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Makarov K, Saha S, Ghatak T, Fridman N, Eisen MS. Remodeling of N-Heterocyclic Iminato Ligand Frameworks for the Facile Synthesis of Isoureas from Alcohols and Carbodiimides Promoted by Organoactinide (Th, U) Complexes. ACS OMEGA 2021; 6:14692-14700. [PMID: 34124491 PMCID: PMC8190913 DOI: 10.1021/acsomega.1c01836] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/08/2021] [Accepted: 05/17/2021] [Indexed: 06/12/2023]
Abstract
A new class of actinide complexes [(L)An(N{SiMe3}2)3] (An = Th or U) (Th1-Th3 and U1-U3) supported by highly nucleophilic seven-membered N-heterocyclic iminato ligands were synthesized and fully characterized by single-crystal X-ray diffraction. These complexes were successfully exploited as powerful catalysts for the addition of alcohols to carbodiimides to yield the corresponding desirable isourea products at room temperature with short reaction times and excellent yields. Thorough stoichiometric, thermodynamic, and kinetic studies were carried out, allowing us to propose a plausible mechanism for the catalytic reaction.
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Tateda N, Ajisaka K, Ishiguro M, Miyazaki T. Synthesis of 5a,5a'-dicarba-d-glucobioses from conformationally restricted carbaglucosyl triflates using S N2-type inversion with carbaglucosyl nucleophiles. Bioorg Med Chem 2019; 27:2345-2367. [PMID: 30606671 DOI: 10.1016/j.bmc.2018.12.027] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2018] [Revised: 12/15/2018] [Accepted: 12/18/2018] [Indexed: 11/16/2022]
Abstract
Novel carbohydrate mimics were designed which contain two 5a-carba-d-glucose residues, one each at reducing and nonreducing end, and thus these mimics are 5a,5a'-dicarba-d-glucobioses. Dicarbadisaccharides have attractive features such as stability against endogenous degradative enzymes and being resistant to glycation reactions such as the Maillard reaction. For the synthesis of dicarba-β-d-isomaltose derivatives, the carbaglucosyl triflate locked in 4C1 conformation was synthesized by protecting with butane-2,3-diacetal group or benzylidene group. Then, 5a,5a'-dicarba-β-d-maltose and 5a,5a'-dicarba-α,β-d-trehalose were synthesized by the SN2-type inversion reaction using 4,6-O-benzylidene carbaglucosyl triflate with 4-OH and 1-OH carba-β-d-glucose derivatives, respectively, and similarly 5a,5a'-dicarba-α-d-isomaltose with 6-OH carba-α-d-glucose derivative.
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Affiliation(s)
- Naoya Tateda
- Department of Applied Life Sciences, Graduate School of Niigata University of Pharmacy and Applied Life Sciences, 265-1 Higashijima, Akiha-ku, Niigata 956-8603, Japan
| | - Katsumi Ajisaka
- Department of Applied Life Sciences, Graduate School of Niigata University of Pharmacy and Applied Life Sciences, 265-1 Higashijima, Akiha-ku, Niigata 956-8603, Japan
| | - Masaji Ishiguro
- Department of Applied Life Sciences, Graduate School of Niigata University of Pharmacy and Applied Life Sciences, 265-1 Higashijima, Akiha-ku, Niigata 956-8603, Japan.
| | - Tatsuo Miyazaki
- Department of Applied Life Sciences, Graduate School of Niigata University of Pharmacy and Applied Life Sciences, 265-1 Higashijima, Akiha-ku, Niigata 956-8603, Japan.
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Coyle T, Wu L, Debowski AW, Davies GJ, Stubbs KA. Synthetic and Crystallographic Insight into Exploiting sp 2 Hybridization in the Development of α-l-Fucosidase Inhibitors. Chembiochem 2019; 20:1365-1368. [PMID: 30663832 PMCID: PMC6589914 DOI: 10.1002/cbic.201800710] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2018] [Revised: 01/20/2019] [Indexed: 11/25/2022]
Abstract
The sugar fucose plays a myriad of roles in biological recognition. Enzymes hydrolyzing fucose from glycoconjugates, α-l-fucosidases, are important targets for inhibitor and probe development. Here we describe the synthesis and evaluation of novel α-l-fucosidase inhibitors, with X-ray crystallographic analysis using an α-l-fucosidase from Bacteroides thetaiotamicron helping to lay a foundation for future development of inhibitors for this important enzyme class.
