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Becht A, Schollmayer C, Holzgrabe U. Fingerprint spectra for drug formulations using a DOSY filter: Pros and cons. J Pharm Biomed Anal 2022; 214:114723. [DOI: 10.1016/j.jpba.2022.114723] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2022] [Revised: 03/09/2022] [Accepted: 03/10/2022] [Indexed: 11/16/2022]
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2
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Arrabal-Campos FM, Aguilera-Sáez LM, Fernández I. Algebraic Reconstruction Technique for Diffusion NMR Experiments. Application to the Molecular Weight Prediction of Polymers. J Phys Chem A 2019; 123:943-950. [DOI: 10.1021/acs.jpca.8b08584] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Francisco M. Arrabal-Campos
- Department of Chemistry and Physics, Research Centre CIAIMBITAL, Universidad de Almería, Ctra. Sacramento, s/n, Almería, E-04120, Spain
| | - Luis M. Aguilera-Sáez
- Department of Chemistry and Physics, Research Centre CIAIMBITAL, Universidad de Almería, Ctra. Sacramento, s/n, Almería, E-04120, Spain
| | - Ignacio Fernández
- Department of Chemistry and Physics, Research Centre CIAIMBITAL, Universidad de Almería, Ctra. Sacramento, s/n, Almería, E-04120, Spain
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3
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Reci A, Ainte MI, Sederman AJ, Mantle MD, Gladden LF. Optimising sampling patterns for bi-exponentially decaying signals. Magn Reson Imaging 2018; 56:14-18. [PMID: 30413334 DOI: 10.1016/j.mri.2018.09.029] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2018] [Revised: 09/25/2018] [Accepted: 09/26/2018] [Indexed: 11/29/2022]
Abstract
A recently reported method, based on the Cramér-Rao Lower Bound theory, for optimising sampling patterns for a wide range of nuclear magnetic resonance (NMR) experiments is applied to the problem of optimising sampling patterns for bi-exponentially decaying signals. Sampling patterns are optimised by minimizing the percentage error in estimating the most difficult to estimate parameter of the bi-exponential model, termed the objective function. The predictions of the method are demonstrated in application to pulsed field gradient NMR data recorded for the two-component diffusion of a binary mixture of methane/ethane in a zeolite. It is shown that the proposed method identifies an optimal sampling pattern with the predicted objective function being within 10% of that calculated from the experiment dataset. The method is used to advise on the number of sampled points and the noise level needed to resolve two-component systems characterised by a range of ratios of populations and diffusion coefficients. It is subsequently illustrated how the method can be used to reduce the experiment acquisition time while still being able to resolve a given two-component system.
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Affiliation(s)
- A Reci
- Department of Chemical Engineering and Biotechnology, University of Cambridge, Philippa Fawcett Drive, Cambridge CB3 0AS, United Kingdom
| | - M I Ainte
- Department of Chemical Engineering and Biotechnology, University of Cambridge, Philippa Fawcett Drive, Cambridge CB3 0AS, United Kingdom
| | - A J Sederman
- Department of Chemical Engineering and Biotechnology, University of Cambridge, Philippa Fawcett Drive, Cambridge CB3 0AS, United Kingdom.
| | - M D Mantle
- Department of Chemical Engineering and Biotechnology, University of Cambridge, Philippa Fawcett Drive, Cambridge CB3 0AS, United Kingdom
| | - L F Gladden
- Department of Chemical Engineering and Biotechnology, University of Cambridge, Philippa Fawcett Drive, Cambridge CB3 0AS, United Kingdom
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4
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Assemat G, Gouilleux B, Bouillaud D, Farjon J, Gilard V, Giraudeau P, Malet-Martino M. Diffusion-ordered spectroscopy on a benchtop spectrometer for drug analysis. J Pharm Biomed Anal 2018; 160:268-275. [DOI: 10.1016/j.jpba.2018.08.011] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2018] [Revised: 07/27/2018] [Accepted: 08/05/2018] [Indexed: 12/18/2022]
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5
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Reci A, Sederman AJ, Gladden LF. Optimising magnetic resonance sampling patterns for parametric characterisation. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2018; 294:35-43. [PMID: 30005192 DOI: 10.1016/j.jmr.2018.06.010] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2018] [Revised: 05/29/2018] [Accepted: 06/18/2018] [Indexed: 06/08/2023]
Abstract
Sampling strategies are often central to experimental design. Choosing efficiently which data to acquire can improve the estimation of parameters and reduce the acquisition time. This work is focused on designing optimal sampling patterns for Nuclear Magnetic Resonance (NMR) applications, illustrated with respect to the best estimate of the parameters characterising a lognormal distribution. Lognormal distributions are commonly used as fitting models for distributions of spin-lattice relaxation time constants, spin-spin relaxation time constants and diffusion coefficients. A method for optimising the choice of points to be sampled is presented which is based on the Cramér-Rao Lower Bound (CRLB) theory. The method's capabilities are demonstrated experimentally by applying it to the problem of estimating the emulsion droplet size distribution from a pulsed field gradient (PFG) NMR diffusion experiment. A difference of <5% is observed between the predictions of CRLB theory and the PFG NMR experimental results. It is shown that CLRB theory is stable down to signal-to-noise ratios of ∼10. A sensitivity analysis for the CRLB theory is also performed. The method of optimizing sampling patterns is easily adapted to distributions other than lognormal and to other aspects of experimental design; case studies of optimising the sampling scheme for a fixed acquisition time and determining the potential for reduction in acquisition time for a fixed parameter estimation accuracy are presented. The experimental acquisition time is typically reduced by a factor of 3 using the proposed method compared to a constant gradient increment approach that would usually be used.
