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Li Y, Jiang L, Liu Y, Lin Y, Li S, Xu C, Xian M. Design Strategy of PepNzymes-SH for an Emerging Catalyst with Serine Hydrolase-Like Functionality. ACS APPLIED MATERIALS & INTERFACES 2025; 17:8821-8835. [PMID: 39874419 DOI: 10.1021/acsami.4c19978] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/30/2025]
Abstract
Serine hydrolases, as a class of green catalysts with hydrolytic and dehydrating activities, hold significant application value in the fields of biosynthesis and organic synthesis. However, practical applications face numerous challenges, including maintaining enzyme stability and managing usage costs. PepNzymes-SH, an emerging green catalytic material with enzyme-like activity, overcomes the operational limitations of natural enzymes and holds great promise as a substitute for hydrolases. Unfortunately, a systematic review of the design strategies for PepNzymes-SH is currently lacking. The core significance of this report lies in providing researchers with a comprehensive understanding and theoretical guidance through the summarization and performance evaluation of different design strategies of PepNzymes-SH. This review summarizes strategies for simulating and enhancing the stability of serine hydrolase active sites, oxyanion holes, and hydrophobic environmental structures. By comparing their catalytic activities, we assess the performance changes brought about by different strategies. Furthermore, the applications of PepNzymes-SH in the chemical, biomedicine, and environmental fields are also discussed.
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Affiliation(s)
- Yunfei Li
- CAS Key Laboratory of Biobased Materials, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao 266101, China
- Shandong Energy Institute, Qingdao 266101, China
- Qingdao New Energy Shandong Laboratory, Qingdao 266101, China
- University of Chinese Academy of Sciences, Beijing 101408, China
| | - Long Jiang
- CAS Key Laboratory of Biobased Materials, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao 266101, China
- Shandong Energy Institute, Qingdao 266101, China
- Qingdao New Energy Shandong Laboratory, Qingdao 266101, China
- University of Chinese Academy of Sciences, Beijing 101408, China
| | - Yaojie Liu
- CAS Key Laboratory of Biobased Materials, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao 266101, China
- Shandong Energy Institute, Qingdao 266101, China
- Qingdao New Energy Shandong Laboratory, Qingdao 266101, China
| | - Yu Lin
- CAS Key Laboratory of Biobased Materials, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao 266101, China
- Shandong Energy Institute, Qingdao 266101, China
- Qingdao New Energy Shandong Laboratory, Qingdao 266101, China
- University of Chinese Academy of Sciences, Beijing 101408, China
| | - Shuhua Li
- CAS Key Laboratory of Biobased Materials, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao 266101, China
- Shandong Energy Institute, Qingdao 266101, China
- Qingdao New Energy Shandong Laboratory, Qingdao 266101, China
- University of Chinese Academy of Sciences, Beijing 101408, China
| | - Chao Xu
- CAS Key Laboratory of Biobased Materials, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao 266101, China
- Shandong Energy Institute, Qingdao 266101, China
- Qingdao New Energy Shandong Laboratory, Qingdao 266101, China
- University of Chinese Academy of Sciences, Beijing 101408, China
| | - Mo Xian
- CAS Key Laboratory of Biobased Materials, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao 266101, China
- Shandong Energy Institute, Qingdao 266101, China
- Qingdao New Energy Shandong Laboratory, Qingdao 266101, China
- University of Chinese Academy of Sciences, Beijing 101408, China
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Zhang Z, Luo E, Wang W, Huang D, Liu J, Du Z. Molecularly Imprinted Nanozymes with Substrate Specificity: Current Strategies and Future Direction. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2025; 21:e2408343. [PMID: 39655386 DOI: 10.1002/smll.202408343] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/13/2024] [Revised: 11/29/2024] [Indexed: 02/06/2025]
Abstract
Molecular imprinting technology (MIT) stands out for its exceptional simplicity and customization capabilities and has been widely employed in creating artificial antibodies that can precisely recognize and efficiently capture target molecules. Concurrently, nanozymes have emerged as promising enzyme mimics in the biomedical field, characterized by their remarkable stability, ease of production scalability, robust catalytic activity, and high tunability. Drawing inspiration from natural enzymes, molecularly imprinted nanozymes combine the unique benefits of both MIT and nanozymes, thereby conferring biomimetic catalysts with substrate specificity and catalytic selectivity. In this review, the latest strategies for the fabrication of molecularly imprinted nanozymes, focusing on the use of organic polymers and inorganic nanomaterials are explored. Additionally, cutting-edge techniques for generating atom-layer-imprinted islands with ultra-thin atomic-scale thickness is summarized. Their applications are particularly noteworthy in the fields of catalyst optimization, detection techniques, and therapeutic strategies, where they boost reaction selectivity and efficiency, enable precise identification and quantification of target substances, and enhance therapeutic effectiveness while minimizing adverse effects. Lastly, the prevailing challenges in the field and delineate potential avenues for future progress is encapsulated. This review will foster advancements in artificial enzyme technology and expand its applications.
