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Lim SJ, Muhd Noor ND, Sabri S, Mohamad Ali MS, Salleh AB, Oslan SN. Features of the rare pathogen Meyerozyma guilliermondii strain SO and comprehensive in silico analyses of its adherence-contributing virulence factor agglutinin-like sequences. J Biomol Struct Dyn 2025; 43:3728-3748. [PMID: 38189364 DOI: 10.1080/07391102.2023.2300757] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2023] [Accepted: 12/17/2023] [Indexed: 01/09/2024]
Abstract
Meyerozyma guilliermondii is a rare yeast pathogen contributing to the deadly invasive candidiasis. M. guilliermondii strain SO, as a promising protein expression host, showed 99% proteome similarity with the clinically isolated ATCC 6260 (type strain) in a recent comparative genomic analysis. However, their in vitro virulence features and in vivo pathogenicity were uncharacterized. This study aimed to characterize the in vitro and in vivo pathogenicity of M. guilliermondii strain SO and analyze its Als proteins (MgAls) via comprehensive bioinformatics approaches. M. guilliermondii strain SO showed lower and higher sensitivity towards β-mercaptoethanol and lithium, respectively than the avirulent S. cerevisiae but exhibited the same tolerance towards cell wall-perturbing Congo Red with C. albicans. With 7.5× higher biofilm mass, M. guilliermondii strain SO also demonstrated 75% higher mortality rate in the zebrafish embryos with a thicker biofilm layer on the chorion compared to the avirulent S. cerevisiae. Being one of the most important Candida adhesins, sequence and structural analyses of four statistically identified MgAls showed that MgAls1056 was predicted to exhibit the most conserved amyloid-forming regions, tandem repeat domain and peptide binding cavity (PBC) compared to C. albicans Als3. Favoured from the predicted largest ligand binding site and druggable pockets, it showed the highest affinity towards hepta-threonine. Non-PBC druggable pockets in the most potent virulence contributing MgAls1056 provide new insights into developing antifungal drugs targeting non-albicans Candida spp. Virtual screening of available synthetic or natural bioactive compounds and MgAls1056 deletion from the fungal genome should be further performed and validated experimentally.
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Affiliation(s)
- Si Jie Lim
- Enzyme Technology and X-ray Crystallography Laboratory, VacBio 5, Institute of Bioscience Universiti Putra Malaysia, UPM Serdang, Selangor, Malaysia
- Enzyme and Microbial Technology (EMTech) Research Centre, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, UPM Serdang, Selangor, Malaysia
| | - Noor Dina Muhd Noor
- Enzyme and Microbial Technology (EMTech) Research Centre, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, UPM Serdang, Selangor, Malaysia
- Department of Biochemistry, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, UPM Serdang, Selangor, Malaysia
| | - Suriana Sabri
- Enzyme and Microbial Technology (EMTech) Research Centre, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, UPM Serdang, Selangor, Malaysia
- Department of Microbiology, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, UPM Serdang, Selangor, Malaysia
| | - Mohd Shukuri Mohamad Ali
- Enzyme Technology and X-ray Crystallography Laboratory, VacBio 5, Institute of Bioscience Universiti Putra Malaysia, UPM Serdang, Selangor, Malaysia
- Enzyme and Microbial Technology (EMTech) Research Centre, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, UPM Serdang, Selangor, Malaysia
- Department of Biochemistry, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, UPM Serdang, Selangor, Malaysia
| | - Abu Bakar Salleh
- Enzyme and Microbial Technology (EMTech) Research Centre, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, UPM Serdang, Selangor, Malaysia
| | - Siti Nurbaya Oslan