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Affiliation(s)
- Travis Coyle
- School of Molecular SciencesUniversity of Western Australia35 Stirling HighwayCrawleyWA6009Australia
- Present address: School of ChemistryUniversity College DublinStillorgan RoadBelfield, Dublin4Ireland
| | - Liang Wu
- Department of Chemistry, York Structural LaboratoryUniversity of YorkHeslingtonYorkYO10 5DDUK
| | - Aleksandra W. Debowski
- School of Molecular SciencesUniversity of Western Australia35 Stirling HighwayCrawleyWA6009Australia
| | - Gideon J. Davies
- Department of Chemistry, York Structural LaboratoryUniversity of YorkHeslingtonYorkYO10 5DDUK
| | - Keith A. Stubbs
- School of Molecular SciencesUniversity of Western Australia35 Stirling HighwayCrawleyWA6009Australia
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Bu XB, Zhang ZX, Peng QQ, Xu X, Zhao YL. Rhodium-Catalyzed Tandem Reaction of Isocyanides with Azides and Oxygen Nucleophiles: Synthesis of Isoureas. J Org Chem 2019; 84:53-59. [PMID: 30566353 DOI: 10.1021/acs.joc.8b01842] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A novel rhodium-catalyzed tandem reaction of isocyanides with azides and various oxygen nucleophiles has been developed. The reaction provides a simple and highly efficient one-pot synthesis of various N-sulfonyl/acylisoureas with broad substrate scope in an atom-economical manner from readily available starting materials in a highly stereoselective manner.
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Affiliation(s)
- Xiu-Bin Bu
- Jilin Province Key Laboratory of Organic Functional Molecular Design & Synthesis, Faculty of Chemistry , Northeast Normal University , Changchun 130024 , China
| | - Zhi-Xin Zhang
- Jilin Province Key Laboratory of Organic Functional Molecular Design & Synthesis, Faculty of Chemistry , Northeast Normal University , Changchun 130024 , China
| | - Qin-Qin Peng
- Jilin Province Key Laboratory of Organic Functional Molecular Design & Synthesis, Faculty of Chemistry , Northeast Normal University , Changchun 130024 , China
| | - Xianxiu Xu
- College of Chemistry, Chemical Engineering and Materials Science, Collaborative Innovation Center of Functionalized Probes for Chemical Imaging in Universities of Shandong, Key Laboratory of Molecular and Nano Probes, Ministry of Education, Institute of Molecular and Nano Science , Shandong Normal University , Jinan 250014 , China
| | - Yu-Long Zhao
- Jilin Province Key Laboratory of Organic Functional Molecular Design & Synthesis, Faculty of Chemistry , Northeast Normal University , Changchun 130024 , China
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N-Alkyl-1,5-dideoxy-1,5-imino-l-fucitols as fucosidase inhibitors: Synthesis, molecular modelling and activity against cancer cell lines. Bioorg Chem 2018; 84:418-433. [PMID: 30554081 DOI: 10.1016/j.bioorg.2018.12.003] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2018] [Revised: 11/23/2018] [Accepted: 12/03/2018] [Indexed: 12/22/2022]
Abstract
1,5-Dideoxy-1,5-imino-l-fucitol (1-deoxyfuconojirimycin, DFJ) is an iminosugar that inhibits fucosidases. Herein, N-alkyl DFJs have been synthesised and tested against the α-fucosidases of T. maritima (bacterial origin) and B. taurus (bovine origin). The N-alkyl derivatives were inactive against the bacterial fucosidase, while inhibiting the bovine enzyme. Docking of inhibitors to homology models, generated for the bovine and human fucosidases, was carried out. N-Decyl-DFJ was toxic to cancer cell lines and was more potent than the other N-alkyl DFJs studied.