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Affiliation(s)
- Zhou Zhang
- Department of Biomedical Engineering, Research Center for Nano-Biomaterials & Regenerative Medicine, College of Artificial Intelligence, Taiyuan University of Technology, Taiyuan, 030024, China
| | - Ergui Luo
- Key Laboratory of Magnetic Molecules and Magnetic Information Materials of Ministry of Education, School of Chemistry and Materials Science, Shanxi Normal University, Taiyuan, 030032, China
| | - Wenjuan Wang
- Department of Biomedical Engineering, Research Center for Nano-Biomaterials & Regenerative Medicine, College of Artificial Intelligence, Taiyuan University of Technology, Taiyuan, 030024, China
| | - Di Huang
- Department of Biomedical Engineering, Research Center for Nano-Biomaterials & Regenerative Medicine, College of Artificial Intelligence, Taiyuan University of Technology, Taiyuan, 030024, China
- Shanxi-Zheda Institute of Advanced Materials and Chemical Engineering, Taiyuan, 030060, China
| | - Juewen Liu
- Department of Chemistry, Waterloo Institute for Nanotechnology, University of Waterloo, Waterloo, Ontario, N2L 3G1, Canada
| | - Zhi Du
- Department of Biomedical Engineering, Research Center for Nano-Biomaterials & Regenerative Medicine, College of Artificial Intelligence, Taiyuan University of Technology, Taiyuan, 030024, China
- Shanxi-Zheda Institute of Advanced Materials and Chemical Engineering, Taiyuan, 030060, China
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Pujari AK, Kaur R, Reddy YN, Paul S, Gogde K, Bhaumik J. Design and Synthesis of Metalloporphyrin Nanoconjugates for Dual Light-Responsive Antimicrobial Photodynamic Therapy. J Med Chem 2024; 67:2004-2018. [PMID: 38241140 DOI: 10.1021/acs.jmedchem.3c01841] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2024]
Abstract
Antimicrobial photodynamic therapy (APDT) utilizes photosensitizers (PSs) that eradicate a broad spectrum of bacteria in the presence of light and molecular oxygen. On the other hand, some light sources such as ultraviolet (UVB and UVC) have poor penetration and high cytotoxicity, leading to undesired PDT of the PSs. Herein, we have synthesized conjugatable mesosubstituted porphyrins and extensively characterized them. Time-dependent density functional theory (TD-DFT) calculations revealed that metalloporphyrin EP (5) is a suitable candidate for further applications. Subsequently, the metalloporphyrin was conjugated with lignin-based zinc oxide nanocomposites (ZnOAL and ZnOKL) to develop hydrophilic nanoconjugates (ZnOAL@EP and ZnOKL@EP). Upon dual light (UV + green light) exposure, nanoconjugates showed enhanced singlet oxygen generation ability and also demonstrated pH responsiveness. These nanoconjugates displayed significantly improved APDT efficiency (4-7 fold increase) to treat bacterial infection under dual light irradiation.
