Transition metal nitrite complexes

A comparison of the isostructural [Co(NH3)5NO2]XNO3 and [Co(NH3)5ONO]XNO3, X = Cl- or Br- in relation to nitro-nitrito linkage isomerization and photomechanical effects

A new photoactive cobalt coordination compound, [Co(NH3)5NO2]BrNO3 (I), was obtained. Its crystal structure was shown to be isostructural with previously known [Co(NH3)5NO2]ClNO3 (II) for which linkage isomerization accompanied with mechanical response of the crystal has been already reported. Single crystals of I are transformed into nitrito isomer [Co(NH3)5ONO]BrNO3 (III) on irradiation with blue light (λ = 465 nm) without being destroyed. The crystal structure of III was also solved using single-crystal X-ray diffraction and compared with previously known [Co(NH3)5ONO]ClNO3 (IV). A detailed comparison of the structures of I, II, III and IV, including unit-cell parameters, the distribution of free space (in particular, reaction cavities around the nitro ligand), the lengths of hydrogen bonds, coordination and Voronoi-Dirichlet polyhedra has been performed. Single-crystal X-ray diffraction data were complemented with IR spectra. The effect of the replacement of Cl- by Br- on the crystal structure and on the nitro-nitrito photoisomerization is discussed.

Unraveling the Mechanism of Ammonia Electrooxidation by Coupled Differential Electrochemical Mass Spectrometry and Surface-Enhanced Infrared Absorption Spectroscopic Studies

Ammonia electrooxidation has received considerable attention in recent times due to its potential application in direct ammonia fuel cells, ammonia sensors, and denitrification of wastewater. In this work, we used differential electrochemical mass spectrometry (DEMS) coupled with attenuated total reflection-surface-enhanced infrared absorption (ATR-SEIRA) spectroscopy to study adsorbed species and solution products during the electrochemical ammonia oxidation reaction (AOR) on Pt in alkaline media, and to correlate the product distribution with the surface ad-species. Hydrazine electrooxidation, hydroxylamine electrooxidation/reduction, and nitrite electroreduction on Pt have also been studied to enhance the understanding of the AOR mechanism. NH3, NH2, NH, NO, and NO2 ad-species were identified on the Pt surface with ATR-SEIRA spectroscopy, while N2, N2O, and NO were detected with DEMS as products of the AOR. N2 is formed through the coupling of two NH ad-species and then subsequent further dehydrogenation, while the dimerization of HNOad leads to the formation of N2O. The NH-NH coupling is the rate-determining step (rds) at high potentials, while the first dehydrogenation step is the rds at low potentials. These new spectroscopic results about the AOR and insights could advance the search and design of more effective AOR catalysts.

Synthesis, structural and electrochemical properties of a new family of amino-acid-based coordination complexes

Metalloproteins involved in oxidation-reduction processes in metabolism are fundamental for the wellbeing of every organism. The use of amino-acid-based compounds as ligands for the construction of biomimetic coordination systems represents a promising alternative for the development of new catalysts. Herein is presented a new family of copper, zinc and nickel coordination compounds, which show four-, five- and six- coordination geometries, synthesized using Schiff base ligands obtained from the amino acids L-alanine and L-phenylalanine. Structural analysis and property studies were performed using single-crystal X-ray diffraction data, spectroscopic and electrochemical experiments and DFT calculations. The analysis of the molecular and supramolecular architectures showed that the non-covalent interactions developed in the systems, together with the identity of the metal and the amino acid backbone, are determinants for the formation of the complexes and the stabilization of the resultant geometries. The Cu^II complexes were tested as candidates for the electrochemical conversion reduction of nitrite to NO, finding that the five-coordinate L-phenylalanine complex is the most suitable. Finally, some insights into the rational design of ligands for the construction of biomimetic complexes are suggested.

Relating Excited States to the Dynamics of Macroscopic Strain in Photoresponsive Crystals

Exposure of a photoreactive single crystal to light with a wavelength offset from its absorption maximum can have two distinct effects. The first is the "direct" effect, wherein the excited state generated in individual chemical species is influenced. The second is the "indirect" effect, which describes the penetration of light into the crystal and hence the spatial propagation and completeness of transformation. We illustrate using the nitro-nitrito isomerization of [Co(NH₃)₅NO₂]Cl(NO₃) as an example that the direct and indirect effects can be independently determined. This is achieved by comparing the dynamics of macroscopic crystal deformation (bending curvature and crystal elongation) induced by the photochemical reaction when irradiating a crystal at the absorption maximum and at different band edges (above or below the maximum) of the same band. Quantitative description of the macroscopic strain dynamics in comparison with experiments allowed us to suggest that irradiation at different tails of the same absorption band causes isomerization to proceed via different excited states and an additional photochemical reaction (presumably, reverse nitrito-nitro isomerization) can occur on irradiation at the ligand-field band edges.

