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For: Inobe T, Arai M, Nakao M, Ito K, Kamagata K, Makio T, Amemiya Y, Kihara H, Kuwajima K. Equilibrium and kinetics of the allosteric transition of GroEL studied by solution X-ray scattering and fluorescence spectroscopy. J Mol Biol 2003;327:183-91. [PMID: 12614617 DOI: 10.1016/s0022-2836(03)00087-1] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Number Cited by Other Article(s)
1
Chaperonin-assisted protein folding: a chronologue. Q Rev Biophys 2020;53:e4. [PMID: 32070442 DOI: 10.1017/s0033583519000143] [Citation(s) in RCA: 37] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
2
Sysoeva TA. Assessing heterogeneity in oligomeric AAA+ machines. Cell Mol Life Sci 2017;74:1001-1018. [PMID: 27669691 PMCID: PMC11107579 DOI: 10.1007/s00018-016-2374-z] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2016] [Revised: 09/13/2016] [Accepted: 09/19/2016] [Indexed: 10/20/2022]
3
Zheng X, Bi C, Li Z, Podariu M, Hage DS. Analytical methods for kinetic studies of biological interactions: A review. J Pharm Biomed Anal 2015;113:163-80. [PMID: 25700721 PMCID: PMC4516701 DOI: 10.1016/j.jpba.2015.01.042] [Citation(s) in RCA: 51] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2014] [Revised: 01/16/2015] [Accepted: 01/19/2015] [Indexed: 01/13/2023]
4
Chandak MS, Nakamura T, Makabe K, Takenaka T, Mukaiyama A, Chaudhuri TK, Kato K, Kuwajima K. The H/D-exchange kinetics of the Escherichia coli co-chaperonin GroES studied by 2D NMR and DMSO-quenched exchange methods. J Mol Biol 2013;425:2541-60. [PMID: 23583779 DOI: 10.1016/j.jmb.2013.04.008] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2013] [Revised: 03/29/2013] [Accepted: 04/05/2013] [Indexed: 11/18/2022]
5
Marzen S, Garcia HG, Phillips R. Statistical mechanics of Monod-Wyman-Changeux (MWC) models. J Mol Biol 2013;425:1433-60. [PMID: 23499654 DOI: 10.1016/j.jmb.2013.03.013] [Citation(s) in RCA: 72] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2013] [Revised: 03/03/2013] [Accepted: 03/04/2013] [Indexed: 11/27/2022]
6
Zhang Q, Chen J, Kuwajima K, Zhang HM, Xian F, Young NL, Marshall AG. Nucleotide-induced conformational changes of tetradecameric GroEL mapped by H/D exchange monitored by FT-ICR mass spectrometry. Sci Rep 2013;3:1247. [PMID: 23409238 PMCID: PMC3570780 DOI: 10.1038/srep01247] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2012] [Accepted: 11/06/2012] [Indexed: 11/29/2022]  Open
7
Chen J, Makabe K, Nakamura T, Inobe T, Kuwajima K. Dissecting a bimolecular process of MgATP²- binding to the chaperonin GroEL. J Mol Biol 2011;410:343-56. [PMID: 21620859 DOI: 10.1016/j.jmb.2011.05.018] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2011] [Revised: 04/17/2011] [Accepted: 05/11/2011] [Indexed: 11/29/2022]
8
Kovács E, Sun Z, Liu H, Scott DJ, Karsisiotis AI, Clarke AR, Burston SG, Lund PA. Characterisation of a GroEL single-ring mutant that supports growth of Escherichia coli and has GroES-dependent ATPase activity. J Mol Biol 2009;396:1271-83. [PMID: 20006619 DOI: 10.1016/j.jmb.2009.11.074] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2009] [Revised: 11/26/2009] [Accepted: 11/30/2009] [Indexed: 11/30/2022]
9
Chaperonin-mediated protein folding: using a central cavity to kinetically assist polypeptide chain folding. Q Rev Biophys 2009;42:83-116. [PMID: 19638247 DOI: 10.1017/s0033583509004764] [Citation(s) in RCA: 121] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
10
Hosono K, Ueno T, Taguchi H, Motojima F, Zako T, Yoshida M, Funatsu T. Kinetic analysis of conformational changes of GroEL based on the fluorescence of tyrosine 506. Protein J 2009;27:461-8. [PMID: 19048360 DOI: 10.1007/s10930-008-9157-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
