Disease, Bangladesh (ICDDR,B), Dhaka, Bangladesh
| | - Abhishek Das
- Indian Council of Medical Research (ICMR), National Institute of Cholera and Enteric Diseases (NICID), Kolkata, India
| | - Rana Miah
- Environmental Interventions Unit, Infectious Disease Division, International Centre for Diarrhoeal Disease, Bangladesh (ICDDR,B), Dhaka, Bangladesh
| | - Asish K Mukhopadhyay
- Indian Council of Medical Research (ICMR), National Institute of Cholera and Enteric Diseases (NICID), Kolkata, India
| | - Mahbubur Rahman
- Environmental Interventions Unit, Infectious Disease Division, International Centre for Diarrhoeal Disease, Bangladesh (ICDDR,B), Dhaka, Bangladesh
| | - Shanta Dutta
- Indian Council of Medical Research (ICMR), National Institute of Cholera and Enteric Diseases (NICID), Kolkata, India
| | - Christine L Moe
- Center for Global Safe Water, Sanitation, and Hygiene, Rollins School of Public Health, Emory University, Atlanta, GA, United States
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