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For: Song Y, Zheng K, Brede DA, Gomes T, Xie L, Kassaye Y, Salbu B, Tollefsen KE. Multiomics Point of Departure (moPOD) Modeling Supports an Adverse Outcome Pathway Network for Ionizing Radiation. Environ Sci Technol 2023;57:3198-3205. [PMID: 36799527 PMCID: PMC9979642 DOI: 10.1021/acs.est.2c04917] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/08/2022] [Revised: 02/07/2023] [Accepted: 02/08/2023] [Indexed: 06/07/2023]
Number Cited by Other Article(s)
1
Tian M, Ding X, Pang Y, Xu D, Sun Y, Xia P. Transcriptomic dose-response by UVC and heavy ion radiation reveal pathways to immune impairment. Toxicol In Vitro 2025;108:106086. [PMID: 40419229 DOI: 10.1016/j.tiv.2025.106086] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2024] [Revised: 04/27/2025] [Accepted: 05/22/2025] [Indexed: 05/28/2025]
2
Fan T, Han T, Gu A, Jin J, Cui Q, Guo J, Zhang X, Yu H, Shi W. Novel Approach to Screen Endocrine-Disrupting Chemicals via Endocrine-Enhanced Reduced Human Transcriptome. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2025;59:4845-4856. [PMID: 40042996 DOI: 10.1021/acs.est.4c13159] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/19/2025]
3
Lislien M, Kuchovska E, Kapr J, Duale N, Andersen JM, Dirven H, Myhre O, Fritsche E, Koch K, Wojewodzic MW. Transcriptomic characterization of 2D and 3D human induced pluripotent stem cell-based in vitro models as New Approach Methodologies for developmental neurotoxicity testing. Toxicology 2025;510:154000. [PMID: 39551125 DOI: 10.1016/j.tox.2024.154000] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2024] [Revised: 10/30/2024] [Accepted: 11/13/2024] [Indexed: 11/19/2024]
4
Zhou Z, Pennings JLA, Sahlin U. Causal, predictive or observational? Different understandings of key event relationships for adverse outcome pathways and their implications on practice. ENVIRONMENTAL TOXICOLOGY AND PHARMACOLOGY 2025;113:104597. [PMID: 39622398 DOI: 10.1016/j.etap.2024.104597] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/28/2024] [Revised: 11/22/2024] [Accepted: 11/26/2024] [Indexed: 12/06/2024]
5
Lai W, Song Y, Tollefsen KE, Hvidsten TR. SOLA: dissecting dose-response patterns in multi-omics data using a semi-supervised workflow. Front Genet 2024;15:1508521. [PMID: 39687738 PMCID: PMC11647027 DOI: 10.3389/fgene.2024.1508521] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2024] [Accepted: 11/12/2024] [Indexed: 12/18/2024]  Open
6
Shi C, Cheng L, Yu Y, Chen S, Dai Y, Yang J, Zhang H, Chen J, Geng N. Multi-omics integration analysis: Tools and applications in environmental toxicology. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2024;360:124675. [PMID: 39103035 DOI: 10.1016/j.envpol.2024.124675] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2024] [Revised: 07/08/2024] [Accepted: 08/03/2024] [Indexed: 08/07/2024]
7
Silva AC, Loizou GD, McNally K, Osborne O, Potter C, Gott D, Colbourne JK, Viant MR. A novel method to derive a human safety limit for PFOA by gene expression profiling and modelling. FRONTIERS IN TOXICOLOGY 2024;6:1368320. [PMID: 38577564 PMCID: PMC10991825 DOI: 10.3389/ftox.2024.1368320] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2024] [Accepted: 03/01/2024] [Indexed: 04/06/2024]  Open
8
Hansen BH, Tarrant AM, Lenz PH, Roncalli V, Almeda R, Broch OJ, Altin D, Tollefsen KE. Effects of petrogenic pollutants on North Atlantic and Arctic Calanus copepods: From molecular mechanisms to population impacts. AQUATIC TOXICOLOGY (AMSTERDAM, NETHERLANDS) 2024;267:106825. [PMID: 38176169 DOI: 10.1016/j.aquatox.2023.106825] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2023] [Revised: 12/19/2023] [Accepted: 12/27/2023] [Indexed: 01/06/2024]
9
Wan C, Ma H, Liu J, Liu F, Liu J, Dong G, Zeng X, Li D, Yu Z, Wang X, Li J, Zhang G. Quantitative relationships of FAM50B and PTCHD3 methylation with reduced intelligence quotients in school aged children exposed to lead: Evidence from epidemiological and in vitro studies. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024;907:167976. [PMID: 37866607 DOI: 10.1016/j.scitotenv.2023.167976] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/26/2023] [Revised: 09/22/2023] [Accepted: 10/18/2023] [Indexed: 10/24/2023]
10
Baudiffier D, Audouze K, Armant O, Frelon S, Charles S, Beaudouin R, Cosio C, Payrastre L, Siaussat D, Burgeot T, Mauffret A, Degli Esposti D, Mougin C, Delaunay D, Coumoul X. Editorial trend: adverse outcome pathway (AOP) and computational strategy - towards new perspectives in ecotoxicology. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024;31:6587-6596. [PMID: 37966636 DOI: 10.1007/s11356-023-30647-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/15/2023] [Accepted: 10/18/2023] [Indexed: 11/16/2023]
11
Cui T, Lan Y, Lu Y, Yu F, Lin S, Fu Y, Qiu J, Niu G. Isoorientin ameliorates H2O2-induced apoptosis and oxidative stress in chondrocytes by regulating MAPK and PI3K/Akt pathways. Aging (Albany NY) 2023;15:204768. [PMID: 37277114 PMCID: PMC10292868 DOI: 10.18632/aging.204768] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2023] [Accepted: 04/18/2023] [Indexed: 06/07/2023]
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