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Affiliation(s)
- Anil Kumar Pujari
- Department of Bioproduct Chemistry, Center of Innovative and Applied Bioprocessing (CIAB), Knowledge City, Sector 81, S.A.S. Nagar, Mohali, Punjab 140308, India
- Indian Institute of Science Education and Research (IISER), Knowledge City, Sector 81, S. A. S. Nagar, Mohali, Punjab 140306, India
| | - Ravneet Kaur
- Department of Bioproduct Chemistry, Center of Innovative and Applied Bioprocessing (CIAB), Knowledge City, Sector 81, S.A.S. Nagar, Mohali, Punjab 140308, India
| | - Yeddula Nikhileshwar Reddy
- Department of Bioproduct Chemistry, Center of Innovative and Applied Bioprocessing (CIAB), Knowledge City, Sector 81, S.A.S. Nagar, Mohali, Punjab 140308, India
- Indian Institute of Science Education and Research (IISER), Knowledge City, Sector 81, S. A. S. Nagar, Mohali, Punjab 140306, India
| | - Shatabdi Paul
- Department of Bioproduct Chemistry, Center of Innovative and Applied Bioprocessing (CIAB), Knowledge City, Sector 81, S.A.S. Nagar, Mohali, Punjab 140308, India
- Regional Centre for Biotechnology (RCB), Faridabad, Haryana 121001, India
| | - Kunal Gogde
- Department of Bioproduct Chemistry, Center of Innovative and Applied Bioprocessing (CIAB), Knowledge City, Sector 81, S.A.S. Nagar, Mohali, Punjab 140308, India
- University Institute of Pharmaceutical Sciences (UIPS), Panjab University, Sector 14, Chandigarh 160014, India
| | - Jayeeta Bhaumik
- Department of Bioproduct Chemistry, Center of Innovative and Applied Bioprocessing (CIAB), Knowledge City, Sector 81, S.A.S. Nagar, Mohali, Punjab 140308, India
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Chen T, Lu Y, Xiong X, Qiu M, Peng Y, Xu Z. Hydrolytic nanozymes: Preparation, properties, and applications. Adv Colloid Interface Sci 2024; 323:103072. [PMID: 38159448 DOI: 10.1016/j.cis.2023.103072] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2023] [Revised: 12/11/2023] [Accepted: 12/19/2023] [Indexed: 01/03/2024]
Abstract
Hydrolytic nanozymes, as promising alternatives to hydrolytic enzymes, can efficiently catalyze the hydrolysis reactions and overcome the operating window limitations of natural enzymes. Moreover, they exhibit several merits such as relatively low cost, easier recovery and reuse, improved operating stability, and adjustable catalytic properties. Consequently, they have found relevance in practical applications such as organic synthesis, chemical weapon degradation, and biosensing. In this review, we highlight recent works addressing the broad topic of the development of hydrolytic nanozymes. We review the preparation, properties, and applications of six types of hydrolytic nanozymes, including AuNP-based nanozymes, polymeric nanozymes, surfactant assemblies, peptide assemblies, metal and metal oxide nanoparticles, and MOFs. Last, we discuss the remaining challenges and future directions. This review will stimulate the development and application of hydrolytic nanozymes.
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Affiliation(s)
- Tianyou Chen
- Ministry of Education Key Laboratory for the Green Preparation and Application of Functional Materials, Hubei Key Laboratory of Polymer Materials, School of Materials Science and Engineering, Hubei University, Wuhan 430062, China.
| | - Yizhuo Lu
- Ministry of Education Key Laboratory for the Green Preparation and Application of Functional Materials, Hubei Key Laboratory of Polymer Materials, School of Materials Science and Engineering, Hubei University, Wuhan 430062, China
| | - Xiaorong Xiong
- Ministry of Education Key Laboratory for the Green Preparation and Application of Functional Materials, Hubei Key Laboratory of Polymer Materials, School of Materials Science and Engineering, Hubei University, Wuhan 430062, China
| | - Meishuang Qiu
- Ministry of Education Key Laboratory for the Green Preparation and Application of Functional Materials, Hubei Key Laboratory of Polymer Materials, School of Materials Science and Engineering, Hubei University, Wuhan 430062, China
| | - Yan Peng
- Ministry of Education Key Laboratory for the Green Preparation and Application of Functional Materials, Hubei Key Laboratory of Polymer Materials, School of Materials Science and Engineering, Hubei University, Wuhan 430062, China
| | - Zushun Xu
- Ministry of Education Key Laboratory for the Green Preparation and Application of Functional Materials, Hubei Key Laboratory of Polymer Materials, School of Materials Science and Engineering, Hubei University, Wuhan 430062, China.
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