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Pupavac D, Nikolić AM, Webster JP, Curtis TP, And Elković B, Newhouse TR, Opsenica IM. Computational Rational Design of Bridgehead Nitrogen Heterocyclic Azobenzene Photoswitches. J Org Chem 2025. [PMID: 40371946 DOI: 10.1021/acs.joc.5c00731] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/16/2025]
Abstract
Azobenzenes are proven to be one of the most successful molecular photoswitches applied across different fields such as organic chemistry, material science, cosmetics, and pharmaceuticals. Such a widespread implementation is possible because of their photochromic properties contingent upon the substitution pattern and aryl-core nature. In recent endeavors of molecular design, replacing one or both phenyl rings with heteroaromatics turned out to be a good strategy to access compounds with improved photoswitching properties, as well as to expand molecular diversity. One of the challenges related to the design of new azobenzene photoswitches is that it often includes the synthesis of large libraries of compounds due to limited methods for prediction of their properties. Herein, we present a computationally driven workflow for the design and synthesis of a novel class of azobenzene photoswitches, heteroaryl azobenzenes with N-bridgehead heterocycles─pyrazolo[1,5-a]pyrimidine and 1,2,4-triazolo[1,5-a]pyrimidine. A small library of heteroaryl photoswitches was synthesized, and their photochemical properties were evaluated. Subsequently, these results were used to validate a computational approach, which included the in silico evaluation of a large library of designed photoswitch candidates leading to the synthesis of a new photoswitch with improved spectral properties, red-shifted λmax values.
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Affiliation(s)
- Dunja Pupavac
- Innovative Centre, Faculty of Chemistry, Ltd., Studentski Trg 12-16, 11158 Belgrade, Serbia
| | - Andrea M Nikolić
- University of Belgrade, Faculty of Chemistry, P.O. Box 51, Studentski Trg 16, 11158 Belgrade, Serbia
| | - John-Paul Webster
- Department of Chemistry, Yale University, New Haven, Connecticut 06520-8107, United States
| | - Theodore P Curtis
- Department of Chemistry, Yale University, New Haven, Connecticut 06520-8107, United States
| | - Boban And Elković
- University of Belgrade, Faculty of Chemistry, P.O. Box 51, Studentski Trg 16, 11158 Belgrade, Serbia
| | - Timothy R Newhouse
- Department of Chemistry, Yale University, New Haven, Connecticut 06520-8107, United States
| | - Igor M Opsenica
- University of Belgrade, Faculty of Chemistry, P.O. Box 51, Studentski Trg 16, 11158 Belgrade, Serbia
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2
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Koppayithodi S, Jana P, Bandyopadhyay S. Heteroarylstilbenes: Visible-Light-Tunable Photochromic Systems in Water. J Org Chem 2025; 90:4518-4524. [PMID: 40111398 DOI: 10.1021/acs.joc.4c02844] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/22/2025]
Abstract
Visible-light switchable stilbenes with a stable Z isomer that can function in aqueous media are notably rare in the literature. The synthesis and characterization of a set of 12 novel molecules featuring an aryl-substituted heterostilbene motif, a class of visible-light switchable stilbenes, are presented here. Leveraging an electronic push-pull mechanism, strategic selection of electron donors, and an indolinium moiety as the acceptor, we achieved precise tuning of the switching wavelengths.