- Enzyme Technology and X-ray Crystallography Laboratory, VacBio 5, Institute of Bioscience Universiti Putra Malaysia, UPM Serdang, Selangor, Malaysia
- Enzyme and Microbial Technology (EMTech) Research Centre, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, UPM Serdang, Selangor, Malaysia
- Department of Biochemistry, Faculty of Biotechnology and Biomolecular Sciences, Universiti Putra Malaysia, UPM Serdang, Selangor, Malaysia
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Teston E, Sautour M, Boulnois L, Augey N, Dighab A, Guillet C, Garcia-Hermoso D, Lanternier F, Bougnoux ME, Dalle F, Basmaciyan L, Blot M, Charles PE, Quenot JP, Podac B, Neuwirth C, Boccara C, Boccara M, Thouvenin O, Maldiney T. Label-Free Optical Transmission Tomography for Direct Mycological Examination and Monitoring of Intracellular Dynamics. J Fungi (Basel) 2024; 10:741. [PMID: 39590661 PMCID: PMC11595662 DOI: 10.3390/jof10110741] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2024] [Revised: 10/16/2024] [Accepted: 10/23/2024] [Indexed: 11/28/2024] Open
Abstract
Live-cell imaging generally requires pretreatment with fluorophores to either monitor cellular functions or the dynamics of intracellular processes and structures. We have recently introduced full-field optical coherence tomography for the label-free live-cell imaging of fungi with potential clinical applications for the diagnosis of invasive fungal mold infections. While both the spatial resolution and technical set up of this technology are more likely designed for the histopathological analysis of tissue biopsies, there is to our knowledge no previous work reporting the use of a light interference-based optical technique for direct mycological examination and monitoring of intracellular processes. We describe the first application of dynamic full-field optical transmission tomography (D-FF-OTT) to achieve both high-resolution and live-cell imaging of fungi. First, D-FF-OTT allowed for the precise examination and identification of several elementary structures within a selection of fungal species commonly known to be responsible for invasive fungal infections such as Candida albicans, Aspergillus fumigatus, or Rhizopus arrhizus. Furthermore, D-FF-OTT revealed the intracellular trafficking of organelles and vesicles related to metabolic processes of living fungi, thus opening new perspectives in fast fungal infection diagnostics.
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Affiliation(s)
- Eliott Teston
- Lipness Team, Translational Research Center in Molecular Medicine– INSERM Joint Research Unit (CTM-UMR1231), University of Burgundy, 21000 Dijon, France
| | - Marc Sautour
- Department of Parasitology/Mycology, Dijon Bourgogne University Hospital, 21000 Dijon, France
- Unité mixte de recherche Procédés Alimentaires et Microbiologiques (UMR PAM) A 02.102, Bourgogne Franche-Comté University, AgroSup Dijon, 21079 Dijon, France
| | - Léa Boulnois
- Medical Biology Laboratory, William Morey General Hospital, 71100 Chalon-sur-Saône, France
| | - Nicolas Augey
- LISPEN, Arts et Metiers Institute of Technology, 71100 Chalon-sur-Saône, France
| | - Abdellah Dighab
- LISPEN, Arts et Metiers Institute of Technology, 71100 Chalon-sur-Saône, France
| | - Christophe Guillet
- LISPEN, Arts et Metiers Institute of Technology, 71100 Chalon-sur-Saône, France
| | - Dea Garcia-Hermoso
- Translational Mycology Research Group, Mycology Department, National Reference Center for Invasive Mycoses and Antifungals, Institut Pasteur, Paris Cité University, 75015 Paris, France
| | - Fanny Lanternier
- Translational Mycology Research Group, Mycology Department, National Reference Center for Invasive Mycoses and Antifungals, Institut Pasteur, Paris Cité University, 75015 Paris, France
- Necker-Enfants Malades Hospital, Assistance Publique-Hôpitaux de Paris, 75015 Paris, France
| | | | - Frédéric Dalle
- Department of Parasitology/Mycology, Dijon Bourgogne University Hospital, 21000 Dijon, France
