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Stack TMM, Johnson WH, Whitman CP. Synthesis and enzymatic ketonization of the 5-(halo)-2-hydroxymuconates and 5-(halo)-2-hydroxy-2,4-pentadienoates. Beilstein J Org Chem 2017; 13:1022-1031. [PMID: 28684981 PMCID: PMC5480330 DOI: 10.3762/bjoc.13.101] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2017] [Accepted: 05/11/2017] [Indexed: 02/03/2023] Open
Abstract
5-Halo-2-hydroxymuconates and 5-halo-2-hydroxy-2,4-pentadienoates are stable dienols that are proposed intermediates in bacterial meta-fission pathways for the degradation of halogenated aromatic compounds. The presence of the halogen raises questions about how the bulk and/or electronegativity of these substrates would affect enzyme catalysis or whether some pathway enzymes have evolved to accommodate it. To address these questions, 5-halo-2-hydroxymuconates and 5-halo-2-hydroxy-2,4-pentadienoates (5-halo = Cl, Br, F) were synthesized and a preliminary analysis of their enzymatic properties carried out. In aqueous buffer, 5-halo-2-hydroxy-2,4-pentadienoates rapidly equilibrate with the β,γ-unsaturated ketones. For the 5-chloro and 5-bromo derivatives, a slower conversion to the α,β-isomers follows. There is no detectable formation of the α,β-isomer for the 5-fluoro derivative. Kinetic parameters were also obtained for both sets of compounds in the presence of 4-oxalocrotonate tautomerase (4-OT) from Pseudomonas putida mt-2 and Leptothrix cholodnii SP-6. For 5-halo-2-hydroxymuconates, there are no major differences in the kinetic parameters for the two enzymes (following the formation of the β,γ-unsaturated ketones). In contrast, the L. cholodnii SP-6 4-OT is ≈10-fold less efficient than the P. putida mt-2 4-OT in the formation of the β,γ-unsaturated ketones and the α,β-isomers from the 5-halo-2-hydroxy-2,4-pentadienoates. The implications of these findings are discussed. The availability of these compounds will facilitate future studies of the haloaromatic catabolic pathways.
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Affiliation(s)
- Tyler M M Stack
- Department of Molecular Biosciences, College of Natural Sciences, 1 University Station, University of Texas, Austin, TX 78712, USA
| | - William H Johnson
- Division of Chemical Biology and Medicinal Chemistry, College of Pharmacy, 1 University Station, University of Texas, Austin, TX 78712, USA
| | - Christian P Whitman
- Division of Chemical Biology and Medicinal Chemistry, College of Pharmacy, 1 University Station, University of Texas, Austin, TX 78712, USA
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David E, Couve-Bonnaire S, Jubault P, Pannecoucke X. Ethyl dibromofluoroacetate: a versatile reagent for the synthesis of fluorinated molecules. Tetrahedron 2013; 69:11039-11055. [PMID: 32287427 PMCID: PMC7126840 DOI: 10.1016/j.tet.2013.10.048] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2013] [Indexed: 02/01/2023]
Affiliation(s)
- Emilie David
- INSA de Rouen and Université de Rouen, CNRS, UMR 6014 & FR 3038, COBRA, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
| | - Samuel Couve-Bonnaire
- INSA de Rouen and Université de Rouen, CNRS, UMR 6014 & FR 3038, COBRA, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
| | - Philippe Jubault
- INSA de Rouen and Université de Rouen, CNRS, UMR 6014 & FR 3038, COBRA, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
| | - Xavier Pannecoucke
- INSA de Rouen and Université de Rouen, CNRS, UMR 6014 & FR 3038, COBRA, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
