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Maji B, Duan XH, Jüstel PM, Byrne PA, Ofial AR, Mayr H. Nucleophilicities and Nucleofugalities of Thio- and Selenoethers. Chemistry 2021; 27:11367-11376. [PMID: 34002899 PMCID: PMC8456842 DOI: 10.1002/chem.202100977] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2021] [Indexed: 12/19/2022]
Abstract
Rate constants for the reactions of dialkyl chalcogenides with laser flash photolytically generated benzhydrylium ions have been measured photometrically to integrate them into the comprehensive benzhydrylium‐based nucleophilicity scale. Combining these rate constants with the previously reported equilibrium constants for the same reactions provided the corresponding Marcus intrinsic barriers and made it possible to quantify the leaving group abilities (nucleofugalities) of dialkyl sulfides and dimethyl selenide. Due to the low intrinsic barriers, dialkyl chalcogenides are fairly strong nucleophiles (comparable to pyridine and N‐methylimidazole) as well as good nucleofuges; this makes them useful group‐transfer reagents.
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Affiliation(s)
- Biplab Maji
- Department Chemie, Ludwig-Maximilians-Universität München, Butenandtstr. 5-13, 81377, München, Germany.,Department of Chemical Sciences, Indian Institute of Science Education and Research Kolkata, Mohanpur, 741246, India
| | - Xin-Hua Duan
- Department Chemie, Ludwig-Maximilians-Universität München, Butenandtstr. 5-13, 81377, München, Germany.,Department of Chemistry, School of Chemistry, Xi'an Key Laboratory of Sustainable Energy Material Chemistry, Xi'an Jiaotong University, No. 28, Xianning West Road, Xi'an, 710049, P. R. China
| | - Patrick M Jüstel
- Department Chemie, Ludwig-Maximilians-Universität München, Butenandtstr. 5-13, 81377, München, Germany
| | - Peter A Byrne
- Department Chemie, Ludwig-Maximilians-Universität München, Butenandtstr. 5-13, 81377, München, Germany.,School of Chemistry, University College Cork, College Road, Cork, Ireland
| | - Armin R Ofial
- Department Chemie, Ludwig-Maximilians-Universität München, Butenandtstr. 5-13, 81377, München, Germany
| | - Herbert Mayr
- Department Chemie, Ludwig-Maximilians-Universität München, Butenandtstr. 5-13, 81377, München, Germany
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Uggerud E. The Factors Determining Reactivity in Nucleophilic Substitution. ADVANCES IN PHYSICAL ORGANIC CHEMISTRY 2017. [DOI: 10.1016/bs.apoc.2017.07.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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3
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Zhou H, Huang Y, Zhang Y, Song D, Huang H, Zhong C, Ye G. Hydrogen abstraction of carbon/phosphorus-containing radicals in photoassisted polymerization. RSC Adv 2016. [DOI: 10.1039/c6ra00156d] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023] Open
Abstract
Free-radical-promoted photopolymerization has successfully improved the curing performance in cationic photopolymerization and is now employed in promoted autoxidation.
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Affiliation(s)
- Hua Zhou
- Key Laboratory for Major Obstetric Diseases of Guangdong Province
- The Third Affiliated Hospital of Guangzhou Medical University
- Guangzhou 510150
- People's Republic of China
| | - Yugang Huang
- Department of Chemistry
- School of Pharmaceutical Sciences
- Guangzhou Medical University
- Guangzhou 511436
- People's Republic of China
| | - Yun Zhang
- Department of Chemistry
- School of Pharmaceutical Sciences
- Guangzhou Medical University
- Guangzhou 511436
- People's Republic of China
| | - Dandan Song
- Department of Chemistry
- School of Pharmaceutical Sciences
- Guangzhou Medical University
- Guangzhou 511436
- People's Republic of China
| | - Hong Huang
- Department of Chemistry
- School of Pharmaceutical Sciences
- Guangzhou Medical University
- Guangzhou 511436
- People's Republic of China
| | - Cheng Zhong
- College of Chemistry and Molecular Sciences
- Wuhan University
- Wuhan 430072
- People's Republic of China
| | - Guodong Ye
- Department of Chemistry
- School of Pharmaceutical Sciences
- Guangzhou Medical University
- Guangzhou 511436
- People's Republic of China
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4
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Hoz S. Physical Organic Chemistry (POC) Makes Chemistry a Science: A Personal Reflection on POC. Isr J Chem 2016. [DOI: 10.1002/ijch.201400183] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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5
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Mayr H, Breugst M, Ofial AR. Farewell to the HSAB treatment of ambident reactivity. Angew Chem Int Ed Engl 2011; 50:6470-505. [PMID: 21726020 DOI: 10.1002/anie.201007100] [Citation(s) in RCA: 208] [Impact Index Per Article: 14.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2010] [Indexed: 11/11/2022]
Abstract
The concept of hard and soft acids and bases (HSAB) proved to be useful for rationalizing stability constants of metal complexes. Its application to organic reactions, particularly ambident reactivity, has led to exotic blossoms. By attempting to rationalize all the observed regioselectivities by favorable soft-soft and hard-hard as well as unfavorable hard-soft interactions, older treatments of ambident reactivity, which correctly differentiated between thermodynamic and kinetic control as well as between different coordination states of ionic substrates, have been replaced. By ignoring conflicting experimental results and even referring to untraceable experimental data, the HSAB treatment of ambident reactivity has gained undeserved popularity. In this Review we demonstrate that the HSAB as well as the related Klopman-Salem model do not even correctly predict the behavior of the prototypes of ambident nucleophiles and, therefore, are rather misleading instead of useful guides. An alternative treatment of ambident reactivity based on Marcus theory will be presented.