Quasi-aromatic Möbius chelates of Cadmium(II) nitrite and/or nitrate

We report the design, structural, spectroscopic and computational characterizations of the two new quasi-aromatic Möbius chelate coordination compounds fabricated from Cd(NO3)2·4H2O and a bulky helical organic ligand derived from benzildihydrazone...

Role of the (pseudo)halido ligand in ruthenium(II) p-cymene α-amino acid complexes in speciation, protein reactivity and cytotoxicity

The reactions of the dimeric complexes [RuX₂(η⁶-p-cymene)]₂ (X = Br, I, SCN) with L-proline (ProH) and trans-4-hydroxy-L-proline (HypH), in methanol in the presence of NaOH, afforded [RuX(κ²N,O-Pro)(η⁶-p-cymene)] (X = Br, 1b; I, 1c; SCN, 1d) and [RuX(κ²N,O-Hyp)(η⁶-p-cymene)] (X = Br, 2b; I, 2c; SCN, 2d), respectively. Alternatively, the one-pot, sequential addition of the appropriate α-amino carboxylate and X^- salt to [RuCl₂(η⁶-p-cymene)]₂ led to [RuX(κ²N,O-Pro)(η⁶-p-cymene)] (X = N₃, 1e; NO₂, 1f; CN 1g) and [Ru(N₃)(κ²N,O-Hyp)(η⁶-p-cymene)] (2e). Complexes [Ru(κ³N,O,O'-O₂CCH(NH₂)(R)O)(η⁶-p-cymene)] (R = CH₂, 3h; R = CHMe, 4h; R = CH₂CH₂, 5h) were prepared from the reaction of [RuCl₂(η⁶-p-cymene)]₂ with the appropriate α-amino acid and NaOH in refluxing isopropanol. Treatment of the L-serine (SerH₂) derivative [RuCl(κ²N,O-SerH)(η⁶-p-cymene)] (3a) with 1,3,5-triaza-7-phosphaadamantane (PTA) in water at reflux produced [Ru(κ²N,O-Ser)(κP-PTA)(η⁶-p-cymene)]Cl ([3i]Cl). The products were isolated in good to excellent yields, and were characterized by elemental analysis, IR and multinuclear NMR spectroscopy. The structures of 1f and 2b-e were ascertained by X-ray diffraction studies. The behaviour of the complexes in water and cell culture medium was investigated by multinuclear NMR and UV-Vis spectroscopy, revealing a considerable influence of the monodentate ligand on the aqueous chemistry. Complexes 1d-e, 2d-e, 3h, 4h and [3i]Cl, showing substantial inertness in aqueous media, were assessed for their cytotoxicity towards A2780 and A2780cisR cancer cell lines and the noncancerous HEK 293T cell line. A selection of compounds was also investigated for Ru uptake in A2780 cells and interactions with cytochrome c as a model protein. Combined, these studies provide insights into the previously debated role of the 'leaving' ligand on the biological activity of Ru(II) arene α-amino acid complexes.

Reactions of nitrite with goethite and surface Fe(II)-goethite complexes

Chemodenitrification-the abiotic (chemical) reduction of nitrite (NO₂^-) by iron (II)-plays an important role in nitrogen cycling due in part to this process serving as a source of nitrous oxide (N₂O). Questions remain about the fate of NO₂^- in the presence of mineral surfaces formed during chemodenitrification, such as iron(III) (hydr) oxides, particularly relative to dissolved iron(II). In this study, stirred-batch kinetic experiments were conducted under anoxic conditions (to mimic iron(III)-reducing conditions) from pH 5.5-8 to investigate NO₂^- reactivity with goethite (FeOOH_(s)) and Fe(II)-treated goethite using wet chemical and attenuated total reflectance-Fourier transform infrared (ATR-FTIR) spectroscopy. Nitrite removal from solution by goethite was more rapid at pH 5.5 than at pH 7 and 8. Spectral changes upon nitrite adsorption imply an inner-sphere surface interaction (monodentate and bidentate) at pH 5.5 based on ATR-FTIR spectra of the nitrite-goethite interface over time. In iron(II)-amended experiments at pH 5.5 with high aqueous Fe(II) in equilibrium with goethite, nitrous oxide was generated, indicating that nitrite removal involved a combination of sorption and reduction processes. The presence of a surface complex resembling protonated nitrite (HONO) with an IR peak near ~1258 cm^-1 was observed in goethite-only and iron(II)-goethite experiments, with a greater abundance of this species observed in the latter treatment. These results might help explain gaseous losses of nitrogen where nitrite and iron(II)/goethite coexist, with implications for nutrient cycling and release of atmospheric air pollutants.