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Abstract
The first synthesis of carbasugars, compounds in which the ring oxygen of a monosaccharide had been replaced by a methylene moiety, was described in 1966 by Professor G. E. McCasland’s group. Seven years later, the first true natural carbasugar (5a-carba-R-D-galactopyranose) was isolated from a fermentation broth of Streptomyces sp. MA-4145. In the following decades, the chemistry and biology of carbasugars have been extensively studied. Most of these compounds show interesting biological properties, especially enzymatic inhibitory activities, and, in consequence, an important number of analogues have also been prepared in the search for improved biological activities. The aim of this review is to give coverage on the progress made in two important aspects of these compounds: the elucidation of their biosynthesis and the consideration of their biological properties, including the extensively studied carbapyranoses as well as the much less studied carbafuranoses.
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Trapero A, Alfonso I, Butters TD, Llebaria A. Polyhydroxylated Bicyclic Isoureas and Guanidines Are Potent Glucocerebrosidase Inhibitors and Nanomolar Enzyme Activity Enhancers in Gaucher Cells. J Am Chem Soc 2011; 133:5474-84. [DOI: 10.1021/ja111480z] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Affiliation(s)
- Ana Trapero
- Research Unit on Bioactive Molecules (RUBAM), Departament de Química Biomèdica, Institut de Química Avançada de Catalunya (IQAC−CSIC), Jordi Girona 18-26, 08034 Barcelona, Spain
| | - Ignacio Alfonso
- Departament de Química Biològica y Modelització Molecular, IQAC−CSIC, Jordi Girona 18-26, 08034, Barcelona, Spain
| | - Terry D. Butters
- Oxford Glycobiology Institute, Department of Biochemistry, University of Oxford, South Parks Road, Oxford OX1 3QU, United Kingdom
| | - Amadeu Llebaria
- Research Unit on Bioactive Molecules (RUBAM), Departament de Química Biomèdica, Institut de Química Avançada de Catalunya (IQAC−CSIC), Jordi Girona 18-26, 08034 Barcelona, Spain
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Affiliation(s)
- Antonio Delgado
- Research Unit on BioActive Molecules (RUBAM), Departament de Química Orgànica Biològica, Institut d'Investigacions Químiques i Ambientals de Barcelona (IIQAB–C.S.I.C), Jordi Girona 18–26, 08034 Barcelona, Spain
- Universitat de Barcelona, Facultat de Farmàcia, Unitat de Química Farmacèutica (Unitat Associada al CSIC), Avgda. Juan XXIII, s/n, 08028 Barcelona, Spain
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Arjona O, Gómez AM, López JC, Plumet J. Synthesis and Conformational and Biological Aspects of Carbasugars. Chem Rev 2007; 107:1919-2036. [PMID: 17488060 DOI: 10.1021/cr0203701] [Citation(s) in RCA: 281] [Impact Index Per Article: 15.6] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Affiliation(s)
- Odón Arjona
- Departamento de Química Orgánica, Facultad de Química, Universidad Complutense, 28040 Madrid, Spain
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Ogawa S, Asada M, Ooki Y, Mori M, Itoh M, Korenaga T. Preparation of Versatile Synthetic Precursors of Optically Active 5a‐Carba‐sugars from (−)‐vibo‐Quercitol. J Carbohydr Chem 2006. [DOI: 10.1081/car-200064653] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Affiliation(s)
- Seiichiro Ogawa
- a Department of Biosciences and Informatics, Faculty of Science and Technology , Keio University , Hiyoshi, Kohoku‐ku, Yokohama, Japan
| | - Miwako Asada
- a Department of Biosciences and Informatics, Faculty of Science and Technology , Keio University , Hiyoshi, Kohoku‐ku, Yokohama, Japan
| | - Yoriko Ooki
- b Department of Chemistry , Tokyo Metropolitan University , Minami‐Ohsawa, Hachioji, Tokyo, Japan
| | - Midori Mori
- b Department of Chemistry , Tokyo Metropolitan University , Minami‐Ohsawa, Hachioji, Tokyo, Japan
| | - Masayoshi Itoh
- b Department of Chemistry , Tokyo Metropolitan University , Minami‐Ohsawa, Hachioji, Tokyo, Japan
| | - Takashi Korenaga
- b Department of Chemistry , Tokyo Metropolitan University , Minami‐Ohsawa, Hachioji, Tokyo, Japan
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Laroche C, Behr JB, Szymoniak J, Bertus P, Schütz C, Vogel P, Plantier-Royon R. Spirocyclopropyl pyrrolidines as a new series of α-l-fucosidase inhibitors. Bioorg Med Chem 2006; 14:4047-54. [PMID: 16488612 DOI: 10.1016/j.bmc.2006.02.005] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2005] [Revised: 01/24/2006] [Accepted: 02/03/2006] [Indexed: 11/16/2022]
Abstract
Polyhydroxy 4-azaspiro[2.4]heptane derivatives (spirocyclopropyl iminosugars) were prepared in four to six steps from readily available protected aldoses. The key step of the reaction sequence involves a titanium-mediated aminocyclopropanation of glycononitriles with subsequent cyclization. Five new polyhydroxypyrrolidines so-obtained have been evaluated for their ability to inhibit 16 glycosidases. One of them exhibits selective inhibition of alpha-L-fucosidase from bovine kidney (Ki=1.6 microM, competitive).