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Affiliation(s)
- Herbert Mayr
- Department Chemie, Ludwig-Maximilians-Universität München, Butenandtstrasse 5-13 (Haus F), 81377 München, Germany.
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Pereira JC, Serpa C, Arnaut LG, Formosinho SJ. Molecular factor analysis in self-exchange electron transfer reactions in solution. J Mol Liq 2010. [DOI: 10.1016/j.molliq.2010.07.007] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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7
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Barroso M, Arnaut LG, Formosinho SJ. Tunnelling corrections in hydrogen abstractions by excited-state ketones. J PHYS ORG CHEM 2010. [DOI: 10.1002/poc.1708] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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Breugst M, Zipse H, Guthrie J, Mayr H. Marcus Analysis of Ambident Reactivity. Angew Chem Int Ed Engl 2010; 49:5165-9. [DOI: 10.1002/anie.201001574] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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10
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Fernández I, Frenking G, Uggerud E. The Interplay between Steric and Electronic Effects in SN2 Reactions. Chemistry 2009; 15:2166-75. [DOI: 10.1002/chem.200801833] [Citation(s) in RCA: 71] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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Arnaut LG, Formosinho SJ. The rates of S(N)2 reactions and their relation to molecular and solvent properties. Chemistry 2007; 13:8018-28. [PMID: 17616960 DOI: 10.1002/chem.200700276] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
The energy barriers of symmetrical methyl exchanges in the gas phase have been calculated with the reaction path of the intersecting/interacting-state model (ISM). Reactive bond lengths increase down a column of the Periodic Table and compensate for the decrease in the force constants, which explains the near constancy of the intrinsic barriers in the following series of nucleophiles: F(-) approximately Cl(-) approximately Br(-) approximately I(-). This compensation is absent along the rows of the Periodic Table and the trend in the reactivity is dominated by the increase in the electrophilicity index of the nucleophile in the series C<N<O<F. Solvent effects have been quantitatively incorporated into the ISM model through a correlation between electrophilicity and the solvent acceptor number. This correlation is transferable between nucleophiles and solvents and allows the methyl transfer rate constants in solution to be calculated with remarkable simplicity and accuracy. The relationship between the S(N)2 and electron-transfer mechanisms is clarified and it is shown that smaller solvent static effects should be expected for electron transfer in the absence of a thermodynamic driving force.
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Affiliation(s)
- Luis G Arnaut
- Chemistry Department, University of Coimbra, P-3049 Coimbra Codex, Portugal.
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Abstract
The potential energy profiles of 18 identity S(N)2 reactions have been estimated by using G2-type quantum-chemical calculations. The reactions are: X- + CH3-X --> X-CH3 + X- and XH + CH3-XH+ --> +HX-CH3 + XH (X = NH2, OH, F, PH2, SH, Cl, AsH2, SeH, Br). Despite the charge difference, the barrier heights and the geometrical requirements upon going from the reactant to the transition structure are surprisingly similar for X- and XH. The barrier heights decrease on going from left to right in the periodic table, and increasing ionization energy (of X- and XH) is correlated with decreasing barrier. The observed trends are explained in terms of substrates with stronger electrostatic character giving rise to lower energetic barriers due to decreased electron repulsion in the transition structure. On the basis of this study, the relationship between the kinetic concept of nucleophilicity and the thermodynamic concept of basicity has been analyzed and clarified. Since the trends in intrinsic nucleophilicity (only defined for identity reactions) and basicity are opposite, overall nucleophilicity (defined for any reaction) will be determined by the relative contribution of the two factors. Only for strongly exothermic reactions will basicity and nucleophilicity be matching.