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Affiliation(s)
- Sudeep Koppayithodi
- Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur, Nadia, West Bengal, India 741246
| | - Palash Jana
- Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur, Nadia, West Bengal, India 741246
| | - Subhajit Bandyopadhyay
- Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur, Nadia, West Bengal, India 741246
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3
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Jelínková V, Dellai A, Verwaerde L, Rodriguez V, Fecková M, Vachtlová M, Podlesný J, Klikar M, Sempé B, Hugget M, Pařík P, Pytela O, Castet F, Růžičková Z, Bureš F. Property Tuning in N-Methylpyrrole Azo-Photoswitches via Modification of the Peripheral Substituents. Chemistry 2025; 31:e202404221. [PMID: 39731460 DOI: 10.1002/chem.202404221] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2024] [Revised: 12/20/2024] [Accepted: 12/23/2024] [Indexed: 12/29/2024]
Abstract
Differently substituted pyrrole-azo-benzene molecular photoswitches were prepared in a straightforward synthetic way. Their fundamental properties were investigated by XRD analysis, differential scanning calorimetry, thermogravimetric analysis, cyclic voltammetry, UV-Vis absorption spectroscopy, Hyper-Rayleigh Scattering, and NMR spectroscopy; the experimental results were further corroborated by DFT calculations. Thermal robustness, the HOMO/LUMO levels, and the absorption properties were altered mostly by substituting the N-methylpyrrole moiety and further fine-tuned by modifying the benzene substituents. The pyrrole substituent also proved crucial for the second-order non-linear optical (NLO) response as well as the photoswitching performance. Both fast and slow molecular switches can be designed with the half-life of the (Z) -isomer ranging from 48 seconds to 23.28 hours and the E/Z molar ratio up to 12/88. This comprehensive study allowed elucidation of the fundamental structure-property relationships and subsequently addresses the key aspects of the property tuning via substitution in molecular azo-photoswitches.
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Affiliation(s)
- Veronika Jelínková
- Institute of Organic Chemistry and Technology, Faculty of Chemical Technology, University of Pardubice, Studentská 573, Pardubice, 53210, Czech Republic
| | - Angela Dellai
- Institut des Sciences Moléculaires, CNRS, Bordeaux INP, ISM, UMR 5255, University of Bordeaux, F-33405 Cedex, Talence, France
| | - Lauryne Verwaerde
- Institut des Sciences Moléculaires, CNRS, Bordeaux INP, ISM, UMR 5255, University of Bordeaux, F-33405 Cedex, Talence, France
| | - Vincent Rodriguez
- Institut des Sciences Moléculaires, CNRS, Bordeaux INP, ISM, UMR 5255, University of Bordeaux, F-33405 Cedex, Talence, France
| | - Michaela Fecková
- Institute of Technology and Business in České Budějovice, Okružní 517/10, České Budějovice, 37001, Czech Republic
| | - Martina Vachtlová
- Institute of Technology and Business in České Budějovice, Okružní 517/10, České Budějovice, 37001, Czech Republic
| | - Jan Podlesný
- Institute of Technology and Business in České Budějovice, Okružní 517/10, České Budějovice, 37001, Czech Republic
| | - Milan Klikar
- Institute of Organic Chemistry and Technology, Faculty of Chemical Technology, University of Pardubice, Studentská 573, Pardubice, 53210, Czech Republic
| | - Bixente Sempé
- Institut des Sciences Moléculaires, CNRS, Bordeaux INP, ISM, UMR 5255, University of Bordeaux, F-33405 Cedex, Talence, France
| | - Matt Hugget
- Institut des Sciences Moléculaires, CNRS, Bordeaux INP, ISM, UMR 5255, University of Bordeaux, F-33405 Cedex, Talence, France
| | - Patrik Pařík
- Institute of Organic Chemistry and Technology, Faculty of Chemical Technology, University of Pardubice, Studentská 573, Pardubice, 53210, Czech Republic
| | - Oldřich Pytela
- Institute of Organic Chemistry and Technology, Faculty of Chemical Technology, University of Pardubice, Studentská 573, Pardubice, 53210, Czech Republic
| | - Frédéric Castet
- Institut des Sciences Moléculaires, CNRS, Bordeaux INP, ISM, UMR 5255, University of Bordeaux, F-33405 Cedex, Talence, France
| | - Zdeňka Růžičková
- Department of General and Inorganic Chemistry, University of Pardubice, Studentská 573, Pardubice, 53210, Czech Republic