The Metaphosphite (PO2 - ) Anion as a Ligand

The utilization of monomeric, lower phosphorous oxides and oxoanions, such as metaphosphite (PO2 - ), which is the heavier homologue of the common nitrite anion but previously only observed in the gas phase and by matrix isolation, requires new synthetic strategies. Herein, a series of rhenium(I-III) complexes with PO2 - as ligand is reported. Synthetic access was enabled by selective oxygenation of a terminal phosphide complex. Spectroscopic and computational examination revealed slightly stronger σ-donor and comparable π-acceptor properties of PO2 - compared to homologous NO2 - , which is one of the archetypal ligands in coordination chemistry.

Photocrystallographic and spectroscopic studies of a model (N,N,O)-donor square-planar nickel(II) nitro complex: in search of high-conversion and stable photoswitchable materials

A new, cheap, easy-to-synthesize and air-stable photoswitchable nickel(II) complex, QTNiNO2, is reported. The metal centre in QTNiNO2 is coordinated by a nitro group and a [2-methyl-8-amino-quinoline]-1-tetralone ligand. The compound crystallizes in the tetragonal space group I41/a with one complex molecule comprising the asymmetric unit, and the crystals are stable under ambient conditions. Irradiation of the solid-state form of QTNiNO2 with 530-660 nm LED light at 160 K converts the ambidentate nitro moiety fully to the nitrito linkage isomer which is stable up to around 230 K, as indicated by IR spectroscopy measurements. The structures of all species present in the examined crystals and their thermal stability were confirmed via X-ray multi-temperature and photocrystallographic experiments. The impact of temperature on the (photo)isomerization reaction taking place in a single crystal was additionally investigated. The experimental results are supported by computational analyses of crystal packing and intermolecular interactions that influence the isomerization process studied.

Nitrosyl Myoglobins and Their Nitrite Precursors: Crystal Structural and Quantum Mechanics and Molecular Mechanics Theoretical Investigations of Preferred Fe -NO Ligand Orientations in Myoglobin Distal Pockets

The globular dioxygen binding heme protein myoglobin (Mb) is present in several species. Its interactions with the simple nitrogen oxides, namely, nitric oxide (NO) and nitrite, have been known for decades, but the physiological relevance has only recently become more fully appreciated. We previously reported the O-nitrito mode of binding of nitrite to ferric horse heart wild-type (wt) Mb^III and human hemoglobin. We have expanded on this work and report the interactions of nitrite with wt sperm whale (sw) Mb^III and its H64A, H64Q, and V68A/I107Y mutants whose dissociation constants increase in the following order: H64Q < wt < V68A/I107Y < H64A. We also report their X-ray crystal structures that reveal the O-nitrito mode of binding of nitrite to these derivatives. The Mb^II-mediated reductions of nitrite to NO and structural data for the wt and mutant Mb^II-NOs are described. We show that their FeNO orientations vary with distal pocket identity, with the FeNO moieties pointing toward the hydrophobic interiors when the His64 residue is present but toward the hydrophilic exterior when this His64 residue is absent in this set of mutants. This correlates with the nature of H-bonding to the bound NO ligand (nitrosyl O vs N atom). Quantum mechanics and hybrid quantum mechanics and molecular mechanics calculations help elucidate the origin of the experimentally preferred NO orientations. In a few cases, the calculations reproduce the experimentally observed orientations only when the whole protein is taken into consideration.

Wavelength-selective photoisomerisation of nitric oxide and nitrite in a rhodium complex

Photoinduced linkage isomers (PLIs) of NO and NO₂⁻ are selectively generated by an appropriate choice of irradiation wavelength at low temperature within the same molecular complex [Rh(NO)(NO₂)₂(Bu^t₂PH)₂].

Lewis acid stabilization and activation of primary N-nitrosamides

The primary nitrosamides, here exemplified by the N-nitrosoalkylcarbamates, ROC(O)NHNO [R = CH₃ (1), R = C₂H₅ (2)], show a markedly Lewis acid dependent chemistry.