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Affiliation(s)
- A Reci
- Department of Chemical Engineering and Biotechnology, University of Cambridge, Philippa Fawcett Drive, Cambridge CB3 0AS, United Kingdom
| | - A J Sederman
- Department of Chemical Engineering and Biotechnology, University of Cambridge, Philippa Fawcett Drive, Cambridge CB3 0AS, United Kingdom.
| | - L F Gladden
- Department of Chemical Engineering and Biotechnology, University of Cambridge, Philippa Fawcett Drive, Cambridge CB3 0AS, United Kingdom
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6
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NMR diffusometry data sampling optimization for mixture analysis. J Pharm Biomed Anal 2018; 148:156-162. [DOI: 10.1016/j.jpba.2017.09.028] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2017] [Revised: 09/19/2017] [Accepted: 09/22/2017] [Indexed: 11/18/2022]
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7
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Reile I, Aspers RLEG, Tyburn JM, Kempf JG, Feiters MC, Rutjes FPJT, Tessari M. DOSY Analysis of Micromolar Analytes: Resolving Dilute Mixtures by SABRE Hyperpolarization. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201703577] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Indrek Reile
- Institute for Molecules and Materials; Radboud University; Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
| | - Ruud L. E. G. Aspers
- Institute for Molecules and Materials; Radboud University; Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
| | | | | | - Martin C. Feiters
- Institute for Molecules and Materials; Radboud University; Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
| | - Floris P. J. T. Rutjes
- Institute for Molecules and Materials; Radboud University; Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
| | - Marco Tessari
- Institute for Molecules and Materials; Radboud University; Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
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8
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Reile I, Aspers RLEG, Tyburn JM, Kempf JG, Feiters MC, Rutjes FPJT, Tessari M. DOSY Analysis of Micromolar Analytes: Resolving Dilute Mixtures by SABRE Hyperpolarization. Angew Chem Int Ed Engl 2017; 56:9174-9177. [DOI: 10.1002/anie.201703577] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2017] [Revised: 05/25/2017] [Indexed: 11/06/2022]
Affiliation(s)
- Indrek Reile
- Institute for Molecules and Materials; Radboud University; Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
| | - Ruud L. E. G. Aspers
- Institute for Molecules and Materials; Radboud University; Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
| | | | | | - Martin C. Feiters
- Institute for Molecules and Materials; Radboud University; Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
| | - Floris P. J. T. Rutjes
- Institute for Molecules and Materials; Radboud University; Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
| | - Marco Tessari
- Institute for Molecules and Materials; Radboud University; Heyendaalseweg 135 6525AJ Nijmegen The Netherlands
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Yuan B, Ding Y, Kamal GM, Shao L, Zhou Z, Jiang B, Sun P, Zhang X, Liu M. Reconstructing diffusion ordered NMR spectroscopy by simultaneous inversion of Laplace transform. JOURNAL OF MAGNETIC RESONANCE (SAN DIEGO, CALIF. : 1997) 2017; 278:1-7. [PMID: 28301804 DOI: 10.1016/j.jmr.2017.03.004] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/24/2016] [Revised: 03/04/2017] [Accepted: 03/06/2017] [Indexed: 06/06/2023]
Abstract
2D diffusion-ordered NMR spectroscopy (DOSY) has been widely recognized as a powerful tool for analyzing mixtures and probing inter-molecular interactions in situ. But it is difficult to differentiate molecules with similar diffusion coefficients in presence of overlapped spectra. Its performance is susceptible to the number of chemical components, and usually gets worse when the number of components increases. Here, to alleviate the problem, numerical simultaneous inversion of Laplace transform (SILT) of many related variables is proposed for reconstructing DOSY spectrum (SILT-DOSY). The advantage of the proposed method in comparison to other methods is that it is capable of estimating the number of analytes more accurately and deriving corresponding component spectra, which in turn leads to the more reliable identification of the components.