11
Asymmetry of the GroEL-GroES complex under physiological conditions as revealed by small-angle x-ray scattering. Biophys J 2007;94:1392-402. [PMID: 17981896 DOI: 10.1529/biophysj.107.114710] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
12
Cliff MJ, Limpkin C, Cameron A, Burston SG, Clarke AR. Elucidation of steps in the capture of a protein substrate for efficient encapsulation by GroE. J Biol Chem 2006;281:21266-21275. [PMID: 16684774 DOI: 10.1074/jbc.m601605200] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
13
Kuwajima K, Inobe T, Arai M. The allosteric transition of the chaperonin groel fromescherichia coli as studied by solution X-ray scattering. Macromol Res 2006. [DOI: 10.1007/bf03218504] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
14
Yoshimi T, Hongo K, Mizobata T, Kawata Y. Multiple Structural Transitions of the GroEL Subunit Are Sensitive to Intermolecular Interactions with Cochaperonin and Refolding Polypeptide. ACTA ACUST UNITED AC 2006;139:407-19. [PMID: 16567406 DOI: 10.1093/jb/mvj043] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
15
Sot B, von Germar F, Mäntele W, Valpuesta JM, Taneva SG, Muga A. Ionic interactions at both inter-ring contact sites of GroEL are involved in transmission of the allosteric signal: a time-resolved infrared difference study. Protein Sci 2005;14:2267-74. [PMID: 16081650 PMCID: PMC2253480 DOI: 10.1110/ps.051469605] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
16
Karplus M, Gao YQ, Ma J, van der Vaart A, Yang W. Protein structural transitions and their functional role. PHILOSOPHICAL TRANSACTIONS. SERIES A, MATHEMATICAL, PHYSICAL, AND ENGINEERING SCIENCES 2005;363:331-356. [PMID: 15664887 DOI: 10.1098/rsta.2004.1496] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
17
van der Vaart A, Ma J, Karplus M. The unfolding action of GroEL on a protein substrate. Biophys J 2005;87:562-73. [PMID: 15240489 PMCID: PMC1304377 DOI: 10.1529/biophysj.103.037333] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
18
Inobe T, Kuwajima K. Phi value analysis of an allosteric transition of GroEL based on a single-pathway model. J Mol Biol 2004;339:199-205. [PMID: 15123431 DOI: 10.1016/j.jmb.2004.03.026] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2004] [Revised: 03/08/2004] [Accepted: 03/08/2004] [Indexed: 11/29/2022]
19
Amir A, Horovitz A. Kinetic analysis of ATP-dependent inter-ring communication in GroEL. J Mol Biol 2004;338:979-88. [PMID: 15111061 DOI: 10.1016/j.jmb.2004.02.076] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2003] [Revised: 02/23/2004] [Accepted: 02/25/2004] [Indexed: 10/26/2022]
20
Taniguchi M, Yoshimi T, Hongo K, Mizobata T, Kawata Y. Stopped-flow Fluorescence Analysis of the Conformational Changes in the GroEL Apical Domain. J Biol Chem 2004;279:16368-76. [PMID: 14734563 DOI: 10.1074/jbc.m311806200] [Citation(s) in RCA: 36] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]  Open
21
Inobe T, Kikushima K, Makio T, Arai M, Kuwajima K. The allosteric transition of GroEL induced by metal fluoride-ADP complexes. J Mol Biol 2003;329:121-34. [PMID: 12742022 DOI: 10.1016/s0022-2836(03)00409-1] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
22
Arai M, Inobe T, Maki K, Ikura T, Kihara H, Amemiya Y, Kuwajima K. Denaturation and reassembly of chaperonin GroEL studied by solution X-ray scattering. Protein Sci 2003;12:672-80. [PMID: 12649424 PMCID: PMC2323844 DOI: 10.1110/ps.0233603] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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