DNA-Capped Silver Nanoflakes as Fluorescent Nanosensor for Highly Sensitive Imaging of Endogenous H2S in Cell Division Cycles

Multifaceted Applications of DNA-Capped Silver Nanoparticles in Photonics, Photocatalysis, Antibacterial Activity, Cytotoxicity, and Bioimaging

Deoxyribonucleic acid (DNA) capped silver nanoparticles are exceptional nanomaterials, featuring precise size and shape control enabled by DNA as a capping agent. DNA stabilizes these nanoparticles' role leading to uniform structures for diverse applications. These nanoparticles are excellent in photonics and medical applications, enhancing fluorescence and medical imaging. In this study, we explore the multifaceted applications of DNA-capped silver nanoparticles, delving into their optical, photocatalytic, antibacterial, cytotoxic, and bioimaging properties. Employing UV-visible absorption spectroscopy and scanning electron microscopy, we provide an analysis of confirmation of silver nanoparticles. The investigation demonstrates substantial photocatalytic efficacy, photodegradation of methylene blue is higher than rhodamine 6G. The presence of silver nanoparticles enhances the fluorescence of rhodamine 6G doped sol-gel glasses. Furthermore, our findings illustrate significant antibacterial effects, encompassing both Gram-positive and Gram-negative bacteria, with DNA-capped silver nanoparticles exhibiting antibacterial activity. Cytotoxicity assessments on HeLa cells reveal concentration-dependent effects, with an LC50 value of 47 µL. Additionally, the in vitro experiments with HeLa cells suggest the promising utility of DNA-capped silver nanoparticles for bioimaging applications. This comprehensive analysis highlights the multifunctionality and potential of DNA-capped silver nanoparticles, offering promising avenues for further exploration and innovation within various scientific domains, particularly in the realm of nanomaterial research.

A novel polymer-based probe for fluorescently ratiometric sensing of hydrogen sulfide with multiple applications

Hydrogen sulfide (H2S) as an endogenous signaling molecule, plays an irreplaceable role in many important physiological activities. It is also closely related to sewage treatment, wine quality evaluation, and food spoilage. Herein, we have successfully synthesized a novel polymer-based probe P1 for fluorescently ratiometric sensing of H2S with a high selectivity and sensitivity. By virtue of ring-opening metathesis polymerization (ROMP), P1 was prepared with the disulfide bond linked coumarin-norbornene dyad NB-SS-COU as energy donor, the aggregation-induced emission (AIE) fluorophore anchored norbornene NB-TPE as energy receptor, and the polyethylene glycol (PEG) attached norbornene NB-PEG as a hydrophilic chain. At the 400 nm excitation, P1 displays a bright red emission at 615 nm due to the efficient fluorescence resonance energy transfer (FRET) from energy donor COU to energy acceptor TPE. Upon addition of H2S, it shows strong COU-based blue emission at 473 nm for cleavage of the disulfide bond. We also constructed a smartphone sensing platform to conduct visual quantitative detection of H2S by calculating the B/R (blue/red) emission ratio values. Moreover, P1 can be successfully employed in evaluating the level fluctuations of endogenous and exogenous H2S in living cells, testing water samples/wine samples, and monitoring food freshness.

A molecular imprinted fluorescence sensor based on carbon quantum dots for selective detection of 4-nitrophenol in aqueous environments

P-nitrophenol (4-NP) is the most persistent and highly toxic species among nitrophenol. In this work, a novel fluorescent probe for the detection of 4-NP in aqueous environment was constructed by combining the carbon dots (CQDs) with excellent optical properties and the molecularly imprinted polymer (MIP) with favorable selectivity. The CQDs were synthesized by hydrothermal method using citric acid hydrate as carbon source and o-phenylenediamine as surface modifier, then the molecularly imprinted polymers coating on the CQDs (MIP@CQDs) were obtained by sol-gel imprinting process. The fluorescence quenching of MIP@CQDs is the results of internal filtration effect and dynamic quenching when they encounter with 4-NP. The probe is suitable for the quantitative detection of trace 4-NP in actual aqueous samples, such as tap water, wastewater and seawater, with satisfying recoveries from 95.1 % to 107.8 %, wide detection linear ranges between 0 and 144 μmol/L, low detection limit of 0.41 μmol/L and high selectivity. The detection results are consistent with those of the HPLC method. This work provides a simple, rapid and effective fluorescent detection method for trace 4-NP in aqueous environment.