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Affiliation(s)
- Christophe Laroche
- Laboratoire Réactions Sélectives et Applications, Université de Reims Champagne-Ardenne, UMR URCA/CNRS 6519, UFR Sciences, BP 1039, F-51687 Reims Cedex 2, France
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Ogawa S, Funayama S, Okazaki K, Ishizuka F, Sakata Y, Doi F. Synthesis of 5a-carba-hexopyranoses and hexopyranosylamines, as well as 5a,5a′-dicarbadisaccharides, from 3,8-dioxatricyclo[4.2.1.02,4]nonan-9-ol: glycosidase inhibitory activity of N-substituted 5a-carba-β-gluco- and β-galactopyranosylamines, and derivatives thereof. Bioorg Med Chem Lett 2004; 14:5183-8. [PMID: 15380224 DOI: 10.1016/j.bmcl.2004.07.091] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2004] [Accepted: 07/26/2004] [Indexed: 11/22/2022]
Abstract
Since glycosidase and glycosyltransferase inhibitors, composed of carba-sugars, have recently attracted much attention, it is desirable to develop effective preparative routes for provision of new carba-sugar derivatives of potential biological interest. 1,2:3,6-Dianhydro-5a-carba-alpha-glucopyranose was here chosen for study of synthetic utility, and demonstrated to be a promising intermediate for supplying several carba-beta-glycosylamines and N-linked dicarba-oligosaccharides. An N-linked 5a,5a'-dicarbalactose derivative obtained here was found to be a strong alpha-galactosidase inhibitor (IC50 1.2 microM, green coffee beans).
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Affiliation(s)
- Seiichiro Ogawa
- Department of Biosciences and Informatics, Faculty of Science and Technology, Keio University, Hiyoshi, Kohoku-ku, Yokohama 223-8522, Japan.
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Ogawa S, Fujieda S, Sakata Y, Ishizaki M, Hisamatsu S, Okazaki K. Synthesis and glycosidase inhibitory activity of some N -Substituted 6-Deoxy-5a-carba-β- dl - and l -galactopyranosylamines. Bioorg Med Chem Lett 2003; 13:3461-3. [PMID: 14505649 DOI: 10.1016/s0960-894x(03)00742-x] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
Chemical modification of 5a-carba-beta-DL-fucopyranosylamine (3) generated six N-substituted derivatives 9a-f, among which N-octyl 9b, decyl 9c, and phenylbutyl ones 9f were found to be very strong beta-galactosidase as well as beta-glucosidase inhibitors. The inhibitory activity appeared attributable to D-enantiomers from biological assays of prepared L-enantiomers. Therefore, 6-deoxy-5a-carba-beta-D-galactopyranosylamine (D-3) might be a promising lead compound for further design of new carba sugar-type beta-galactosidase inhibitors.
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Affiliation(s)
- Seiichiro Ogawa
- Department of Biosciences and Informatics, Faculty of Science and Technology, Keio University, Hiyoshi, Kohoku-ku, Yokohama 223-8522, Japan.
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