1
|
Mahale SD, Prasad A, Mhaske SB. Functionalized quinolones and isoquinolones via 1,2-difunctionalization of arynes: synthesis of antagonist agent AS2717638 and floxacin key intermediates. Chem Commun (Camb) 2024; 61:133-136. [PMID: 39620596 DOI: 10.1039/d4cc05671j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/07/2024]
Abstract
Quinolones and isoquinolones are privileged scaffolds in synthetic/medicinal chemistry and drug discovery due to their unique chemical structures and intrinsic properties. Herein, we reveal a transition-metal-free approach for their synthesis from the reaction of dimethyl-2-((phenylamino)methylene)malonate with aryne precursors under mild conditions. The substrate scope is broad, accommodating a wide range of functional groups. The synthetic utility of the developed protocol has been demonstrated in the total synthesis of the potent antagonist agent AS2717638 and key intermediates of floxacin congeners. The gram-scale experiments illustrate its synthetic potential.
Collapse
Affiliation(s)
- Sachin D Mahale
- Division of Organic Chemistry, CSIR-National Chemical Laboratory (CSIR-NCL), Pune-411008, India.
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad-201002, India
| | - Anamika Prasad
- Division of Organic Chemistry, CSIR-National Chemical Laboratory (CSIR-NCL), Pune-411008, India.
| | - Santosh B Mhaske
- Division of Organic Chemistry, CSIR-National Chemical Laboratory (CSIR-NCL), Pune-411008, India.
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad-201002, India
| |
Collapse
|
2
|
Chase DH, Bebenek AM, Nie P, Jaime-Figueroa S, Butrin A, Castro DA, Hines J, Linhares BM, Crews CM. Development of a Small Molecule Downmodulator for the Transcription Factor Brachyury. Angew Chem Int Ed Engl 2024; 63:e202316496. [PMID: 38348945 PMCID: PMC11588018 DOI: 10.1002/anie.202316496] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2023] [Indexed: 02/29/2024]
Abstract
Brachyury is an oncogenic transcription factor whose overexpression drives chordoma growth. The downmodulation of brachyury in chordoma cells has demonstrated therapeutic potential, however, as a transcription factor it is classically deemed "undruggable". Given that direct pharmacological intervention against brachyury has proven difficult, attempts at intervention have instead targeted upstream kinases. Recently, afatinib, an FDA-approved kinase inhibitor, has been shown to modulate brachyury levels in multiple chordoma cell lines. Herein, we use afatinib as a lead to undertake a structure-based drug design approach, aided by mass-spectrometry and X-ray crystallography, to develop DHC-156, a small molecule that more selectively binds brachyury and downmodulates it as potently as afatinib. We eliminated kinase-inhibition from this novel scaffold while demonstrating that DHC-156 induces the post-translational downmodulation of brachyury that results in an irreversible impairment of chordoma tumor cell growth. In doing so, we demonstrate the feasibility of direct brachyury modulation, which may further be developed into more potent tool compounds and therapies.
Collapse
Affiliation(s)
- Davis H. Chase
- Department of Chemistry, Yale University, New Haven, CT 06511
| | - Adrian M. Bebenek
- Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, CT 06511
| | - Pengju Nie
- Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, CT 06511
| | - Saul Jaime-Figueroa
- Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, CT 06511
| | - Arseniy Butrin
- Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, CT 06511
| | - Danielle A. Castro
- Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, CT 06511
| | - John Hines
- Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, CT 06511
| | - Brian M. Linhares
- Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, CT 06511
| | - Craig M. Crews
- Department of Chemistry, Yale University, New Haven, CT 06511
- Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, CT 06511
| |
Collapse
|
3
|
Vijayakumar A, Manod M, Krishna RB, Mathew A, Mohan C. Diversely functionalized isoquinolines and their core-embedded heterocyclic frameworks: a privileged scaffold for medicinal chemistry. RSC Med Chem 2023; 14:2509-2534. [PMID: 38107174 PMCID: PMC10718595 DOI: 10.1039/d3md00248a] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2023] [Accepted: 08/23/2023] [Indexed: 12/19/2023] Open
Abstract
Isoquinoline-enrooted organic small-molecules represent a challenging molecular target in the organic synthesis arsenal attributed to their structural diversity and therapeutic importance. Into the bargain, isoquinolines are significant structural frameworks in modern medicinal chemistry and drug development. Consequently, synthetic organic and medicinal chemists have been intensely interested in efficient synthetic tactics for the sustainable construction of isoquinoline frameworks and their derivatives in enantiopure or racemic forms. This review accentuates an overview of the literature on the modern synthetic approaches exploited in synthesising isoquinolines and their core embedded heterocyclic skeletons from 2021 to 2022. In detail, the methodologies and inspected pharmacological studies for the array of diversely functionalized isoquinolines or their core-embedded heterocyclic/carbocyclic structures involving the introduction of substituents at C-1, C-3, and C-4 carbon and N-2 atom, bond constructions at the C1-N2 atom and C3-N2 atom, and structural scaffolding within isoquinoline compounds have been reviewed. This intensive study highlights the need for and relevance of relatively unexplored bioisosterism employing isoquinoline-based small-molecules in drug design.
Collapse
Affiliation(s)
- Archana Vijayakumar
- School of Chemical Sciences, Mahatma Gandhi University Kottayam 686560 India
| | - M Manod
- School of Chemical Sciences, Mahatma Gandhi University Kottayam 686560 India
| | - R Bharath Krishna
- Institute for Integrated Programmes and Research in Basic Sciences, Mahatma Gandhi University Kottayam 686560 India
| | - Abra Mathew
- School of Chemical Sciences, Mahatma Gandhi University Kottayam 686560 India
- Department of Chemistry, Indian Institute of Technology Palakkad Kerala 678577 India
| | - Chithra Mohan
- School of Chemical Sciences, Mahatma Gandhi University Kottayam 686560 India
| |
Collapse
|
4
|
Xu X, Song L, Feng H, Van der Eycken EV. Direct Access to 4-Substituted Isoquinolones via a Sequential Pd-Catalyzed Cyclization/Base-Promoted Aromatization/Ring-Opening of N-Propargyl-1,3-oxazolidines. MOLECULAR CATALYSIS 2022. [DOI: 10.1016/j.mcat.2022.112231] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
|
5
|
Ding MW, Zhao L, Yang ML, Sun M. One-Pot Synthesis of 3-(1,2,3,4-Tetrahydroisoquinolin-1-yl)-isoquinolin-1(2H)-ones by DEAD-Promoted Oxidative Ugi–Wittig Reaction Starting from Phosphonium Salt Precursors. Synlett 2022. [DOI: 10.1055/a-1661-3378] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Abstract
AbstractA new one-pot synthesis of 3-(1,2,3,4-tetrahydroisoquinolin-1-yl)-isoquinolin-1(2H)-ones by DEAD-promoted oxidative Ugi–Wittig reaction was developed. The sequential reactions of (2-carboxybenzyl)triphenylphosphonium salts, isocyanides, and N-aryl-1,2,3,4-tetrahydroisoquinolines produced 3-(1,2,3,4-tetrahydroisoquinolin-1-yl)-isoquinolin-1(2H)-ones in moderate to good overall yields in the presence of DEAD and Et3N.
Collapse
|