CuNO2 and Cu(+)NO2 Revisited: A Comparative ab Initio and DFT Study

We have reinvestigated CuNO2 and Cu(+)NO2 at ab initio as well as at pure and hybrid DFT levels of approximation employing large ANO basis sets. The systems were fully optimized using the CCSD(T), QCISD(T), BPW91, PBE, PBE0, and B3LYP methods. Several stationary points (minima and transition structures) were found on the related potential energy surfaces (PES). The C2v bidentate η(2)-O,O isomer is calculated to be the most stable species on the CuNO2 PES, followed by two monodentate isomers [Formula: see text] the Cs η(1)-O and C2v η(1)-N species which are higher in energy by 12 and 14 kcal/mol, respectively, at CCSD(T)/Basis-II (where Basis-II is 21s15p10d6f4g/8s7p5d3f2g for Cu; 14s9p4d3f/5s4p3d2f for O and N). On the Cu(+)NO2 PES, the Cs monodentate η(1)-O trans (0 kcal/mol) and cis (+3 kcal/mol at CCSD(T)/Basis-II) isomers are found, followed by the C2v monodentate η(1)-N isomer (+14 kcal/mol at CCSD/Basis-II). In contrast to the pure DFT, the hybrid DFT methods perform reasonably well for predicting the relative stabilities (except for η(1)-N of CuNO2) and structures; however, their predictions of the bond dissociation energies are less reliable (for CuNO2 the difference is as much as 10 kcal/mol compared to the CCSD(T) values). The performance of the QCISD(T) method was analyzed, and, furthermore, the issue of symmetry breaking was investigated.

Two types of nitrito support for μ4-oxido-bridged [Cu4] complexes: synthesis, crystal structures, magnetic properties and DFT analysis

In situ generated NO₂⁻ and externally added NO₂⁻ and AcO⁻ ions have been utilized for the isolation of μ₄-oxido-bridged Cu₄ aggregates showing magnetic coupling which can be rationalized by DFT calculations.

Access to Formally Ni(I) States in a Heterobimetallic NiZn System

Heterobimetallic NiZn complexes featuring metal centers in distinct coordination environments have been synthesized using diimine-dioxime ligands as binucleating scaffolds. A tetramethylfuran-containing ligand derivative enables a stable one-electron-reduced S = 1/2 species to be accessed using Cp2Co as a chemical reductant. The resulting pseudo-square planar complex exhibits spectroscopic and crystallographic characteristics of a ligand-centered radical bound to a Ni(II) center. Upon coordination of a π-acidic ligand such as PPh3, however, a five-coordinate Ni(I) metalloradical is formed. The electronic structures of these reduced species provide insight into the subtle effects of ligand structure on the potential and reversibility of the NiII/I couple for complexes of redox-active tetraazamacrocycles.

Linkage isomerization in heme-NOx compounds: understanding NO, nitrite, and hyponitrite interactions with iron porphyrins

Nitric oxide (NO) and its derivatives such as nitrite and hyponitrite are biologically important species of relevance to human health. Much of their physiological relevance stems from their interactions with the iron centers in heme proteins. The chemical reactivities displayed by the heme-NOx species (NOx = NO, nitrite, hyponitrite) are a function of the binding modes of the NOx ligands. Hence, an understanding of the types of binding modes extant in heme-NOx compounds is important if we are to unravel the inherent chemical properties of these NOx metabolites. In this Forum Article, the experimentally characterized linkage isomers of heme-NOx models and proteins are presented and reviewed. Nitrosyl linkage isomers of synthetic iron and ruthenium porphyrins have been generated by photolysis at low temperatures and characterized by spectroscopy and density functional theory calculations. Nitrite linkage isomers in synthetic metalloporphyrin derivatives have been generated from photolysis experiments and in low-temperature matrices. In the case of nitrite adducts of heme proteins, both N and O binding have been determined crystallographically, and the role of the distal H-bonding residue in myoglobin in directing the O-binding mode of nitrite has been explored using mutagenesis. To date, only one synthetic metalloporphyrin complex containing a hyponitrite ligand (displaying an O-binding mode) has been characterized by crystallography. This is contrasted with other hyponitrite binding modes experimentally determined for coordination compounds and computationally for NO reductase enzymes. Although linkage isomerism in heme-NOx derivatives is still in its infancy, opportunities now exist for a detailed exploration of the existence and stabilities of the metastable states in both heme models and heme proteins.