Physiological roles of hydrogen sulfide in mammalian cells, tissues and organs

H2S belongs to the class of molecules known as gasotransmitters, which also includes nitric oxide (NO) and carbon monoxide (CO). Three enzymes are recognized as endogenous sources of H2S in various cells and tissues: cystathionine g-lyase (CSE), cystathionine β-synthase (CBS) and 3-mercaptopyruvate sulfurtransferase (3-MST). The current article reviews the regulation of these enzymes as well as the pathways of their enzymatic and non-enzymatic degradation and elimination. The multiple interactions of H2S with other labile endogenous molecules (e.g. NO) and reactive oxygen species are also outlined. The various biological targets and signaling pathways are discussed, with special reference to H2S and oxidative posttranscriptional modification of proteins, the effect of H2S on channels and intracellular second messenger pathways, the regulation of gene transcription and translation and the regulation of cellular bioenergetics and metabolism. The pharmacological and molecular tools currently available to study H2S physiology are also reviewed, including their utility and limitations. In subsequent sections, the role of H2S in the regulation of various physiological and cellular functions is reviewed. The physiological role of H2S in various cell types and organ systems are overviewed. Finally, the role of H2S in the regulation of various organ functions is discussed as well as the characteristic bell-shaped biphasic effects of H2S. In addition, key pathophysiological aspects, debated areas, and future research and translational areas are identified A wide array of significant roles of H2S in the physiological regulation of all organ functions emerges from this review.

A two-photon fluorescence silica nanoparticle-based FRET nanoprobe platform for effective ratiometric bioimaging of intracellular endogenous adenosine triphosphate

Two-photon fluorescence imaging is one of the most attractive imaging techniques for monitoring important biomolecules in the biomedical field due to its advantages of low light scattering, high penetration depth, and suppressed photodamage/phototoxicity under near-infrared excitation. However, in actual biological imaging, organic two-photon fluorescent dyes have disadvantages such as high biological toxicity and their fluorescence efficiency is easily affected by the complex environment in organisms. In this study, a novel nanoprobe platform with two-photon dye-doped silica nanoparticles was developed for FRET-based ratiometric biosensing and bioimaging, with endogenous ATP chosen as the target for detection. The nanoprobe has three components: (1) a two-photon dye-doped silica nanoparticle core, which serves as an energy donor for FRET; (2) amino-modified hairpin primers with carboxy fluorescein as an energy acceptor for FRET; (3) an aptamer acting as a recognition unit to realize the probing function. The nanoprobe showed ratiometric fluorescence responses for ATP detection with high sensitivity and high selectivity in vivo. Moreover, the nanoprobe showed satisfactory ratiometric two-photon fluorescence imaging of endogenous ATP in living cells and tissues (penetration depth of 190 nm). These results indicated that novel two-photon silica nanoparticles can be constructed by doping a two-photon fluorescent dye into silica nanoparticles, and they can effectively solve the disadvantages of two-photon fluorescent dyes. These excellent performances indicate that this novel nanoprobe platform will become a very valuable molecular imaging tool, which can be widely used in the biomedical field for drug screening and disease diagnosis and other related research.

Methods of green synthesis of Au NCs with emphasis on their morphology: A mini-review

Greener synthetic methods are becoming more popular as a means of reducing environmental pollution caused by reaction byproducts. Another important advantage of green methods is their low cost and the abundance of raw materials. Herein, we investigate the green Au nanoclusters (NCs) using microorganisms (bacteria and fungi) and plant extraction with various shapes and development routes. Natural products derived from plants, tea, coffee, banana, simple amino acids, enzyme, sugar, and glucose have been used as reductants and as capping agents during synthesis in literature. The synthesis techniques are generally chemical, physical and green methods. Green synthesis of Au NCs using bacteria and fungi can be divided into intracellular and extracellular. In an intracellular manner, bacterial cells are implanted in a culture medium containing salt and heated under suitable growth conditions. However, in an extracellular manner, the Au ions are directed from the outside into the cell. Thus, these methods are considered as a better alternative to chemical and physical synthesis. The research on green synthesis of Au nanoparticles (NPs) and its influence on their size and morphology are summarized in this review.

Nitrogen, silicon co-doped carbon dots as the fluorescence nanoprobe for trace p-nitrophenol detection based on inner filter effect

P-nitrophenol (PNP) has been widely applied to industry processing for many purposes, but the persistence and toxicity of residuum may pose risks to human health. To analyze PNP in industrial and agricultural wastewater, a versatile fluorescent probe sensing platform was proposed. In this work, we devised a fluorescence approach that utilized nitrogen, silicon co-doped carbon dots (N,Si-CDs) to monitor PNP originating from the inner filter effect (IFE). The N,Si-CDs were generated in a one-step hydrothermal synthesis, and which possessed outstanding fluorescence signal and water-dispersity. Emission at 441 nm was monitored with excitation at 360 nm using a common spectrofluorometer. The method achieved an exceptionally low limit of detection (LOD) of 0.011 μM. Furthermore, this method not only eliminates the interference from metal ions and acid ions, but also provides a potential application prospect for N,Si-CDs in the field of water monitoring. Analysis of tap and lake water led to 93.30-106.30% recoveries and <1% relative standard deviation at 2.5-25 μM PNP concentrations.