| | - Filip Bureš
- Institute of Organic Chemistry and Technology, Faculty of Chemical Technology, University of Pardubice, Studentská 573, Pardubice, 53210, Czech Republic
- Institute of Technology and Business in České Budějovice, Okružní 517/10, České Budějovice, 37001, Czech Republic
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Bhunia S, Box SM, Bera S, Dolai A, Samanta S. Progress of Photoantibiotics in Overcoming Antibiotic Resistance. ChemMedChem 2025; 20:e202400613. [PMID: 39474944 DOI: 10.1002/cmdc.202400613] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2024] [Revised: 10/28/2024] [Indexed: 02/18/2025]
Abstract
Antibiotic resistance has emerged as a global public health crisis in the 21st century, leading to treatment failures. To address this issue, the medical and pharmaceutical sectors are confronted with two challenges: i) finding potent new antimicrobial agents that would work against resistant-pathogens, and ii) developing conceptually new or unconventional strategies by which a particular antibiotic would remain effective persistently. Photopharmacology with the aid of reversibly controllable light-active antibiotics that we call "photoantibiotics" shows great promise to meet the second challenge, which has inspired many research laboratories worldwide to align their research in inventing or developing such antibiotics. In this review, we have given an overview of the progress made over the last ten years or so towards developing such photoantibiotics. Although making such antibiotics that hold high antimicrobial potency like the native drugs and subsequently maintain a significant activity difference between light-irradiated and non-irradiated states is very challenging, the progress being reported here demonstrates the feasibility of various approaches to engineer photoantibiotics. This review provides a future perspective on the use of such antibiotics in clinical practice with the identification of potential problems and their solutions.
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Affiliation(s)
- Supriya Bhunia
- Department of Chemistry, University of Calcutta, 92 A.P.C. Road, Kolkata, West Bengal, 700009, India
| | - Sk Majid Box
- Department of Chemistry, University of Calcutta, 92 A.P.C. Road, Kolkata, West Bengal, 700009, India
| | - Satyajit Bera
- Department of Chemistry, University of Calcutta, 92 A.P.C. Road, Kolkata, West Bengal, 700009, India
| | - Anirban Dolai
- Department of Chemistry, University of Calcutta, 92 A.P.C. Road, Kolkata, West Bengal, 700009, India
| | - Subhas Samanta
- Department of Chemistry, University of Calcutta, 92 A.P.C. Road, Kolkata, West Bengal, 700009, India
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Goual N, Métivier R, Laurent G, Retailleau P, Nakatani K, Xie J. Tuning the Thermal Stability of Tetra-o-chloroazobenzene Derivatives by Transforming Push-Pull to Push-Push Systems. Chemistry 2024; 30:e202401737. [PMID: 39224068 DOI: 10.1002/chem.202401737] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2024] [Indexed: 09/04/2024]
Abstract
Molecular photoswitches provide interesting tools to reversibly control various biological functions with light. Thanks to its small size and easy introduction into the biomolecules, azobenzene derivatives have been widely employed in the field of photopharmacology. All visible-light switchable azobenzenes with controllable thermostability are highly demanded. Based on the reported tetra-o-chloroazobenzenes, we synthesized push-pull systems, by introducing dialkyl amine and nitro groups as strong electron-donating and electron-withdrawing groups on the para-positions, and then transformed to push-push systems by a simple reduction step. The developed push-pull and push-push tetra-o-chloroazobenzene derivatives displayed excellent photoswitching properties, as previously reported. The half-life of the Z-isomers can be tuned from milliseconds for the push-pull system to several hours for the push-push system. The n-π* and π-π* transitions have better resolution in the push-push molecules, and excitation at different wavelengths can tune the E/Z ratio at the photostationary state. For one push-pull molecule, structure and absorption spectra obtained from theoretical calculations are compared with experimental data, along with data on the push-push counterpart.