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Affiliation(s)
- Einar Uggerud
- Department of Chemistry, University of Oslo, P. O. Box 1033, Blindern, 0315 Oslo, Norway.
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Wolk JL, Rozental E, Basch H, Hoz S. Strain energy release and intrinsic barriers in internal nucleophilic reactions. J Org Chem 2007; 71:3876-9. [PMID: 16674063 DOI: 10.1021/jo060215c] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
This paper reports computational data for the energetics of internal attacks, both in ring-opening reactions (eq 3) where strain energy is released and in model, strain-free systems (eq 4). A comparison is drawn with the corresponding bimolecular processes. The exothermicity of three-membered ring-opening reactions is significantly larger than that of the four-membered ring systems. However, using the Marcus equation, it is shown that the higher reactivity of the three-membered rings is intrinsic to the system and does not stem only from a higher thermodynamic driving force. The intrinsic barriers for the strain-free reactions are shown to be dominated by the position of the nucleophilic and nucleofugic atoms in the periodic table, as in the bimolecular SN2 reactions, although a pi rather than a sigma bond is formed in these reactions.
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Affiliation(s)
- Joel L Wolk
- Department of Chemistry, Bar-Ilan University, Ramat-Gan, Israel 52900
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Barroso M, Pereira JC, Pais AACC, Arnaut LG, Formosinho SJ. Molecular factor analysis in atom-transfer reactions. Mol Phys 2007. [DOI: 10.1080/00268970500417085] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
Affiliation(s)
- M. Barroso
- a Departamento de Química , Universidade de Coimbra , 3004-535 Coimbra, Portugal
| | - J. C. Pereira
- a Departamento de Química , Universidade de Coimbra , 3004-535 Coimbra, Portugal
| | - A. A. C. C. Pais
- a Departamento de Química , Universidade de Coimbra , 3004-535 Coimbra, Portugal
| | - L. G. Arnaut
- a Departamento de Química , Universidade de Coimbra , 3004-535 Coimbra, Portugal
| | - S. J. Formosinho
- a Departamento de Química , Universidade de Coimbra , 3004-535 Coimbra, Portugal
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Barroso M, Arnaut LG, Formosinho SJ. Absolute Rate Calculations. Proton Transfers in Solution. J Phys Chem A 2007; 111:591-602. [PMID: 17249748 DOI: 10.1021/jp065458n] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The reaction path of the intersecting-state model is used in transition-state theory with the semiclassical correction for tunneling (ISM/scTST) to calculate the rates of proton-transfer reactions from hydrogen-bond energies, reaction energies, electrophilicity indices, bond lengths, and vibration frequencies of the reactive bonds. ISM/scTST calculations do not involve adjustable parameters. The calculated proton-transfer rates are within 1 order of magnitude of the experimental ones at room temperature, and cover very diverse systems, such as deprotonations of nitroalkanes, ketones, HCN, carboxylic acids, and excited naphthols. The calculated temperature dependencies and kinetic isotope effects are also in good agreement with the experimental data. These calculations elucidate the roles of the reaction energy, electrophilicity, structural parameters, hydrogen bonds, tunneling, and solvent in the reactivity of acids and bases. The efficiency of the method makes it possible to run absolute rate calculations through the Internet.
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Affiliation(s)
- Monica Barroso
- Chemistry Department, University of Coimbra, P-3049 Coimbra Codex, Portugal
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16
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Serpa C, Gomes PJS, Arnaut LG, Formosinho SJ, Pina J, de Melo JS. Electron Transfer in Supercritical Carbon Dioxide: Ultraexothermic Charge Recombination at the End of the “Inverted Region”. Chemistry 2006; 12:5014-23. [PMID: 16548016 DOI: 10.1002/chem.200500727] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Charge-recombination rates in contact radical-ion pairs, formed between aromatic hydrocarbons and nitriles in supercritical CO(2) and heptane, decrease with the exothermicity of the reactions until they reach -70 kcal mol(-1), but from there on an increase is observed. The first decrease in rate is typical of the "inverted region" of electron-transfer reactions. The change to an increase in the rate for ultra-exothermic electron transfer indicates a new free-energy relationship. We show that the resulting "double-inverted region" is not due to a change in mechanism. It is an intrinsic property of electron-transfer reactions, and it is due to the increase of the reorganisation energy with the reaction exothermicity.
