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Omar YM, Santucci G, Afarinkia K. tert-Butyl(2-oxo-2 H-pyran-5-yl)carbamate as the First Chameleon Diene Bearing an Electron-Donating Substituent. Molecules 2022; 27:molecules27175666. [PMID: 36080432 PMCID: PMC9458009 DOI: 10.3390/molecules27175666] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2022] [Revised: 08/10/2022] [Accepted: 08/29/2022] [Indexed: 11/16/2022] Open
Abstract
The 2(H)-pyran-2-one bearing electron-donating tert-butylcarbamate (BocNH-) group at the 5- position is a “chameleon” diene and undergoes efficient Diels–Alder cycloadditions with alkene dienophiles with both electron-rich and electron-deficient substituents. Cycloadditions afford the 5-substituted bicyclic lactone cycloadducts regardless of the electronic nature of the dienophile. However, cycloadditions with electronically matched electron-deficient dienophiles proceed faster than those with electronically mismatched electron-rich dienophiles.
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Affiliation(s)
- Yasser M. Omar
- Institute of Cancer Therapeutics, University of Bradford, Bradford BD7 1DP, UK
- Department Pharmaceutical Organic Chemistry, Faculty of Pharmacy, Assiut University, Assiut 71526, Egypt
| | - Giulia Santucci
- Department Pharmaceutical Organic Chemistry, Faculty of Pharmacy, Assiut University, Assiut 71526, Egypt
| | - Kamyar Afarinkia
- Institute of Cancer Therapeutics, University of Bradford, Bradford BD7 1DP, UK
- School of Biomedical Sciences, University of West London, London W5 5RF, UK
- Correspondence:
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2
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Saktura M, Grzelak P, Dybowska J, Albrecht Ł. Asymmetric Synthesis of [2.2.2]-Bicyclic Lactones via All-Carbon Inverse-Electron-Demand Diels-Alder Reaction. Org Lett 2020; 22:1813-1817. [PMID: 32065757 PMCID: PMC7497662 DOI: 10.1021/acs.orglett.0c00138] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2020] [Indexed: 01/30/2023]
Abstract
In this paper, a new cycloaddition between α,β-unsaturated aldehydes and coumalates realized under dienamine activation has been described. The reaction proceeds regioselectively with the distal double bond of the dienamine system acting as electron-rich dienophile. It leads to the formation of biologically relevant [2.2.2]-bicyclic lactones. Their functionalization potential has been confirmed in selected, diastereoselective transformations.
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Affiliation(s)
| | | | - Joanna Dybowska
- Institute of Organic Chemistry, Lodz University of Technology, Żeromskiego 116, 90-924 Łódź, Poland
| | - Łukasz Albrecht
- Institute of Organic Chemistry, Lodz University of Technology, Żeromskiego 116, 90-924 Łódź, Poland
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3
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Affiliation(s)
- Quan Cai
- Department of Chemistry and Research Center for Molecular Recognition and SynthesisFudan University, 220 Handan Rd Shanghai 200433 China
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4
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Abdullahi MH, Thompson LM, Bearpark MJ, Vinader V, Afarinkia K. The role of substituents in retro Diels–Alder extrusion of CO2 from 2(H)-pyrone cycloadducts. Tetrahedron 2016. [DOI: 10.1016/j.tet.2016.07.066] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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6
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Synthesis of a pseudo-disaccharide library and its application to the characterisation of the heparanase catalytic site. PLoS One 2013; 8:e82111. [PMID: 24260588 PMCID: PMC3832595 DOI: 10.1371/journal.pone.0082111] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2013] [Accepted: 10/19/2013] [Indexed: 12/15/2022] Open
Abstract
A novel methodology is described for the efficient and divergent synthesis of pseudodisaccharides, molecules comprising of amino carbasugar analogues linked to natural sugars. The methodology is general and enables the introduction of diversity both at the carbasugar and the natural sugar components of the pseudodisaccharides. Using this approach, a series of pseudodisaccharides are synthesised that mimic the repeating backbone unit of heparan sulfate, and are tested for inhibition of heparanase, a disease-relevant enzyme that hydrolyses heparan sulfate. A new homology model of human heparanase is described based on a family 79 β-glucuronidase. This model is used to postulate a computational rationale for the observed activity of the different pseudodisaccharides and provide valuable information that informs the design of potential inhibitors of this enzyme.