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Affiliation(s)
- Nawel Goual
- Photophysique et Photochimie Supramoléculaires et Macromoléculaires, ENS Paris-Saclay, CNRS, University Paris-Saclay, Gif-sur-Yvette, 91190, France
| | - Rémi Métivier
- Photophysique et Photochimie Supramoléculaires et Macromoléculaires, ENS Paris-Saclay, CNRS, University Paris-Saclay, Gif-sur-Yvette, 91190, France
| | - Guillaume Laurent
- Photophysique et Photochimie Supramoléculaires et Macromoléculaires, ENS Paris-Saclay, CNRS, University Paris-Saclay, Gif-sur-Yvette, 91190, France
| | - Pascal Retailleau
- University Paris-Saclay, CNRS, Institut de Chimie des Substances Naturelles, UPR 2301, Gif-sur-Yvette, 91198, France
| | - Keitaro Nakatani
- Photophysique et Photochimie Supramoléculaires et Macromoléculaires, ENS Paris-Saclay, CNRS, University Paris-Saclay, Gif-sur-Yvette, 91190, France
| | - Juan Xie
- Photophysique et Photochimie Supramoléculaires et Macromoléculaires, ENS Paris-Saclay, CNRS, University Paris-Saclay, Gif-sur-Yvette, 91190, France
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6
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Dang T, Zhang ZY, Li T. Visible-Light-Activated Heteroaryl Azoswitches: Toward a More Colorful Future. J Am Chem Soc 2024; 146:19609-19620. [PMID: 38991225 DOI: 10.1021/jacs.4c03135] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/13/2024]
Abstract
Azobenzenes (Ph-N═N-Ph) are known as the most widely studied molecular photoswitches, and the recent rise of azoheteroarenes (Het-N═N-Ph or Het-N═N-Het) offers great opportunities to advance this already mature field. A common limitation is that azo-switches generally require harmful UV light for activation, which hinders their application across various fields. Despite great efforts in developing visible-light azobenzenes over the past few decades, the potential of visible-light heteroaryl azoswitches remains largely unexplored. This Perspective summarizes the state-of-the-art advancements in visible-light heteroaryl azoswitches, covering molecular design strategies, the structure-property relationship, and potential applications. We highlight the distinctive advantages of azoheteroarenes over azobenzenes in the research and development of visible-light switches. Furthermore, we discuss the opportunities and challenges in this emerging field and propose potential solutions to address crucial issues such as spectral red-shift and thermal half-life. Through this Perspective paper, we aim to provide inspiration for further exploration in this field, in anticipation of the growing prosperity and bright future of visible-light azoheteroarene photoswitches.
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Affiliation(s)
- Tongtong Dang
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, Shanghai Key Laboratory of Electrical Insulation and Thermal Aging, Key Laboratory of Thin Film and Microfabrication (Ministry of Education), Shanghai Jiao Tong University, Shanghai 200240, China
| | - Zhao-Yang Zhang
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, Shanghai Key Laboratory of Electrical Insulation and Thermal Aging, Key Laboratory of Thin Film and Microfabrication (Ministry of Education), Shanghai Jiao Tong University, Shanghai 200240, China
| | - Tao Li
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules, Shanghai Key Laboratory of Electrical Insulation and Thermal Aging, Key Laboratory of Thin Film and Microfabrication (Ministry of Education), Shanghai Jiao Tong University, Shanghai 200240, China
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7
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Steinmüller SAM, Odaybat M, Galli G, Prischich D, Fuchter MJ, Decker M. Arylazobenzimidazoles: versatile visible-light photoswitches with tuneable Z-isomer stability. Chem Sci 2024; 15:5360-5367. [PMID: 38577348 PMCID: PMC10988581 DOI: 10.1039/d3sc05246j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2023] [Accepted: 02/28/2024] [Indexed: 04/06/2024] Open
Abstract
Benzimidazole heterocycles are of great importance in medicinal chemistry due to their applicability to a wide range of pharmacological targets, therefore representing a prototypical "privileged structure". In photopharmacology, azoheteroarene photoswitches have emerged as valuable tools for a variety of applications due to the high tuneability of their photophysical properties. Benzimidazole-based photoswitches could therefore enable the optically-controlled investigation of many pharmacological targets and find application in materials science. Here we report a combined experimental and computational investigation of such arylazobenzimidazoles, which allowed us to identify derivatives with near-quantitative bidirectional photoswitching using visible light and highly tuneable Z-isomer stability. We further demonstrate that arylazobenzimidazoles bearing a free benzimidazole N-H group not only exhibit efficient bidirectional photoswitching, but also excellent thermal Z-isomer stability, contrary to previously reported fast-relaxing Z-isomers of N-H azoheteroarenes. Finally, we describe derivatives which can be reversibly isomerized with cyan and red light, thereby enabling significantly "red-shifted" photocontrol over prior azoheteroarenes. The understanding gained in this study should enable future photopharmacological efforts by employing photoswitches based on the privileged benzimidazole structure.