- Unité mixte de recherche Procédés Alimentaires et Microbiologiques (UMR PAM) A 02.102, Bourgogne Franche-Comté University, AgroSup Dijon, 21079 Dijon, France
| | - Louise Basmaciyan
- Department of Parasitology/Mycology, Dijon Bourgogne University Hospital, 21000 Dijon, France
- Unité mixte de recherche Procédés Alimentaires et Microbiologiques (UMR PAM) A 02.102, Bourgogne Franche-Comté University, AgroSup Dijon, 21079 Dijon, France
| | - Mathieu Blot
- Lipness Team, Translational Research Center in Molecular Medicine– INSERM Joint Research Unit (CTM-UMR1231), University of Burgundy, 21000 Dijon, France
- Infectious Diseases Department, Dijon Bourgogne University Hospital, 21000 Dijon, France
| | - Pierre-Emmanuel Charles
- Lipness Team, Translational Research Center in Molecular Medicine– INSERM Joint Research Unit (CTM-UMR1231), University of Burgundy, 21000 Dijon, France
- Department of Intensive Care Medicine, Dijon Bourgogne University Hospital, 21000 Dijon, France
| | - Jean-Pierre Quenot
- Lipness Team, Translational Research Center in Molecular Medicine– INSERM Joint Research Unit (CTM-UMR1231), University of Burgundy, 21000 Dijon, France
- Department of Intensive Care Medicine, Dijon Bourgogne University Hospital, 21000 Dijon, France
| | - Bianca Podac
- Medical Biology Laboratory, William Morey General Hospital, 71100 Chalon-sur-Saône, France
| | - Catherine Neuwirth
- Department of Bacteriology, University Hospital of Dijon, 21000 Dijon, France
- UMR/CNRS 6248 Chrono-Environnement, Bougogne Franche-Comté University, 25000 Besançon, France
| | - Claude Boccara
- Institut Langevin, Ecole Supérieure de Physique et Chimie Industrielle de la ville de Paris, Université PSL, CNRS, 75005 Paris, France
| | - Martine Boccara
- Institut de Systématique, Evolution, Biodiversité– (ISYEB-UMR7205), Ecole Normale Supérieure, PSL Research University, 75005 Paris, France
| | - Olivier Thouvenin
- Institut Langevin, Ecole Supérieure de Physique et Chimie Industrielle de la ville de Paris, Université PSL, CNRS, 75005 Paris, France
| | - Thomas Maldiney
- Lipness Team, Translational Research Center in Molecular Medicine– INSERM Joint Research Unit (CTM-UMR1231), University of Burgundy, 21000 Dijon, France
- Department of Intensive Care Medicine, William Morey General Hospital, 71100 Chalon-sur-Saône, France
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The Pga59 cell wall protein is an amyloid forming protein involved in adhesion and biofilm establishment in the pathogenic yeast Candida albicans. NPJ Biofilms Microbiomes 2023; 9:6. [PMID: 36697414 PMCID: PMC9877000 DOI: 10.1038/s41522-023-00371-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2022] [Accepted: 01/09/2023] [Indexed: 01/26/2023] Open
Abstract
The human commensal fungus Candida albicans can attach to epithelia or indwelling medical devices and form biofilms, that are highly tolerant to antifungal drugs and can evade the immune response. The cell surface protein Pga59 has been shown to influence adhesion and biofilm formation. Here, we present evidence that Pga59 displays amyloid properties. Using electron microscopy, staining with an amyloid fibre-specific dye and X-ray diffraction experiments, we showed that the predicted amyloid-forming region of Pga59 is sufficient to build up an amyloid fibre in vitro and that recombinant Pga59 can also adopt a cross-β amyloid fibre architecture. Further, mutations impairing Pga59 amyloid assembly led to diminished adhesion to substrates and reduced biofilm production. Immunogold labelling on amyloid structures extracted from C. albicans revealed that Pga59 is used by the fungal cell to assemble amyloids within the cell wall in response to adhesion. Altogether, our results suggest that Pga59 amyloid properties are used by the fungal cell to mediate cell-substrate interactions and biofilm formation.
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