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7
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Silva, Jr. LF, Olofsson B. Hypervalent iodine reagents in the total synthesis of natural products. Nat Prod Rep 2011; 28:1722-54. [DOI: 10.1039/c1np00028d] [Citation(s) in RCA: 247] [Impact Index Per Article: 17.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
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8
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Afarinkia K, Abdullahi MH, Scowen IJ. A Synthesis of Carbasugar−Sugar Pseudodisaccharides via a Cycloaddition−Cycloreversion Reaction of 2H-Pyran-2-ones. Org Lett 2010; 12:5564-6. [DOI: 10.1021/ol102358s] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Affiliation(s)
- Kamyar Afarinkia
- Institute of Cancer Therapeutics and Analytical Center, University of Bradford, Richmond Road, Bradford BD7 1DP, United Kingdom
| | - Mohamed Haji Abdullahi
- Institute of Cancer Therapeutics and Analytical Center, University of Bradford, Richmond Road, Bradford BD7 1DP, United Kingdom
| | - Ian J. Scowen
- Institute of Cancer Therapeutics and Analytical Center, University of Bradford, Richmond Road, Bradford BD7 1DP, United Kingdom
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9
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Afarinkia K, Abdullahi MH, Scowen IJ. A new, general method for the synthesis of carbasugar-sugar pseudodisaccharides. Org Lett 2010; 11:5182-4. [PMID: 19824620 DOI: 10.1021/ol901960y] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A general synthetic methodology for the synthesis of sugar-carbasugar pseudodisaccharides is described. The methodology is based on the cycloaddition of pyran-2-ones to vinylated sugars and the subsequent manipulation of the cycloadducts to construct the carbasugar component of the pseudodisaccharide.
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Affiliation(s)
- Kamyar Afarinkia
- Institute of Cancer Therapeutics, University of Bradford, Richmond Road, Bradford, BD7 1DP, United Kingdom.
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10
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Wu W, He S, Zhou X, Lee CS. Diels-Alder Cycloadditions of 5-Hydroxy-2-pyrones: 2H-Pyran-2,5-diones and 5-(tert-Butyldimethylsilyloxy)-2-pyrones as Synthons. European J Org Chem 2010. [DOI: 10.1002/ejoc.200901040] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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11
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12
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Maeda S, Obora Y, Ishii Y. Selective Cyclodimerization and Cyclotrimerization of Acetals Bearing Electron-Withdrawing Groups Catalyzed by Lewis Acids. European J Org Chem 2009. [DOI: 10.1002/ejoc.200900432] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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13
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Jana C, Studer A. Divergente Reaktionen an Racematen: katalytische, enantioselektive und regiodivergente Nitroso-Diels-Alder-Reaktionen. Angew Chem Int Ed Engl 2007. [DOI: 10.1002/ange.200701631] [Citation(s) in RCA: 49] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Jana CK, Studer A. Divergent Reactions for Racemates: Catalytic, Enantioselective, and Regiodivergent Nitroso Diels–Alder Reactions. Angew Chem Int Ed Engl 2007; 46:6542-4. [PMID: 17654641 DOI: 10.1002/anie.200701631] [Citation(s) in RCA: 116] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Chandan Kumar Jana
- NRW Graduate School of Chemistry, Organisch-Chemisches Institut, Westfälische Wilhelms-Universität, Corrensstrasse 40, 48149 Münster, Germany
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Arjona O, Gómez AM, López JC, Plumet J. Synthesis and Conformational and Biological Aspects of Carbasugars. Chem Rev 2007; 107:1919-2036. [PMID: 17488060 DOI: 10.1021/cr0203701] [Citation(s) in RCA: 281] [Impact Index Per Article: 15.6] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Affiliation(s)
- Odón Arjona
- Departamento de Química Orgánica, Facultad de Química, Universidad Complutense, 28040 Madrid, Spain
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16
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Afarinkia K, Bahar A, Bearpark MJ, Garcia-Ramos Y, Ruggiero A, Neuss J, Vyas M. Investigation of the Diels-Alder cycloadditions of 2(H)-1,4-oxazin-2-ones. J Org Chem 2006; 70:9529-37. [PMID: 16268629 DOI: 10.1021/jo051646i] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
[Reaction: see text]. A variety of 5-chloro-2(H)-1,4-oxazin-2-ones bearing a range of substituents at their 3- and 6-positions undergo Diels-Alder cycloaddition as a 2-azadiene component with electron-rich, electron-deficient, and electron-neutral dienophiles. These reactions proceed with moderate regio- and stereoselectivity to afford relatively stable and readily isolable bridged bicyclic lactone cycloadducts. Chemical manipulation of these cycloadducts affords highly substituted and functionally rich piperidines. The regio- and stereochemical preferences of the cycloadditions of 5-chloro-2(H)-1,4-oxazin-2-ones are investigated computationally using density functional theory (B3LYP/6-31G).
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Affiliation(s)
- Kamyar Afarinkia
- Department of Chemistry, King's College, Strand, London WC2R 2LS, UK.
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Ortiz JC, Ozores L, Cagide-Fagín F, Alonso R. Annulation of β-aryl-α-nitro-α,β-enals and 2,2-dimethyl-1,3-dioxan-5-one: a one-step assembly of nitrocyclitols. Application to a short practical synthesis of (±)-7-deoxy-2-epi-pancratistatin tetraacetate. Chem Commun (Camb) 2006:4239-41. [PMID: 17031444 DOI: 10.1039/b606277f] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A novel, highly stereocontrolled formal [3 + 3] annulation of beta-aryl-alpha-nitro-alpha,beta-enals with the enamine derived from 2,2-dimethyl-1,3-dioxan-5-one and pyrrolidine afforded protected nitrocyclitols with five newly created stereocentres and constituted the key step in a short, gram-scale synthesis of a pancratistatin analogue.