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Affiliation(s)
- Carlos Serpa
- Departamento de Química, Universidade de Coimbra, 3004-535 Coimbra, Portugal
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17
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Barroso M, Arnaut LG, Formosinho SJ. Absolute Rate Calculations: Atom and Proton Transfers in Hydrogen-Bonded Systems. Chemphyschem 2005; 6:363-71. [PMID: 15751360 DOI: 10.1002/cphc.200400285] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
We calculate energy barriers of atom- and proton-transfer reactions in hydrogen-bonded complexes in the gas phase. Our calculations do not involve adjustable parameters and are based on bond-dissociation energies, ionization potentials, electron affinities, bond lengths, and vibration frequencies of the reactive bonds. The calculated barriers are in agreement with experimental data and high-level ab initio calculations. We relate the height of the barrier with the molecular properties of the reactants and complexes. The structure of complexes with strong hydrogen bonds approaches that of the transition state, and substantially reduces the barrier height. We calculate the hydrogen-abstraction rates in H-bonded systems using the transition-state theory with the semiclassical correction for tunneling, and show that they are in excellent agreement with the experimental data. H-bonding leads to an increase in tunneling corrections at room temperature.
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Affiliation(s)
- Mónica Barroso
- Department of Chemistry, University of Coimbra, 3000 Coimbra, Portugal.
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18
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Serpa C, Arnaut LG, Formosinho SJ, Naqvi KR. Calculation of triplet-triplet energy transfer rates from emission and absorption spectra. The quenching of hemicarcerated triplet biacetyl by aromatic hydrocarbons. Photochem Photobiol Sci 2003; 2:616-23. [PMID: 12803087 DOI: 10.1039/b300049d] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The kinetics of triplet-triplet (T-T) energy transfer have been analysed with a view to linking theories of chemical reactions (involving the rupture and formation of bonds) with theories of processes, such as electron transfer or energy transfer, which preserve chemical bonding. As for the latter, our analysis does not support the claim that, of the two rival expressions for T-T energy transfer, both rooted in the golden rule, only one is applicable to electron transfer or T-T transfer. Though the two expressions do reflect different standpoints, the distinction is eroded by the assumption of a delta-function distribution for the vibrational spectrum. It is shown that theories of chemical reactions also furnish estimates of Franck-Condon factors; rates of chemical reactions and chemical processes are both related to the properties (strengths and lengths) of the reactive bonds, but differ in the mode of energy dissipation. The relationship between the rates of reactions and processes presents new possibilities for a unified view of chemical reactivity.
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Affiliation(s)
- Carlos Serpa
- Departamento de Química, Universidade de Coimbra, P-3049 Coimbra, Portugal
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Arnaut LG, Pais AACC, Formosinho SJ, Barroso M. Absolute rate calculations for atom abstractions by radicals: energetic, structural and electronic factors. J Am Chem Soc 2003; 125:5236-46. [PMID: 12708877 DOI: 10.1021/ja029298e] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
We calculate transition-state energies of atom-transfer reactions from reaction energies, electrophilicity indices, bond lengths, and vibration frequencies of the reactive bonds. Our calculations do not involve adjustable parameters and uncover new patterns of reactivity. The generality of our model is demonstrated comparing the vibrationally adiabatic barriers obtained for 100 hydrogen-atom transfers with the corresponding experimental activation energies, after correction for the heat capacities of reactants and transition state. The rates of half of these reactions are calculated using the Transition-State Theory with the vibrationally adiabatic path of the Intersecting-State Model and the semiclassical correction for tunneling (ISM/scTST). The calculated rates are within an order of magnitude of the experimental ones at room temperature. The temperature dependencies and kinetic isotope effects of selected systems are also in good agreement with the available experimental data. Our model elucidates the roles of the reaction energy, electrophilicity, structural parameters, and tunneling in the reactivity of these systems and can be applied to make quantitative predictions for new systems.
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Affiliation(s)
- Luis G Arnaut
- Universidade de Coimbra, Departamento de Química, P-3049 Coimbra Codex, Portugal.
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Barroso M, Arnaut LG, Formosinho SJ. Intersecting-state model calculations on fast and ultrafast excited-state proton transfers in naphthols and substituted naphthols. J Photochem Photobiol A Chem 2002. [DOI: 10.1016/s1010-6030(02)00261-7] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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