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Lemonnier G, Zoute L, Dupas G, Quirion JC, Jubault P. Diethylzinc-Mediated One-Step Stereoselective Synthesis of α-Fluoroacrylates from Aldehydes and Ketones. Two Different Pathways Depending on the Carbonyl Partner. J Org Chem 2009; 74:4124-31. [DOI: 10.1021/jo900422m] [Citation(s) in RCA: 36] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- G. Lemonnier
- INSA de Rouen et Université de Rouen, CNRS UMR 6014 C.O.B.R.A & FR 3038, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
| | - L. Zoute
- INSA de Rouen et Université de Rouen, CNRS UMR 6014 C.O.B.R.A & FR 3038, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
| | - G. Dupas
- INSA de Rouen et Université de Rouen, CNRS UMR 6014 C.O.B.R.A & FR 3038, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
| | - J.-C. Quirion
- INSA de Rouen et Université de Rouen, CNRS UMR 6014 C.O.B.R.A & FR 3038, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
| | - P. Jubault
- INSA de Rouen et Université de Rouen, CNRS UMR 6014 C.O.B.R.A & FR 3038, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
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Nikolova GS, Zhang L, Chen X, Chi L, Haufe G. Selective synthesis and self-organization at the air/water interface of long chain fluorinated unsaturated ethyl esters and alcohols. Colloids Surf A Physicochem Eng Asp 2008. [DOI: 10.1016/j.colsurfa.2007.11.013] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Guan T, Takemura K, Senboku H, Yoshida M, Hara S. An efficient synthesis of fluorocyclopentenes using fluoroalkylidenecarbenes. Tetrahedron Lett 2008. [DOI: 10.1016/j.tetlet.2007.11.019] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Raghavanpillai A, Burton DJ. An efficient stereoselective preparation of cis-perfluoroalkenylzinc reagents [(E)-RFCFCFZnCl] by the metallation of 1H,1H-perfluoroalkanes and their derivatization to cis-1-arylperfluoroalkenes [(Z)-RFCFCFAr]. J Fluor Chem 2006. [DOI: 10.1016/j.jfluchem.2005.12.022] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Xu J, Burton DJ. Highly Stereoselective Synthesis of (E)- and (Z)-α-Fluoro-α,β-unsaturated Esters and (E)- and (Z)-α-Fluoro-α,β-unsaturated Amides from 1-Bromo-1-fluoroalkenes via Palladium-Catalyzed Carbonylation Reactions. J Org Chem 2005; 70:4346-53. [PMID: 15903310 DOI: 10.1021/jo050314a] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The highly stereoselective synthesis of (E)- and (Z)-alpha-fluoro-alpha,beta-unsaturated esters and (E)- and (Z)-alpha-fluoro-alpha,beta-unsaturated amides is described. 1-Bromo-1-fluoroalkenes (E/Z approximately 1:1), which are readily available starting materials, have been found to isomerize to high E/Z ratios after storage at -20 degrees C for 1 week or by photolysis at 254 nm. Since the (E)-isomers have been found to react faster than the corresponding (Z)-isomers at room temperature in Pd(0)-catalyzed reactions, the palladium-catalyzed carboalkoxylation of high E/Z 1-bromo-1-fluoroalkenes lead to a high Z/E (Z/E >/= 98:2) ratio of the alpha-fluoro-alpha,beta-unsaturated esters. When 1-bromo-1-fluoroalkenes (E/Z approximately 1:1) were reacted with HCOOH/NBu(3)/Pd(II)/DMF, the (E)-isomer was selectively reduced, and the remaining (Z)-1-bromo-1-fluoroalkenes were recovered in essentially pure isomeric form. The resulting mixture of (Z)-1-bromo-1-fluoroalkenes and the reduced products underwent similar palladium-catalyzed carboalkoxylation reactions at 70 degrees C, and the (E)-alpha-fluoro-alpha,beta-unsaturated esters were stereospecifically obtained. This methodology was also successfully applied for the stereospecific synthesis of (Z)- and (E)-alpha-fluoro-alpha,beta-unsaturated amides: the palladium-catalyzed carboamidation reaction of high E/Z and (Z)-1-bromo-1-fluoroalkenes lead to pure (Z)- and (E)-alpha-fluoro-alpha,beta-unsaturated amides, respectively.