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Affiliation(s)
- Juan Carlos Ortiz
- Departamento de Química Orgánica, Universidad de Santiago, 15782 Santiago de Compostela, Spain
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Novel strategies for the preparation of aminocarbasugar analogues: syntheses of N-substituted aminocyclitols from d-mannose. ACTA ACUST UNITED AC 2005. [DOI: 10.1016/j.tetasy.2005.05.033] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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Afarinkia K, Bearpark MJ, Ndibwami A. An Experimental and Computational Investigation of the Diels−Alder Cycloadditions of Halogen-Substituted 2(H)-Pyran-2-ones. J Org Chem 2005; 70:1122-33. [PMID: 15704944 DOI: 10.1021/jo048213k] [Citation(s) in RCA: 45] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
[reaction: see text] Diels-Alder reactions of 3- and 5-halo-subsituted 2(H)-pyran-2-ones with both electron-rich and electron-deficient dienophiles afford stable and readily isolable bridged bicyclic lactone cycloadducts. These cycloadditions proceed with excellent regioselectivity and very good stereoselectivity. In contrast, Diels-Alder reactions of 4-halo-subsituted 2(H)-pyran-2-ones afford cycloadducts which are very prone to loss of bridging CO(2) and the subsequent formation of barrelenes ([2.2.2]cyclooctenes). Furthermore, these cycloadditions proceed with only moderate regio- and stereoselectivity. For both series of the 3- and 5-halo-subsituted 2(H)-pyran-2-ones and 4-halo-subsituted 2(H)-pyran-2-ones, the reactivity patterns do not significantly change between the halogens. The regio- and stereochemical preferences of the cycloadditions of halo-substituted 2(H)-pyran-2-ones are investigated computationally. Calculations were carried out on the transition states leading to the four possible regio- and stereoisomeric cycloadducts by using density functional theory (B3LYP/6-31G). These studies allow prediction of the regio- and stereoselectivity in these reactions which are broadly in line with experimental observations.
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Affiliation(s)
- Kamyar Afarinkia
- Department of Chemistry, King's College, Strand, London WC2R 2LS, United Kingdom
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20
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Afarinkia K, Bahar A, Neuss J, Ruggiero A. 2( H )-1,4-Oxazin-2-ones as ambident azadienes. Tetrahedron Lett 2004. [DOI: 10.1016/j.tetlet.2004.03.183] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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21
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El Khadem HS, Fatiadi AJ. HYDRAZINE DERIVATIVES OF CARBA SUGARS AND RELATED COMPOUNDS. Adv Carbohydr Chem Biochem 2004; 59:135-73. [PMID: 15607765 DOI: 10.1016/s0065-2318(04)59004-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Affiliation(s)
- Hassan S El Khadem
- Department of Chemistry, The American University, Washington, DC 20016, USA
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22
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Afarinkia K, Bearpark MJ, Ndibwami A. Computational and experimental investigation of the Diels-Alder cycloadditions of 4-chloro-2(H)-pyran-2-one. J Org Chem 2003; 68:7158-66. [PMID: 12968865 DOI: 10.1021/jo0348827] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
4-Chloro-2(H)-pyran-2-one undergoes thermal Diels-Alder cycloaddition with electron-deficient dienophiles to afford, without any significant selectivity, 6-endo- and 5-endo-substituted bicyclic lactone cycloadducts. In contrast to 3- and 5-bromo-2(H)-pyran-2-one, 4-chloro-2(H)-pyran-2-one does not undergo thermal cycloadditions with electron-rich dienophiles. The regio- and stereochemical preferences of the cycloadditions of 4-chloro-2(H)-pyran-2-one and other related 2(H)-pyran-2-ones are investigated computationally. Calculations were carried out on the transition states leading to the four possible regio- and stereoisomeric cycloadducts using density functional theory (B3LYP/6-31G). These studies allow prediction of the regio- and stereoselectivity in these reactions which are in line with experimental observations.
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Affiliation(s)
- Kamyar Afarinkia
- Department of Chemistry, King's College, Strand, London WC2R 2LS, UK.
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23
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Advances in Chemical Synthesis of Carbasugars and Analogues. ACTA ACUST UNITED AC 2003. [DOI: 10.1016/s1572-5995(03)80013-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
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24
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A norbornyl route to cyclohexitols: structural diversity in fragmentation through functional group switching. Synthesis of α- and β-galactose, α-talose and α-fucopyranose carbasugars. Tetrahedron Lett 2000. [DOI: 10.1016/s0040-4039(00)00408-1] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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