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Affiliation(s)
- Sophie A M Steinmüller
- Pharmazeutische und Medizinische Chemie, Institut für Pharmazie und Lebensmittelchemie, Julius-Maximilians-Universität Würzburg Am Hubland 97074 Würzburg Germany
| | - Magdalena Odaybat
- Department of Chemistry, Molecular Sciences Research Hub, White City Campus, Imperial College London London W12 0BZ UK
| | - Giulia Galli
- Pharmazeutische und Medizinische Chemie, Institut für Pharmazie und Lebensmittelchemie, Julius-Maximilians-Universität Würzburg Am Hubland 97074 Würzburg Germany
| | - Davia Prischich
- Department of Chemistry, Molecular Sciences Research Hub, White City Campus, Imperial College London London W12 0BZ UK
| | - Matthew J Fuchter
- Department of Chemistry, Molecular Sciences Research Hub, White City Campus, Imperial College London London W12 0BZ UK
| | - Michael Decker
- Pharmazeutische und Medizinische Chemie, Institut für Pharmazie und Lebensmittelchemie, Julius-Maximilians-Universität Würzburg Am Hubland 97074 Würzburg Germany
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Lv Y, Ye H, You L. Multiple control of azoquinoline based molecular photoswitches. Chem Sci 2024; 15:3290-3299. [PMID: 38425524 PMCID: PMC10901508 DOI: 10.1039/d3sc05879d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2023] [Accepted: 01/18/2024] [Indexed: 03/02/2024] Open
Abstract
Multi-addressable molecular switches with high sophistication are creating intensive interest, but are challenging to control. Herein, we incorporated ring-chain dynamic covalent sites into azoquinoline scaffolds for the construction of multi-responsive and multi-state switching systems. The manipulation of ring-chain equilibrium by acid/base and dynamic covalent reactions with primary/secondary amines allowed the regulation of E/Z photoisomerization. Moreover, the carboxyl and quinoline motifs provided recognition handles for the chelation of metal ions and turning off photoswitching, with otherwise inaccessible Z-isomer complexes obtained via the change of stimulation sequence. Particularly, the distinct metal binding behaviors of primary amine and secondary amine products offered a facile way for modulating E/Z switching and dynamic covalent reactivity. As a result, multiple control of azoarene photoswitches was accomplished, including light, pH, metal ions, and amine nucleophiles, with interplay between diverse stimuli further enabling addressable multi-state switching within reaction networks. The underlying structural and mechanistic insights were elucidated, paving the way for the creation of complex switching systems, molecular assemblies, and intelligent materials.
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Affiliation(s)
- Youming Lv
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences Fuzhou 350002 China
- University of Chinese Academy of Sciences Beijing 100049 China
| | - Hebo Ye
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences Fuzhou 350002 China
| | - Lei You
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences Fuzhou 350002 China
- University of Chinese Academy of Sciences Beijing 100049 China
- Fujian Science & Technology Innovation Laboratory for Optoelectronic Information of China Fuzhou 350108 China
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