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Affiliation(s)
- Jianjun Xu
- Department of Chemistry, University of Iowa, Iowa City, IA 52242, USA
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Xu J, Burton DJ. Kinetic Separation Methodology for the Stereoselective Synthesis of (E)- and (Z)-α-Fluoro-α,β-unsaturated Esters via the Palladium-Catalyzed Carboalkoxylation of 1-Bromo-1-fluoroalkenes. Org Lett 2002. [DOI: 10.1021/ol025506w] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Jianjun Xu
- Department of Chemistry, University of Iowa, Iowa City, Iowa 52242
| | - Donald J. Burton
- Department of Chemistry, University of Iowa, Iowa City, Iowa 52242
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Gustafsson M, Kärkönen A, Simola LK, Teeri TH, Sipilä J, Kilpeläinen I, Brunow G. beta-fluoro-coniferyl alcohol does not inhibit lignin biosynthesis in suspension cultures of Picea abies (L.) Karst. PHYTOCHEMISTRY 2001; 58:243-248. [PMID: 11551546 DOI: 10.1016/s0031-9422(01)00251-5] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
A fluorinated analogue of coniferyl alcohol has been reported to be a specific inhibitor of oxidases involved in the biosynthesis of lignin. The Z isomer of beta-fluoro-coniferyl alcohol was synthesized and used for the preparation of dehydrogenation polymers (DHPs) and was also tested on lignin producing suspension cultures of spruce (Picea abies (L.) Karst.). The growth of the cells or the production of lignin by the suspension cultures was not significantly affected by the addition of fluoroconiferyl alcohol. This analogue did not form polymers quite as easily as did coniferyl alcohol in oxidation with hydrogen peroxide and horseradish peroxidase. In both cases the beta-fluoroconiferyl alcohol became incorporated in the polymeric product. We were unable to detect any specific inhibition of peroxidase activity, which is at variance with earlier reports of pronounced inhibition of lignin biosynthesis in poplar plantlets by fluoroconiferin, a potential inhibitor of oxidases involved in lignin biosynthesis.
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Affiliation(s)
- M Gustafsson
- Laboratory of Organic Chemistry, Department of Chemistry, University of Helsinki, PO Box 56, FIN-00014, Helsinki, Finland
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Komatsu Y, Sakamoto T, Kitazume T. Synthetic Applications of the Carbanion with a Fluoroalkyl Group Generated by Palladium(0) Catalyst under Neutral Conditions. J Org Chem 1999; 64:8369-8374. [PMID: 11674760 DOI: 10.1021/jo990463r] [Citation(s) in RCA: 43] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The generation and synthetic application of stable carbanions situated in the beta position from fluorine atom(s) are described. Palladium(0)-catalyzed allylation reactions under neutral conditions proceeded smoothly in the system where a methylene group is activated by fluoroalkyl and carbonyl groups. In the above systems, the 2,2,2-trifluoroethyl moiety has been introduced onto the allylic position without the release of fluoride. Further, palladium(0)-catalyzed heterocyclization was achieved from the reaction of vinyl epoxide with 2-(trifluoromethyl)acrylate and/or 2,3,3,3-tetrafluoropropionate.
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Affiliation(s)
- Yuzo Komatsu
- Department of Bioengineering, Tokyo Institute of Technology, Nagatsuta, Midori-ku, Yokohama 226-8501, Japan
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Stereoselective synthesis of (E)-β-fluoro-α,β-unsaturated esters by carbonylation of (E)-2-fluoro-1-iodo-1-alkenyliodonium salts. Tetrahedron Lett 1999. [DOI: 10.1016/s0040-4039(99)01626-3] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Kawasaki T, Ichige T, Kitazume T. An Efficient Stereoselective Synthesis of Fluorinated Trisubstituted Alkenes. J Org Chem 1998; 63:7525-7528. [PMID: 11672408 DOI: 10.1021/jo9807159] [Citation(s) in RCA: 23] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Tomoko Kawasaki
- Department of Bioengineering, Tokyo Institute of Technology, Nagatsuta, Midori-ku, Yokohama 226-8501, Japan
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A novel reaction of β,β′-dihydroxy acids or esters with vanadium(V) trichloride oxide. New entry to the stereoselective synthesis of α-fluoro-α,β-unsaturated acids and esters. Tetrahedron Lett 1998. [DOI: 10.1016/s0040-4039(98)00949-6] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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15
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Andrés DF, Dietrich U, Laurent EG, Marquet BS. Anodic fluorination of vinyl sulfides-synthesis of α-fluoro-β-thio-α,β-unsaturated carbonyl compounds. Tetrahedron 1997. [DOI: 10.1016/s0040-4020(96)00997-0] [Citation(s) in RCA: 34] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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16
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Lucet-Levannier K, Lellouche JP, Mioskowski C, Schneider F, Cassagne C. The hydrogenation of β-hydroxy-γ-fluoro-γ-ethylenic esters as an efficient approach to the fluorohydrin substructure. Tetrahedron Lett 1996. [DOI: 10.1016/0040-4039(96)00174-8] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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17
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Funabiki K, Ohtsuki T, Ishihara T, Yamanaka H. Fluoride Ion-Promoted Reaction of Polyfluoro-1-propenylp-Toluenesulfonate with Amines. Highly Efficient and General Access to (Z)-α-Fluoro-β-amino Acrylaldehydes. CHEM LETT 1994. [DOI: 10.1246/cl.1994.1075] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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