Azoligands as Bridged in Macrocyclic Dinickel Complexes

The coordination chemistry of dinickel macrocyclic hexaamine-dithiophenolate complexes of Robson-type with azoligands is presented in this microreview. All complexes have been characterised by IR-,UV/Visspectroscopy, and X-ray crystallography. The bioctahedral transition metal complexes of the type [(L6)Ni2(μ-L')]+ exhibit a rich coordination chemistry since the active coordination site L' is accessible for a wide range of exogenous coligands.

Rare example of mu-nitrito-1kappa2O,O':2kappaO coordinating mode in copper(II) nitrite complexes with monoanionic tridentate Schiff base ligands: structure, magnetic, and electrochemical properties

Three new copper(II) complexes, [CuL(1)(NO(2))](n) (1), [CuL(2)(NO(2))] (2), and [CuL(3)(NO(2))] (3), with three similar tridentate Schiff base ligands [HL(1) = 6-amino-3-methyl-1-phenyl-4-azahept-2-en-1-one, HL(2) = 6-amino-3-methyl-1-phenyl-4-azahex-2-en-1-one, and HL(3) = 6-diethylamino-3-methyl-1-phenyl-4-azahex-2-en-1-one] have been synthesized and characterized structurally and magnetically. In all three complexes, the tridentate Schiff base ligand and one oxygen atom of the nitrite ion constitute the equatorial plane around Cu(II), whereas the second oxygen atom of the nitrite ligand coordinates to one of the axial positions. In 1, this axially coordinated oxygen atom of the nitrite ligand also coordinates weakly to the other axial position of a Cu(II) ion of another unit to form a one-dimensional chain with the mu-nitrito-1kappa(2)O,O':2kappaO bridging mode. Complexes 2 and 3 are discrete monomers that are joined together by intermolecular H bonds and C-H....pi interactions in 2 and by only C-H....pi interactions in 3. A weak antiferromagnetism (J = -1.96(2) cm(-1)) is observed in complex 1 due to its asymmetric nitrite bridging. Complexes 2 and 3 show very weak antiferromagnetic interactions (J = -0.089 and -0.096 cm(-1), respectively) attributed to the presence of intermolecular H-bonding and C-H....pi interactions. The corresponding Cu(I) species produced by the electrochemical reduction of complexes 1 and 2 disproportionate to Cu(0) and Cu(2+,) whereas the reduced Cu(I) species of complex 3 seems to be stable presumably due to a higher tetrahedral distortion of the equatorial plane in 3 compared to that in 1 and 2.

Spectroelectrochemistry and DFT Analysis of a New {RuNO}n Redox System with Multifrequency EPR Suggesting Conformational Isomerism in the {RuNO}7 State

The compound [Ru(NO)(bpym)(terpy)](PF6)3, bpym = 2,2'-bipyrimidine and terpy = 2,2':6',2"-terpyridine, with a {RuNO}6 configuration (angle Ru-N-O 175.2(4) degrees ) was obtained from the structurally characterized precursor [Ru(NO2)(bpym)(terpy)](PF6), which shows bpym-centered reduction and metal-centered oxidation, as evident from EPR spectroscopy. The relatively labile [Ru(NO)(bpym)(terpy)](3+), which forms a structurally characterized acetonitrile substitution product [Ru(CH3CN)(bpym)(terpy)](PF6)2 upon treatment with CH3OH/CH3CN, is electrochemically reduced in three one-electron steps of which the third, leading to neutral [Ru(NO)(bpym)(terpy)], involves electrode adsorption. The first-two reduction processes cause shifts of nu(NO) from 1957 via 1665 to 1388 cm(-1), implying a predominantly NO-centered electron addition. UV-vis-NIR Spectroscopy shows long-wavelength ligand-to-ligand charge transfer absorptions for [Ru(II)(NO(-I))(bpym)(terpy)]+ in the visible region, whereas the paramagnetic intermediate [Ru(NO)(bpym)(terpy)](2+) exhibits no distinct absorption maximum above 309 nm. EPR spectroscopy of the latter at 9.5, 95, and 190 GHz shows the typical invariant pattern of the {RuNO}7 configuration; however, the high-frequency measurements at 4 and 10 K reveal a splitting of the g1 and g2 components, which is tentatively attributed to conformers resulting from the bending of RuNO. DFT calculations support the assignments of oxidation states and the general interpretation of the electronic structure.