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Affiliation(s)
- Bin Yuan
- Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Centre for Magnetic Resonance, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China; University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Yiming Ding
- Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Centre for Magnetic Resonance, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China.
| | - Ghulam M Kamal
- Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Centre for Magnetic Resonance, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China; University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Limin Shao
- Department of Chemistry, University of Science and Technology of China, Hefei, Anhui 230026, China.
| | - Zhiming Zhou
- Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Centre for Magnetic Resonance, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China.
| | - Bin Jiang
- Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Centre for Magnetic Resonance, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China.
| | - Peng Sun
- Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Centre for Magnetic Resonance, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China.
| | - Xu Zhang
- Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Centre for Magnetic Resonance, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China.
| | - Maili Liu
- Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Centre for Magnetic Resonance, Wuhan Institute of Physics and Mathematics, Chinese Academy of Sciences, Wuhan 430071, China.
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10
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Chaouat C, Balayssac S, Malet-Martino M, Belaubre F, Questel E, Schmitt AM, Poigny S, Franceschi S, Perez E. Green microparticles based on a chitosan/lactobionic acid/linoleic acid association. Characterisation and evaluation as a new carrier system for cosmetics. J Microencapsul 2017; 34:162-170. [DOI: 10.1080/02652048.2017.1311956] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Affiliation(s)
- C. Chaouat
- Laboratoire des IMRCP, Université Paul Sabatier, Toulouse, France
| | - S. Balayssac
- Laboratoire SPCMIB, Université Paul Sabatier, Toulouse, France
| | | | - F. Belaubre
- Laboratoire Pierre Fabre Dermo-Cosmétique, Toulouse, France
| | - E. Questel
- Laboratoire Pierre Fabre Dermo-Cosmétique, Toulouse, France
| | - A. M. Schmitt
- Laboratoire Pierre Fabre Dermo-Cosmétique, Toulouse, France
| | - S. Poigny
- Laboratoire Pierre Fabre Dermo-Cosmétique, Toulouse, France
| | - S. Franceschi
- Laboratoire des IMRCP, Université Paul Sabatier, Toulouse, France
| | - E. Perez
- Laboratoire des IMRCP, Université Paul Sabatier, Toulouse, France
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11
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Pagès G, Gilard V, Martino R, Malet-Martino M. Pulsed-field gradient nuclear magnetic resonance measurements (PFG NMR) for diffusion ordered spectroscopy (DOSY) mapping. Analyst 2017; 142:3771-3796. [DOI: 10.1039/c7an01031a] [Citation(s) in RCA: 74] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The advent of Diffusion Ordered SpectroscopY (DOSY) NMR has enabled diffusion coefficients to be routinely measured and used to characterize chemical systems in solution. Indeed, DOSY NMR allows the separation of the chemical entities present in multicomponent systems and provides information on their intermolecular interactions as well as on their size and shape.
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Affiliation(s)
- G. Pagès
- INRA
- AgroResonance – UR370 Qualité des Produits Animaux
- Saint Genès Champanelle
- France
| | - V. Gilard
- Groupe de RMN Biomédicale
- Laboratoire de Synthèse et Physicochimie de Molécules d'Intérêt Biologique
- UMR CNRS 5068
- Université de Toulouse
- 31062 Toulouse cedex 9
| | - R. Martino
- Groupe de RMN Biomédicale
- Laboratoire de Synthèse et Physicochimie de Molécules d'Intérêt Biologique
- UMR CNRS 5068
- Université de Toulouse
- 31062 Toulouse cedex 9
| | - M. Malet-Martino
- Groupe de RMN Biomédicale
- Laboratoire de Synthèse et Physicochimie de Molécules d'Intérêt Biologique
- UMR CNRS 5068
- Université de Toulouse
- 31062 Toulouse cedex 9
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